[Annotation] obsolete/secondary IDs in translation files

[E Dimmer]

Hi Doug,

We (GOA) corrects the SPKW2GO mapping on a monthly basis - Dan sends an 
error report just before our release (I believe that Amelia looks after 
the EC2GO mapping and so will have a different system).
InterPro similarly receives a similar report from Dan for InterPro2GO, 
however as Jen mentioned, the group is currently reorganising how they 
will deal with both the sanity checks and sourceforge queries, therefore 
they may have a bit of a backlog. I'll look into it.

Cheers,
Emily


Doug howe wrote:
> Is this done on a continual basis, or monthly, or sporadic?  Just 
> curious.  When we apply the translations here I get reports of these bad 
> translations.  I assume they get the same type of thing to facilitate 
> corrections?  At the moment the spkw2go and ec2go error report only 
> contains a handfull of bad translations, but the ip2go translation error 
> report appears rather meaty...
> -Doug
>
> Jennifer Deegan (nee Clark) wrote:
>   
>> Hi Doug,
>>
>> The GOA people just left this minute, but as I understand it these are 
>> all done here by GOA or InterPro staff.
>>
>> Jen
>>
>> Doug howe wrote:
>>
>>     
>>> How are obsolete/secondary GO IDs that may creep into the 
>>> interpro2go, ec2go, and spkw2go translation files located and corrected?
>>> -Doug
>>> _______________________________________________
>>> Annotation mailing list
>>> Annotation at geneontology.org
>>> http://fafner.stanford.edu/mailman/listinfo/annotation
>>>  
>>>
>>>       
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> Annotation mailing list
> Annotation at geneontology.org
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    Emily Dimmer Ph.D.
    GOA Coordinator
    EMBL-EBI
    Wellcome Trust Genome Campus
    Hinxton
    Cambridge CB10 1SD, U.K.
    Tel:     +44 1223 494654
    Fax:    +44 1223 494468
    email:  edimmer at ebi.ac.uk
    URL:    http://www.ebi.ac.uk/goa