[go-diff] GO update 10/09/2007

Tue Oct 9 21:30:41 PDT 2007

OBODIFF of gene_ontology_edit.obo version 5.494 by 5.497

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Changed name of GO:0000335 from "negative regulation of DNA transposition" to "negative regulation of transposition, DNA mediated"
* Added definition dbxref GOC:dph to GO:0000335
* Added synonym "negative regulation of DNA transposition" to GO:0000335
* Added general dbxref GOC:dph to synonym negative regulation of DNA transposition of GO:0000335
* Changed synonym scope of GO:0000335 from "Related" to "Exact"
* Changed name of GO:0000336 from "positive regulation of DNA transposition" to "positive regulation of transposition, DNA-mediated"
* Added definition dbxref GOC:dph to GO:0000336
* Added synonym "positive regulation of DNA transposition" to GO:0000336
* Added general dbxref GOC:dph to synonym positive regulation of DNA transposition of GO:0000336
* Changed synonym scope of GO:0000336 from "Related" to "Exact"
* Changed name of GO:0000337 from "regulation of DNA transposition" to "regulation of transposition, DNA-mediated"
* Added definition dbxref GOC:dph to GO:0000337
* Added synonym "regulation of DNA transposition" to GO:0000337
* Added general dbxref GOC:dph to synonym regulation of DNA transposition of GO:0000337
* Changed synonym scope of GO:0000337 from "Related" to "Exact"
* Added synonym "DNA transposition" to GO:0006313
* Added general dbxref GOC:dph to synonym DNA transposition of GO:0006313
* Changed synonym scope of GO:0006313 from "Related" to "Exact"
* Deleted GO:0007175 --OBO_REL:is_a--> GO:0009968
* Copied GO:0007175 to GO:0042059 with type OBO_REL:is_a
* Added definition dbxref GOC:dph to GO:0007176
* Deleted GO:0007176 --part_of--> GO:0007173
* Deleted GO:0007176 --OBO_REL:is_a--> GO:0009966
* Copied GO:0007176 to GO:0042058 with type OBO_REL:is_a
* Copied GO:0007176 to GO:0065009 with type OBO_REL:is_a
* Deleted synonym "protein carrier activity" from GO:0008320
* Added synonym "protein carrier activity" to GO:0008565
* Changed synonym scope of GO:0008565 from "Related" to "Exact"
* Changed definition of GO:0008611 from "The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one fatty alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol." to "The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol."
* Added definition dbxref PMID:15337120 to GO:0008611
* Deleted GO:0009318 --OBO_REL:is_a--> GO:0005941
* Deleted GO:0009338 --OBO_REL:is_a--> GO:0005941
* Deleted GO:0015266 --OBO_REL:is_a--> GO:0008565
* Copied GO:0015266 to GO:0008320 with type OBO_REL:is_a
* Deleted GO:0015450 --OBO_REL:is_a--> GO:0008565
* Added definition dbxref GOC:dph to GO:0022898
* Added definition dbxref GOC:mtg_cardio to GO:0022898
* Copied GO:0022898 to GO:0032409 with type OBO_REL:is_a
* Changed name of GO:0031585 from "regulation of IP3 receptor activity" to "regulation of inositol-1,4,5-triphosphate receptor activity"
* Added definition dbxref GOC:dph to GO:0031585
* Added synonym "regulation of IP3 receptor activity" to GO:0031585
* Added general dbxref GOC:dph to synonym regulation of IP3 receptor activity of GO:0031585
* Changed synonym scope of GO:0031585 from "Related" to "Exact"
* Changed name of GO:0031586 from "negative regulation of IP3 receptor activity" to "negative regulation of inositol-1,4,5-triphosphate receptor activity"
* Added definition dbxref GOC:dph to GO:0031586
* Added synonym "negative regulation of IP3 receptor activity" to GO:0031586
* Added general dbxref GOC:dph to synonym negative regulation of IP3 receptor activity of GO:0031586
* Changed name of GO:0031587 from "positive regulation of IP3 receptor activity" to "positive regulation of inositol-1,4,5-triphosphate receptor activity"
* Added definition dbxref GOC:dph to GO:0031587
* Added synonym "positive regulation of IP3 receptor activity" to GO:0031587
* Added general dbxref GOC:dph to synonym positive regulation of IP3 receptor activity of GO:0031587
* Changed synonym scope of GO:0031587 from "Related" to "Exact"
* Changed name of GO:0032084 from "regulation of Type I restriction endodeoxyribonuclease activity" to "regulation of Type I site-specific deoxyribonuclease activity"
* Added definition dbxref GOC:dph to GO:0032084
* Added synonym "regulation of Type I restriction endodeoxyribonuclease activity" to GO:0032084
* Added general dbxref GOC:dph to synonym regulation of Type I restriction endodeoxyribonuclease activity of GO:0032084
* Changed synonym scope of GO:0032084 from "Related" to "Exact"
* Changed name of GO:0032085 from "regulation of Type II restriction endodeoxyribonuclease activity" to "regulation of Type II site-specific deoxyribonuclease activity"
