[go-diff] GO update 08/16/2007

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.456 by 5.457

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0010435
* Created object of type obo:TERM with id GO:0010436
* Created object of type obo:TERM with id GO:0010437
* Created object of type obo:TERM with id GO:0010438
* Created object of type obo:TERM with id GO:0010439
* Populated new object GO:0010435 (macro)
  * Changed name of GO:0010435 from "<new term>" to "3-oxo-2-(2'-pentenyl)cyclopentane-1-octanoic acid (OPC-8:0) CoA ligase activity"
  * Set definition of GO:0010435 to "Catalysis of the reaction: ATP + 3-oxo-2-(2'-pentenyl)-cyclopentane-1-octanoic acid (OPC-8:0) + CoA = AMP + diphosphate + 3-oxo-2-(2'-pentenyl)- cyclopentane-1-octanoyl-CoA."
  * Added definition dbxref PMID:16963437 to GO:0010435
  * Added synonym "OPC-8:0 CoA ligase activity" to GO:0010435
  * Copied GO:0010435 to GO:0016405 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0010435
* Populated new object GO:0010436 (macro)
  * Changed name of GO:0010436 from "<new term>" to "carotenoid dioxygenase activity"
  * Set definition of GO:0010436 to "Catalysis of the oxidative cleavage of carotenoids."
  * Added definition dbxref PMID:16459333 to GO:0010436
  * Added synonym "carotenoid-cleaving dioxygenase" to GO:0010436
  * Copied GO:0010436 to GO:0016702 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0010436
* Populated new object GO:0010437 (macro)
  * Changed name of GO:0010437 from "<new term>" to "9,10 (9', 10')-carotenoid-cleaving dioxygenase activity"
  * Set definition of GO:0010437 to "Catalysis of the oxidative cleavage of carotenoids at the (9, 10) and/or (9', 10') double bond."
  * Added definition dbxref PMID:16459333 to GO:0010437
  * Copied GO:0010437 to GO:0010436 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0010437
* Populated new object GO:0010438 (macro)
  * Changed name of GO:0010438 from "<new term>" to "cellular response to sulfur starvation"
  * Set definition of GO:0010438 to "A change in the state or activity of a cell (in terms of enzyme production, gene expression, etc.) as a result of deprivation of sulfur."
  * Added definition dbxref PMID:17420480 to GO:0010438
  * Copied GO:0010438 to GO:0009267 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010438
* Populated new object GO:0010439 (macro)
  * Changed name of GO:0010439 from "<new term>" to "regulation of glucosinolate biosynthetic process"
  * Set definition of GO:0010439 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae."
  * Added definition dbxref PMID:17420480 to GO:0010439
  * Copied GO:0010439 to GO:0019761 with type part_of
  * Copied GO:0010439 to GO:0031326 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010439
* Deleted GO:0045549 --OBO_REL:is_a--> GO:0016702
* Copied GO:0045549 to GO:0010436 with type OBO_REL:is_a