[go-diff] GO update 08/23/2007

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.463 by 5.464

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0032543
* Created object of type obo:TERM with id GO:0032544
* Created object of type obo:TERM with id GO:0032545
* Populated new object GO:0032543 (macro)
  * Changed name of GO:0032543 from "<new term>" to "mitochondrial translation"
  * Set definition of GO:0032543 to "The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code."
  * Added definition dbxref GOC:go_curators to GO:0032543
  * Added GO:0032543 to category goslim_generic
  * Added GO:0032543 to category goslim_plant
  * Added GO:0032543 to category goslim_yeast
  * Added GO:0032543 to category gosubset_prok
  * Added synonym "mitochondrial protein anabolism" to GO:0032543
  * Changed synonym scope of GO:0032543 from "Related" to "Exact"
  * Added synonym "mitochondrial protein biosynthesis" to GO:0032543
  * Changed synonym scope of GO:0032543 from "Related" to "Exact"
  * Added synonym "mitochondrial protein formation" to GO:0032543
  * Changed synonym scope of GO:0032543 from "Related" to "Exact"
  * Added synonym "mitochondrial protein synthesis" to GO:0032543
  * Changed synonym scope of GO:0032543 from "Related" to "Exact"
  * Added synonym "mitochondrial protein translation" to GO:0032543
  * Changed synonym scope of GO:0032543 from "Related" to "Exact"
  * Copied GO:0032543 to GO:0007005 with type OBO_REL:is_a
  * Copied GO:0032543 to GO:0006412 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032543
* Populated new object GO:0032544 (macro)
  * Changed name of GO:0032544 from "<new term>" to "plastid translation"
  * Set definition of GO:0032544 to "The chemical reactions and pathways resulting in the formation of a protein in a plastid. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the plastid has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code."
  * Added definition dbxref GOC:go_curators to GO:0032544
  * Added GO:0032544 to category goslim_generic
  * Added GO:0032544 to category goslim_plant
  * Added GO:0032544 to category goslim_yeast
  * Added GO:0032544 to category gosubset_prok
  * Added synonym "plastid protein anabolism" to GO:0032544
  * Changed synonym scope of GO:0032544 from "Related" to "Exact"
  * Added synonym "plastid protein biosynthesis" to GO:0032544
  * Changed synonym scope of GO:0032544 from "Related" to "Exact"
  * Added synonym "plastid protein formation" to GO:0032544
  * Changed synonym scope of GO:0032544 from "Related" to "Exact"
  * Added synonym "plastid protein synthesis" to GO:0032544
  * Changed synonym scope of GO:0032544 from "Related" to "Exact"
  * Added synonym "plastid protein translation" to GO:0032544
  * Changed synonym scope of GO:0032544 from "Related" to "Exact"
  * Copied GO:0032544 to GO:0009657 with type OBO_REL:is_a
  * Copied GO:0032544 to GO:0006412 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0032544
* Populated new object GO:0032545 (macro)
  * Changed name of GO:0032545 from "<new term>" to "CURI complex"
  * Set definition of GO:0032545 to "A protein complex that is involved in the transcription of ribosomal genes. In Saccharomyces this complex consists of Ckb2p, Utp22p, Rrp7p andIfh1p."
  * Added definition dbxref PMID:17452446 to GO:0032545
  * Copied GO:0032545 to GO:0044428 with type OBO_REL:is_a
  * Copied GO:0032545 to GO:0043234 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0032545
* Added synonym "mitochondrial transcription" to GO:0006390
* Changed synonym scope of GO:0006390 from "Related" to "Exact"
* Copied GO:0006390 to GO:0007005 with type OBO_REL:is_a
* Changed definition of GO:0010445 from "A small round nuclear body, measuring 0.2-0.8 microns in
diameter that is diffusely distributed throughout the nucleoplasm. Several proteins known to be involved in miRNA processing have been localized to these structures. D-bodies are thought to be involved in primary-miRNA processing and/or storage/assembly of miRNA processing complexes." to "A small round nuclear body, measuring 0.2-0.8 microns in diameter that is diffusely distributed throughout the nucleoplasm. Several proteins known to be involved in miRNA processing have been localized to these structures. D-bodies are thought to be involved in primary-miRNA processing and/or storage/assembly of miRNA processing complexes."
* Copied GO:0016998 to GO:0010382 with type OBO_REL:is_a
* Changed definition of GO:0032541 from "A cortical network of highly dynamic tubules that are juxtaposed
to the plasma membrane and undergo ring closure and tubule-branching
movements." to "A cortical network of highly dynamic tubules that are juxtaposed to the plasma membrane and undergo ring closure and tubule-branching movements."
* Added synonym "plastid transcription" to GO:0042793
* Changed synonym scope of GO:0042793 from "Related" to "Exact"
* Copied GO:0042793 to GO:0009657 with type OBO_REL:is_a