[go-diff] GO update 11/20/2007

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.558 by 5.559

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Changed definition of GO:0010467 from "The process by which a gene's coding sequence is converted into a
mature gene product or products (proteins or RNA). This includes the
production of an RNA transcript as well as any processing to produce a
mature RNA product or an mRNA (for protein-coding genes) and the
translation of that mRNA into protein. Some protein processing events may
be included when they are required to form an active form of a product from
an inactive precursor form." to "The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form."
* Changed definition of GO:0010468 from "Any process that modulates the frequency, rate or extent of gene
expression. Gene expression is the process in which a gene's coding
sequence is converted into a mature gene product or products (proteins or
RNA). This includes the
production of an RNA transcript as well as any processing to produce a
mature RNA product or an mRNA (for protein-coding genes) and the
translation of that mRNA into protein. Some protein processing events may
be included when they are required to form an active form of a product from
an inactive precursor form." to "Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form."
* Changed name of GO:0040025 from "vulval development (sensu Nematoda)" to "vulval development"
* Changed definition of GO:0040025 from "The process whose specific outcome is the progression of the vulva over time, from its formation to the mature structure. Vulval development begins during the larval stages to give rise to a fully formed vulva in the adult. As in, but not restricted to, the roundworms (Nematoda, ncbi_taxonomy_id:6231)." to "The process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult."
* Added synonym "vulval development (sensu Nematoda)" to GO:0040025
* Changed synonym scope of GO:0040025 from "Related" to "Exact"
* Changed name of GO:0040026 from "positive regulation of vulval development (sensu Nematoda)" to "positive regulation of vulval development"
* Changed definition of GO:0040026 from "Any process that activates or increases the frequency, rate or extent of development of the vulva, as in, but not restricted to, the roundworms (Nematoda, ncbi_taxonomy_id:6231)." to "Any process that activates or increases the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult."
* Added definition dbxref GOC:kva to GO:0040026
* Added synonym "positive regulation of vulval development (sensu Nematoda)" to GO:0040026
* Changed synonym scope of GO:0040026 from "Related" to "Exact"
* Changed name of GO:0040027 from "negative regulation of vulval development (sensu Nematoda)" to "negative regulation of vulval development"
* Changed definition of GO:0040027 from "Any process that stops, prevents or reduces the frequency, rate or extent of development of the vulva, as in, but not restricted to, the roundworms (Nematoda, ncbi_taxonomy_id:6231)." to "Any process that stops, prevents or reduces the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult."
* Added definition dbxref GOC:kva to GO:0040027
* Added synonym "negative regulation of vulval development (sensu Nematoda)" to GO:0040027
* Changed synonym scope of GO:0040027 from "Related" to "Exact"
* Changed name of GO:0040028 from "regulation of vulval development (sensu Nematoda)" to "regulation of vulval development"
* Changed definition of GO:0040028 from "Any process that modulates the frequency, rate or extent of development of the vulva. As in, but not restricted to, the roundworms (Nematoda, ncbi_taxonomy_id:6231)." to "Any process that modulates the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult."
* Added definition dbxref GOC:kva to GO:0040028
* Added synonym "regulation of vulval development (sensu Nematoda)" to GO:0040028
* Changed synonym scope of GO:0040028 from "Related" to "Exact"
* Changed synonym scope of GO:0051091 from "Narrow" to "Exact"