[go-diff] GO update 08/14/2007

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.453 by 5.454

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0032509
* Created object of type obo:TERM with id GO:0032510
* Created object of type obo:TERM with id GO:0032511
* Created object of type obo:TERM with id GO:0032512
* Created object of type obo:TERM with id GO:0032513
* Created object of type obo:TERM with id GO:0032514
* Created object of type obo:TERM with id GO:0032515
* Created object of type obo:TERM with id GO:0032516
* Populated new object GO:0032509 (macro)
  * Changed name of GO:0032509 from "<new term>" to "endosome transport via multivesicular body sorting pathway"
  * Set definition of GO:0032509 to "The directed movement of substances from endosomes to lysosomes or vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the target compartment."
  * Added definition dbxref GOC:mah to GO:0032509
  * Added definition dbxref PMID:12461556 to GO:0032509
  * Added definition dbxref PMID:16689637 to GO:0032509
  * Added synonym "endosome transport via MVB sorting pathway" to GO:0032509
  * Changed synonym scope of GO:0032509 from "Related" to "Exact"
  * Copied GO:0032509 to GO:0016197 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032509
* Populated new object GO:0032510 (macro)
  * Changed name of GO:0032510 from "<new term>" to "endosome to lysosome transport via multivesicular body sorting pathway"
  * Set definition of GO:0032510 to "The directed movement of substances from endosomes to lysosomes by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the lysosome."
  * Added definition dbxref GOC:mah to GO:0032510
  * Added definition dbxref PMID:12461556 to GO:0032510
  * Added definition dbxref PMID:16689637 to GO:0032510
  * Added synonym "endosome to lysosome transport via MVB sorting pathway" to GO:0032510
  * Changed synonym scope of GO:0032510 from "Related" to "Exact"
  * Copied GO:0032510 to GO:0045022 with type OBO_REL:is_a
  * Copied GO:0032510 to GO:0032509 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032510
* Populated new object GO:0032511 (macro)
  * Changed name of GO:0032511 from "<new term>" to "late endosome to vacuole transport via multivesicular body sorting pathway"
  * Set definition of GO:0032511 to "The directed movement of substances from endosomes to vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the vacuole."
  * Added definition dbxref GOC:mah to GO:0032511
  * Added definition dbxref PMID:12461556 to GO:0032511
  * Added definition dbxref PMID:16689637 to GO:0032511
  * Added synonym "endosome to vacuole transport via MVB sorting pathway" to GO:0032511
  * Changed synonym scope of GO:0032511 from "Related" to "Exact"
  * Copied GO:0032511 to GO:0032509 with type OBO_REL:is_a
  * Copied GO:0032511 to GO:0045324 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032511
* Populated new object GO:0032512 (macro)
  * Changed name of GO:0032512 from "<new term>" to "regulation of protein phosphatase type 2B activity"
  * Set definition of GO:0032512 to "Any process that modulates the activity of the enzyme protein phosphatase type 2B."
  * Added definition dbxref GOC:mah to GO:0032512
  * Added synonym "regulation of calcineurin activity" to GO:0032512
  * Changed synonym scope of GO:0032512 from "Related" to "Exact"
  * Copied GO:0032512 to GO:0043666 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032512
* Populated new object GO:0032513 (macro)
  * Changed name of GO:0032513 from "<new term>" to "negative regulation of protein phosphatase type 2B activity"
  * Set definition of GO:0032513 to "Any process that stops or reduces the activity of the enzyme protein phosphatase type 2B."
  * Added definition dbxref GOC:mah to GO:0032513
  * Added GO:0032513 to category gosubset_prok
  * Added synonym "down regulation of protein phosphatase type 2B activity" to GO:0032513
  * Changed synonym scope of GO:0032513 from "Related" to "Exact"
  * Added synonym "down-regulation of protein phosphatase type 2B activity" to GO:0032513
  * Changed synonym scope of GO:0032513 from "Related" to "Exact"
  * Added synonym "downregulation of protein phosphatase type 2B activity" to GO:0032513
  * Changed synonym scope of GO:0032513 from "Related" to "Exact"
  * Added synonym "inhibition of protein phosphatase type 2B activity" to GO:0032513
  * Changed synonym scope of GO:0032513 from "Related" to "Narrow"
  * Added synonym "negative regulation of calcineurin activity" to GO:0032513
  * Changed synonym scope of GO:0032513 from "Related" to "Exact"
  * Copied GO:0032513 to GO:0051004 with type OBO_REL:is_a
  * Copied GO:0032513 to GO:0032515 with type OBO_REL:is_a
  * Copied GO:0032513 to GO:0032512 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032513
* Populated new object GO:0032514 (macro)
  * Changed name of GO:0032514 from "<new term>" to "positive regulation of protein phosphatase type 2B activity"
  * Set definition of GO:0032514 to "Any process that activates or increases the activity of the enzyme protein phosphatase type 2B."
