[Annotation] annotating ribosomal proteins

Rama Balakrishnan rama at genome.stanford.edu
Tue Jun 17 15:50:35 PDT 2008


Hi,

I have couple of ribosomal proteins to annotate as part of the ref- 
genome curation project. Turns out that there is no direct  
experimental evidence showing that these proteins are involved in  
translation. Almost all the studies purify the ribosome from yeast and  
identify the subunits by one or more techniques.

I can do IDA for CC annotation, that is straightforward. Is IDA for  
function annotation- structural constituent of ribsomome okay? What  
about BP? I can do IC from the CC term, but that is not direct  
experimental evidence. What do you all think?

Thanks for your time,

Rama



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