[annotation] osmosensor - SF 1873095

Jodi Hirschman jodi at genome.Stanford.EDU
Thu Jan 17 08:01:17 PST 2008


Hi,

I proposed a definition and added it to the SF item:
> https://sourceforge.net/tracker/index.php? 
> func=detail&aid=1873095&group_id=36855&atid=440764

but I also question whether this term is legit.  Seems like BP terms  
like GO: 47484 'regulation of response to osmotic stress' are better.

Jodi


On Jan 17, 2008, at 8:38 AM, Midori Harris wrote:

> Hi,
>
> In SF 1873095, Donghui has requested a definition for osmosensor  
> activity (GO:0005034). Can those who have used this term in  
> annotations -- MGI, RGD, SGD and TAIR -- suggest anything? I'm even  
> wondering whether it's a legitimate molecular function term, since  
> a quick look at PubMed search results indicates that histidine  
> kinases and adenylyl cyclases (possibly among other things) can be  
> referred to as "osmosensors".
>
> This is the SF item:
> https://sourceforge.net/tracker/index.php? 
> func=detail&aid=1873095&group_id=36855&atid=440764
>
> These are the gene products currently annotated to GO:0005034:
> MGI	MGI:1926945	Trpv4	(2 lines in file)
> RGD	RGD:69337	Trpv4	(2)
> SGD	S000002828	HKR1
> SGD	S000003246	MSB2
> SGD	S000000920	SHO1
> SGD	S000001409	SLN1	(2)
> TAIR	gene:3713570	ATHK1
>
> Thanks,
> Midori




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