* Added definition dbxref GOC:dph to GO:0032085
* Added synonym "regulation of Type II restriction endodeoxyribonuclease activity" to GO:0032085
* Added general dbxref GOC:dph to synonym regulation of Type II restriction endodeoxyribonuclease activity of GO:0032085
* Changed synonym scope of GO:0032085 from "Related" to "Exact"
* Changed name of GO:0032086 from "regulation of Type III restriction endodeoxyribonuclease activity" to "regulation of Type III site-specific deoxyribonuclease activity"
* Added definition dbxref GOC:dph to GO:0032086
* Added synonym "regulation of Type III restriction endoribonuclease activity" to GO:0032086
* Added general dbxref GOC:dph to synonym regulation of Type III restriction endoribonuclease activity of GO:0032086
* Changed synonym scope of GO:0032086 from "Related" to "Exact"
* Changed name of GO:0032087 from "regulation of Type IV restriction endodeoxyribonuclease activity" to "regulation of Type IV site-specific deoxyribonuclease activity"
* Added synonym "regulation of Type IV restriction endodeoxyribonuclease activity" to GO:0032087
* Added general dbxref GOC:dph to synonym regulation of Type IV restriction endodeoxyribonuclease activity of GO:0032087
* Changed synonym scope of GO:0032087 from "Related" to "Exact"
* Deleted GO:0032409 --OBO_REL:is_a--> GO:0050789
* Copied GO:0032409 to GO:0065009 with type OBO_REL:is_a
* Deleted GO:0032590 --OBO_REL:is_a--> GO:0031256
* Deleted GO:0032591 --OBO_REL:is_a--> GO:0031256
* Changed name of GO:0043405 from "regulation of MAPK activity" to "regulation of MAP kinase activity"
* Added definition dbxref GOC:dph to GO:0043405
* Added synonym "Regulation of MAPK activity" to GO:0043405
* Added general dbxref GOC:dph to synonym Regulation of MAPK activity of GO:0043405
* Changed synonym scope of GO:0043405 from "Related" to "Exact"
* Changed name of GO:0043406 from "positive regulation of MAPK activity" to "positive regulation of MAP kinase activity"
* Added definition dbxref GOC:dph to GO:0043406
* Changed name of GO:0043407 from "negative regulation of MAPK activity" to "negative regulation of MAP kinase activity"
* Added definition dbxref GOC:dph to GO:0043407
* Copied GO:0043487 to GO:0065008 with type OBO_REL:is_a
* Changed name of GO:0045463 from "R8 development" to "R8 cell development"
* Changed name of GO:0045467 from "R7 development" to "R7 cell development"
* Changed name of GO:0045468 from "regulation of R8 spacing" to "R8 cell spacing in compound eye"
* Changed definition of GO:0045468 from "Any process that modulates the frequency, rate or extent of the spacing of the R8 cells, ensuring that the R8 cells are selected in a precise progressive pattern so that they are evenly spaced throughout the eye disc." to "Any process that ensures that the R8 cells are selected in a precise progressive pattern so that they are evenly spaced throughout the eye disc."
* Added synonym "regulation of R8 spacing" to GO:0045468
* Added general dbxref GOC:dph to synonym regulation of R8 spacing of GO:0045468
* Changed synonym scope of GO:0045468 from "Related" to "Exact"
* Deleted GO:0045468 --OBO_REL:is_a--> GO:0050789
* Copied GO:0045468 to GO:0007389 with type OBO_REL:is_a
* Changed name of GO:0045676 from "regulation of R7 differentiation" to "regulation of R7 cell differentiation"
* Changed name of GO:0045679 from "regulation of R8 differentiation" to "regulation of R8 cell differentiation"
* Deleted GO:0045741 --OBO_REL:is_a--> GO:0009967
* Copied GO:0045741 to GO:0045742 with type OBO_REL:is_a
* Changed definition of GO:0046485 from "The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one fatty alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol." to "The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol."
* Added definition dbxref PMID:15337120 to GO:0046485
* Deleted GO:0050587 --OBO_REL:is_a--> GO:0016491
* Changed name of GO:0051083 from "cotranslational protein folding" to "'de novo' cotranslational protein folding"
* Deleted synonym "co-translational protein folding" from GO:0051083
* Added synonym "'de novo' co-translational protein folding" to GO:0051083
* Changed synonym scope of GO:0051083 from "Related" to "Exact"
* Changed name of GO:0051084 from "posttranslational protein folding" to "'de novo' posttranslational protein folding"
* Deleted synonym "post-translational protein folding" from GO:0051084
* Added synonym "'de novo' post-translational protein folding" to GO:0051084
* Changed synonym scope of GO:0051084 from "Related" to "Exact"
* Deleted GO:0051084 --OBO_REL:is_a--> GO:0006457
* Copied GO:0051084 to GO:0006458 with type OBO_REL:is_a
* Copied GO:0051090 to GO:0065009 with type OBO_REL:is_a