  * Added definition dbxref GOC:mah to GO:0032514
  * Added GO:0032514 to category gosubset_prok
  * Added synonym "activation of protein phosphatase type 2B activity" to GO:0032514
  * Changed synonym scope of GO:0032514 from "Related" to "Narrow"
  * Added synonym "calcineurin activation" to GO:0032514
  * Changed synonym scope of GO:0032514 from "Related" to "Exact"
  * Added synonym "positive regulation of calcineurin activity" to GO:0032514
  * Changed synonym scope of GO:0032514 from "Related" to "Exact"
  * Added synonym "stimulation of protein phosphatase type 2B activity" to GO:0032514
  * Changed synonym scope of GO:0032514 from "Related" to "Narrow"
  * Added synonym "up regulation of protein phosphatase type 2B activity" to GO:0032514
  * Changed synonym scope of GO:0032514 from "Related" to "Exact"
  * Added synonym "up-regulation of protein phosphatase type 2B activity" to GO:0032514
  * Changed synonym scope of GO:0032514 from "Related" to "Exact"
  * Added synonym "upregulation of protein phosphatase type 2B activity" to GO:0032514
  * Changed synonym scope of GO:0032514 from "Related" to "Exact"
  * Copied GO:0032514 to GO:0051004 with type OBO_REL:is_a
  * Copied GO:0032514 to GO:0032516 with type OBO_REL:is_a
  * Copied GO:0032514 to GO:0032512 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032514
* Populated new object GO:0032515 (macro)
  * Changed name of GO:0032515 from "<new term>" to "negative regulation of phosphoprotein phosphatase activity"
  * Set definition of GO:0032515 to "Any process that stops or reduces the activity of a phosphoprotein phosphatase."
  * Added definition dbxref GOC:mah to GO:0032515
  * Added GO:0032515 to category gosubset_prok
  * Added synonym "down regulation of phosphoprotein phosphatase activity" to GO:0032515
  * Changed synonym scope of GO:0032515 from "Related" to "Exact"
  * Added synonym "down-regulation of phosphoprotein phosphatase activity" to GO:0032515
  * Changed synonym scope of GO:0032515 from "Related" to "Exact"
  * Added synonym "downregulation of phosphoprotein phosphatase activity" to GO:0032515
  * Changed synonym scope of GO:0032515 from "Related" to "Exact"
  * Added synonym "inhibition of phosphoprotein phosphatase activity" to GO:0032515
  * Changed synonym scope of GO:0032515 from "Related" to "Narrow"
  * Copied GO:0032515 to GO:0051346 with type OBO_REL:is_a
  * Copied GO:0032515 to GO:0051004 with type OBO_REL:is_a
  * Copied GO:0032515 to GO:0043666 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032515
* Populated new object GO:0032516 (macro)
  * Changed name of GO:0032516 from "<new term>" to "positive regulation of phosphoprotein phosphatase activity"
  * Set definition of GO:0032516 to "Any process that activates or increases the activity of a phosphoprotein phosphatase."
  * Added definition dbxref GOC:mah to GO:0032516
  * Added GO:0032516 to category gosubset_prok
  * Added synonym "activation of phosphoprotein phosphatase activity" to GO:0032516
  * Changed synonym scope of GO:0032516 from "Related" to "Narrow"
  * Added synonym "stimulation of phosphoprotein phosphatase activity" to GO:0032516
  * Changed synonym scope of GO:0032516 from "Related" to "Narrow"
  * Added synonym "up regulation of phosphoprotein phosphatase activity" to GO:0032516
  * Changed synonym scope of GO:0032516 from "Related" to "Exact"
  * Added synonym "up-regulation of phosphoprotein phosphatase activity" to GO:0032516
  * Changed synonym scope of GO:0032516 from "Related" to "Exact"
  * Added synonym "upregulation of phosphoprotein phosphatase activity" to GO:0032516
  * Changed synonym scope of GO:0032516 from "Related" to "Exact"
  * Copied GO:0032516 to GO:0043666 with type OBO_REL:is_a
  * Copied GO:0032516 to GO:0051004 with type OBO_REL:is_a
  * Copied GO:0032516 to GO:0051345 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032516
* Added synonym "melibiase activity" to GO:0004557
* Changed synonym scope of GO:0004557 from "Related" to "Exact"
* Deleted synonym "multivesicular body sorting" from GO:0008333
* Deleted synonym "MVB sorting" from GO:0008333
* Changed name of GO:0015638 from "microcin uptake permease activity - obsolete this?" to "microcin uptake permease activity"
* Changed name of GO:0017091 from "AU-specific RNA binding" to "AU-rich element binding"
* Added synonym "ARE binding" to GO:0017091
* Changed synonym scope of GO:0017091 from "Related" to "Exact"
* Added synonym "AU-specific RNA binding" to GO:0017091
* Changed synonym scope of GO:0017091 from "Related" to "Exact"
* Changed definition of GO:0033252 from "Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of a beta-lactam to yield a substituted beta-amino acid." to "Any process that modulates the frequency, rate or extent of beta-lactamase activity, the hydrolysis of a beta-lactam to yield a substituted beta-amino acid."
* Copied GO:0043328 to GO:0032511 with type OBO_REL:is_a
* Deleted synonym "multivesicular body sorting" from GO:0045324
* Deleted synonym "MVB sorting" from GO:0045324
* Deleted synonym "PVC to Golgi pathway" from GO:0045324