[Go-diff] GO update 04/02/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.748 by 5.749

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Copied GO:0000179 to GO:0008170 with type OBO_REL:is_a
* Removed GO:0000289 from category gosubset_prok
* Deleted GO:0000289 --OBO_REL:is_a--> GO:0031124
* Copied GO:0000289 to GO:0006402 with type OBO_REL:is_a
* Copied GO:0000335 to GO:0045910 with type OBO_REL:is_a
* Copied GO:0000336 to GO:0045911 with type OBO_REL:is_a
* Copied GO:0002652 to GO:0002819 with type OBO_REL:is_a
* Deleted synonym "caldesmon kinase activity" from GO:0004683
* Deleted synonym "Wnt receptor activity" from GO:0004928
* Deleted synonym "Wnt receptor activity" from GO:0004929
* Deleted synonym "secretory granule" from GO:0005803
* Deleted synonym "transport vesicle" from GO:0005803
* Deleted synonym "mating projection" from GO:0005936
* Deleted GO:0006313 --OBO_REL:is_a--> GO:0006310
* Copied GO:0007096 to GO:0010564 with type OBO_REL:is_a
* Deleted synonym "positive regulation of JNK activity" from GO:0007257
* Deleted synonym "positive regulation of JUNK activity" from GO:0007257
* Deleted GO:0007587 --OBO_REL:is_a--> GO:0005975
* Copied GO:0007587 to GO:0007586 with type OBO_REL:is_a
* Deleted GO:0007611 --OBO_REL:is_a--> GO:0032501
* Deleted GO:0007632 --OBO_REL:is_a--> GO:0032501
* Copied GO:0008988 to GO:0008170 with type OBO_REL:is_a
* Copied GO:0008989 to GO:0008170 with type OBO_REL:is_a
* Copied GO:0008990 to GO:0008170 with type OBO_REL:is_a
* Deleted synonym "capsule" from GO:0009278
* Copied GO:0009383 to GO:0008169 with type OBO_REL:is_a
* Deleted GO:0010467 --OBO_REL:is_a--> GO:0009987
* Copied GO:0010467 to GO:0008150 with type OBO_REL:is_a
* Deleted GO:0010468 --OBO_REL:is_a--> GO:0050794
* Copied GO:0010468 to GO:0050789 with type OBO_REL:is_a
* Copied GO:0010503 to GO:0032108 with type OBO_REL:is_a
* Copied GO:0010520 to GO:0010564 with type OBO_REL:is_a
* Copied GO:0010535 to GO:0050731 with type OBO_REL:is_a
* Deleted GO:0015385 --OBO_REL:is_a--> GO:0015299
* Deleted definition dbxref PMID:17511809 from GO:0015616
* Copied GO:0019607 to GO:0042135 with type OBO_REL:is_a
* Copied GO:0019787 to GO:0003824 with type OBO_REL:is_a
* Deleted GO:0022900 --OBO_REL:is_a--> GO:0055114
* Copied GO:0030071 to GO:0010564 with type OBO_REL:is_a
* Deleted definition dbxref GOC:dph from GO:0030534
* Deleted definition dbxref GOC:tb from GO:0030534
* Copied GO:0030743 to GO:0008171 with type OBO_REL:is_a
* Deleted GO:0032196 --OBO_REL:is_a--> GO:0009987
* Copied GO:0032196 to GO:0006310 with type OBO_REL:is_a
* Copied GO:0032430 to GO:0060193 with type OBO_REL:is_a
* Copied GO:0032884 to GO:0051128 with type OBO_REL:is_a
* Deleted synonym "1,5-anhydro-D-fructose reductase activity" from GO:0033712
* Deleted synonym "aldehyde oxidase activity" from GO:0033727
* Deleted synonym "glucoside 3-dehydrogenase" from GO:0033757
* Deleted synonym "6G-fructosyltransferase activity" from GO:0033841
* Deleted synonym "thiol sulfotransferase activity" from GO:0033870
* Deleted synonym "scymnol sulfotransferase activity" from GO:0033874
* Deleted synonym "ribonuclease T2 activity" from GO:0033897
* Deleted synonym "RNase U2 activity" from GO:0033899
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"
* Deleted GO:0033932 --OBO_REL:is_a--> GO:0004553
* Copied GO:0033932 to GO:0004560 with type OBO_REL:is_a
* Deleted synonym "alpha-L-fucosidase activity" from GO:0033938
* Deleted GO:0033938 --OBO_REL:is_a--> GO:0004553
* Copied GO:0033938 to GO:0004560 with type OBO_REL:is_a
* Deleted synonym "inulinase activity" from GO:0033948
* Deleted synonym "2-haloacid dehalogenase (configuration-inverting) activity" from GO:0033976
* Deleted synonym "2-haloacid dehalogenase (configuration-retaining) activity" from GO:0033977
* Deleted synonym "glucuronan lyase activity" from GO:0033994
* Deleted synonym "chondroitin B lyase activity" from GO:0033999
* Deleted synonym "chondroitin ABC lyase activity" from GO:0034000
* Deleted synonym "chondroitin-sulfate-ABC endolyase activity" from GO:0034000
* Deleted GO:0034000 --OBO_REL:is_a--> GO:0016837
* Copied GO:0034000 to GO:0047486 with type OBO_REL:is_a
* Deleted synonym "chondroitin ABC lyase activity" from GO:0034001
