[annotation] ISS for hydrophobicity

[Karen Christie]

Hi Doug,

At the Jan 07 GO meeting we did agree to require that the with column be 
filled for ISS.

We also agreed that it would be allowed to put the name of a method in the 
with field. My example at the time was various snoRNA predictions based on 
sequence. However, we have not yet worked out the specifics of how to be 
able to include names of methods in the with column.

I am writing up a summary of the issue to send to the GO list to start the 
discussion before I go on maternity leave (last day working till next year 
will be Sept 14), so if you send me the paper and the specifics of what 
you would like to be able to annotate from the paper, I'll include it in 
my item.

thanks,

-Karen


On Tue, 28 Aug 2007, Doug howe wrote:

> I want to annotate to 'integral to membrane' based on the authors citing 
> hydrophobicity analysis and concluding that it is a transmembrane protein. I 
> know we have discussed this before...
> What is the current policy on this annotation?  ISS using nothing in the 
> 'with' field (this appears to be disallowed at the moment)?
> -Doug
>