<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div>HI</div><div><br></div><div>If you can get the sequence of your genes, then you can BLAST them within AmiGO and tranfer/map the GO annotations based on the best hits. </div><div>URL for AmiGO Blast-</div><div><a href="http://amigo.geneontology.org/cgi-bin/amigo/blast.cgi?session_id=2694amigo1240334215">http://amigo.geneontology.org/cgi-bin/amigo/blast.cgi?session_id=2694amigo1240334215</a></div><div><br></div><div>Hope this helps. Please let us know if you have questions.</div><div><br></div><div>Best,</div><div><br></div><div>Rama</div><div><br></div><br><div><div>On Apr 20, 2009, at 2:17 PM, Mike wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div><br>I wonder if someone can share their experience in mapping genes to GO. The information I have for the genes are their symbol name like ANAPC4 and the accession number like NM_013367.2. I have a bunch of genes (more than 2000) like this. Any suggestions are appreciated. <br><br>Thanks,<br><br>Mike<br><br><br><br><br>_______________________________________________<br>Annotation mailing list<br><a href="mailto:Annotation@geneontology.org">Annotation@geneontology.org</a><br>http://fafner.stanford.edu/mailman/listinfo/annotation<br></div></blockquote></div><br><div apple-content-edited="true"> <span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; -webkit-text-decorations-in-effect: none; text-indent: 0px; -webkit-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><span class="Apple-style-span" style="border-collapse: separate; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; -webkit-text-decorations-in-effect: none; text-indent: 0px; -webkit-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; ">+-----o--o ---------------------------------------------------------------</font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> </span>o-o<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> Rama Balakrishnan Ph.D</span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> </span>O<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> Senior Scientific Curator</span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>o-o<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> Saccharomyces Genome Database </span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>o---o<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> Stanford University</span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> </span>o----o<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> Stanford, CA 94305-5120</span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> </span>O-----O<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> Ph: 650.725.8956 Fax: 650.723.7016</span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>0--o<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span>email: <a href="mailto:rama@genome.stanford.edu">rama@genome.stanford.edu</a></span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>O<span class="Apple-converted-space"> </span><span class="Apple-converted-space"> Website: <a href="http://www.yeastgenome.org">http://www.yeastgenome.org</a> </span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; "><span class="Apple-converted-space"> <span class="Apple-converted-space"> </span></span>o-o<span class="Apple-converted-space"> SGD Wiki- <a href="http://wiki.yeastgenome.org">http://wiki.yeastgenome.org</a></span></font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><font face="Helvetica" size="3" style="font: normal normal normal 12px/normal Helvetica; ">+- o---o -----------------------------------------------------------------</font></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><br class="webkit-block-placeholder"></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><br class="webkit-block-placeholder"></p><p style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 12px/normal Helvetica; 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