* Deleted synonym "chondroitin-sulfate-ABC exolyase activity" from GO:0034001
* Deleted GO:0034001 --OBO_REL:is_a--> GO:0016837
* Copied GO:0034001 to GO:0047486 with type OBO_REL:is_a
* Deleted synonym "L-ribulose-5-phosphate 3-epimerase activity" from GO:0034015
* Deleted synonym "DNA polymerase activity" from GO:0034061
* Copied GO:0034091 to GO:0010564 with type OBO_REL:is_a
* Deleted GO:0035187 --OBO_REL:is_a--> GO:0032501
* Deleted synonym "inositol-1,3,4-trisphosphate 5/6-kinase activity" from GO:0035300
* Deleted synonym "host cell nucleus" from GO:0042025
* Copied GO:0042443 to GO:0042133 with type OBO_REL:is_a
* Copied GO:0042444 to GO:0042136 with type OBO_REL:is_a
* Deleted synonym "vitamin B6 metabolic process" from GO:0042817
* Deleted synonym "vitamin B6 metabolism" from GO:0042817
* Copied GO:0043286 to GO:0009889 with type OBO_REL:is_a
* Deleted synonym "regulation of MAP kinase activity" from GO:0043405
* Deleted synonym "positive regulation of MAP kinase activity" from GO:0043406
* Deleted synonym "negative regulation of MAP kinase activity" from GO:0043407
* Deleted synonym "methylamine-specific methylcobalamin:coenzyme M methyltransferase activity" from GO:0043833
* Deleted synonym "protein stabilization" from GO:0045185
* Copied GO:0045212 to GO:0009059 with type OBO_REL:is_a
* Deleted synonym "9-cis-epoxycarotenoid dioxygenase activity" from GO:0045549
* Deleted synonym "positive regulation of translation" from GO:0045727
* Copied GO:0045798 to GO:0051053 with type OBO_REL:is_a
* Copied GO:0045799 to GO:0051054 with type OBO_REL:is_a
* Deleted synonym "negative regulation of mitotic cell cycle" from GO:0045930
* Deleted synonym "positive regulation of mitotic cell cycle" from GO:0045931
* Copied GO:0045936 to GO:0031324 with type OBO_REL:is_a
* Copied GO:0045937 to GO:0031325 with type OBO_REL:is_a
* Deleted synonym "positive regulation of mitotic cell cycle, embryonic" from GO:0045977
* Copied GO:0046017 to GO:0022402 with type OBO_REL:is_a
* Copied GO:0046020 to GO:0000122 with type OBO_REL:is_a
* Copied GO:0046021 to GO:0022402 with type OBO_REL:is_a
* Copied GO:0046023 to GO:0022402 with type OBO_REL:is_a
* Deleted synonym "ATP-dependent polynucleotide kinase activity" from GO:0046404
* Deleted synonym "violaxanthin de-epoxidase activity" from GO:0046422
* Copied GO:0046599 to GO:0010564 with type OBO_REL:is_a
* Deleted synonym "1-acylglycerophosphocholine O-acyltransferase activity" from GO:0047184
* Deleted synonym "galactinol-raffinose galactosyltransferase activity" from GO:0047268
* Deleted GO:0047513 --OBO_REL:is_a--> GO:0004553
* Copied GO:0047513 to GO:0004560 with type OBO_REL:is_a
* Deleted synonym "2,3-dihydroxyindole 2,3-dioxygenase activity" from GO:0047528
* Deleted synonym "CDP-abequose epimerase activity" from GO:0047732
* Deleted synonym "[citrate-(pro-3S)-lyase] thiolesterase activity" from GO:0047778
* Deleted synonym "cyclohexadienyl dehydrogenase activity" from GO:0047794
* Deleted synonym "erythrose-4-phosphate dehydrogenase activity" from GO:0048001
* Deleted GO:0048266 --OBO_REL:is_a--> GO:0032501
* Deleted synonym "L-galactonolactone oxidase activity" from GO:0050024
* Deleted synonym "lathosterol oxidase activity" from GO:0050046
* Deleted synonym "prostaglandin-E2 9-reductase activity" from GO:0050221
* Deleted synonym "rhodopsin kinase activity" from GO:0050254
* Deleted synonym "deoxyhypusine synthase activity" from GO:0050983
* Deleted synonym "positive regulation of NK T cell activation" from GO:0051135
* Deleted synonym "regulation of NK T cell proliferation" from GO:0051140
* Deleted synonym "regulation of ubiquitin-protein ligase activity" from GO:0051438
* Deleted synonym "regulation of meiotic cell cycle" from GO:0051445
* Deleted synonym "GTP-dependent polynucleotide kinase activity" from GO:0051735
* Deleted synonym "UTP-monosaccharide-1-phosphate uridylyltransferase activity" from GO:0051748
* Deleted synonym "phosphoglucan, water dikinase activity" from GO:0051752
* Deleted synonym "positive regulation by symbiont of host apoptosis" from GO:0052151
* Deleted GO:0055114 --OBO_REL:is_a--> GO:0008152
* Deleted GO:0022900 --OBO_REL:is_a--> GO:0055114
* Destroyed object GO:0055114