[Annotation] gain of function mutants
Doug howe
dhowe at cs.uoregon.edu
Fri Jun 6 12:36:05 PDT 2008
Do you curate GO from gain of function mutants like Tg lines that
express a gene in a tissue specific fashion? Sometimes this seems
appropriate if the gene being expressed is normally present in the
tissues being examined at the time of development when the Tg is
active. In other cases it seems like the Tg is just a tool to study a
pathway or something. For example authors want to study the role of bmp
signaling in heart development so the express bmp2b in the cardiac
progenitors. If this has an effect on heart development, do you
annotate bmp2b as such or not? Likewise if they express nog3 (a bmp
signaling antagonist). If nog3 expression has an effect upon heart
development do you annotate nog3 as such?
--
Doug Howe, Ph.D.
ZFIN Scientific Curator
Zebrafish Nomenclature Coordinator
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