[Go-diff] GO update 04/17/2008

Thu Apr 17 21:30:45 PDT 2008

OBODIFF of gene_ontology_write.obo version 1.37 by 1.38

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0034406
* Created object of type obo:TERM with id GO:0034407
* Created object of type obo:TERM with id GO:0034408
* Created object of type obo:TERM with id GO:0034409
* Created object of type obo:TERM with id GO:0034410
* Created object of type obo:TERM with id GO:0034411
* Created object of type obo:TERM with id GO:0034412
* Created object of type obo:TERM with id GO:0034413
* Populated new object GO:0034406 (macro)
  * Changed name of GO:0034406 from "<new term>" to "cell wall beta-glucan metabolic process"
  * Set definition of GO:0034406 to "The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells."
  * Added definition dbxref GOC:mah to GO:0034406
  * Added GO:0034406 to category gosubset_prok
  * Added synonym "cell wall beta-glucan metabolism" to GO:0034406
  * Changed synonym scope of GO:0034406 from "Related" to "Exact"
  * Copied GO:0034406 to GO:0051273 with type OBO_REL:is_a
  * Copied GO:0034406 to GO:0010383 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034406
* Populated new object GO:0034407 (macro)
  * Changed name of GO:0034407 from "<new term>" to "cell wall 1,3-beta-glucan metabolic process"
  * Set definition of GO:0034407 to "The chemical reactions and pathways involving beta-1,3 glucans, compounds composed of glucose residues linked by 1,3-beta-D-glucosidic bonds, found in the walls of cells."
  * Added definition dbxref GOC:mah to GO:0034407
  * Added GO:0034407 to category gosubset_prok
  * Added synonym "cell wall 1,3-beta-glucan metabolism" to GO:0034407
  * Changed synonym scope of GO:0034407 from "Related" to "Exact"
  * Added synonym "cell wall beta-1,3 glucan metabolic process" to GO:0034407
  * Changed synonym scope of GO:0034407 from "Related" to "Exact"
  * Added synonym "cell wall beta-1,3 glucan metabolism" to GO:0034407
  * Changed synonym scope of GO:0034407 from "Related" to "Exact"
  * Copied GO:0034407 to GO:0006074 with type OBO_REL:is_a
  * Copied GO:0034407 to GO:0034406 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034407
* Populated new object GO:0034408 (macro)
  * Changed name of GO:0034408 from "<new term>" to "ascospore wall beta-glucan metabolic process"
  * Set definition of GO:0034408 to "The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores."
  * Added definition dbxref GOC:mah to GO:0034408
  * Added GO:0034408 to category gosubset_prok
  * Added synonym "ascospore wall beta-glucan metabolism" to GO:0034408
  * Changed synonym scope of GO:0034408 from "Related" to "Exact"
  * Copied GO:0034408 to GO:0006074 with type OBO_REL:is_a
  * Copied GO:0034408 to GO:0034406 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034408
* Populated new object GO:0034409 (macro)
  * Changed name of GO:0034409 from "<new term>" to "ascospore wall 1,3-beta-glucan metabolic process"
  * Set definition of GO:0034409 to "The chemical reactions and pathways involving beta-1,3 glucans, compounds composed of glucose residues linked by 1,3-beta-D-glucosidic bonds, found in the walls of ascospores."
  * Added definition dbxref GOC:mah to GO:0034409
  * Added GO:0034409 to category gosubset_prok
  * Added synonym "ascospore wall 1,3-beta-glucan metabolism" to GO:0034409
  * Changed synonym scope of GO:0034409 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-1,3 glucan metabolic process" to GO:0034409
  * Changed synonym scope of GO:0034409 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-1,3 glucan metabolism" to GO:0034409
  * Changed synonym scope of GO:0034409 from "Related" to "Exact"
  * Copied GO:0034409 to GO:0034407 with type OBO_REL:is_a
  * Copied GO:0034409 to GO:0034408 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034409
* Populated new object GO:0034410 (macro)
  * Changed name of GO:0034410 from "<new term>" to "cell wall beta-glucan biosynthetic process"
  * Set definition of GO:0034410 to "The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells."
  * Added definition dbxref GOC:mah to GO:0034410
  * Added GO:0034410 to category gosubset_prok
  * Added synonym "cell wall beta-glucan anabolism" to GO:0034410
  * Changed synonym scope of GO:0034410 from "Related" to "Exact"
  * Added synonym "cell wall beta-glucan biosynthesis" to GO:0034410
  * Changed synonym scope of GO:0034410 from "Related" to "Exact"
  * Added synonym "cell wall beta-glucan formation" to GO:0034410
  * Changed synonym scope of GO:0034410 from "Related" to "Exact"
  * Added synonym "cell wall beta-glucan synthesis" to GO:0034410
  * Changed synonym scope of GO:0034410 from "Related" to "Exact"
  * Copied GO:0034410 to GO:0051274 with type OBO_REL:is_a
  * Copied GO:0034410 to GO:0034406 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034410
* Populated new object GO:0034411 (macro)
  * Changed name of GO:0034411 from "<new term>" to "cell wall 1,3-beta-glucan biosynthetic process"
  * Set definition of GO:0034411 to "The chemical reactions and pathways resulting in the formation of 1,3-beta-glucans, compounds composed of glucose residues linked by 1,3-beta-D-glucosidic bonds, found in the walls of cells."
  * Added definition dbxref GOC:mah to GO:0034411
  * Added GO:0034411 to category gosubset_prok
  * Added synonym "cell wall 1,3-beta-glucan anabolism" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall 1,3-beta-glucan biosynthesis" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall 1,3-beta-glucan formation" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall 1,3-beta-glucan synthesis" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall beta-1,3-glucan anabolism" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall beta-1,3-glucan biosynthesis" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall beta-1,3-glucan biosynthetic process" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall beta-1,3-glucan formation" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Added synonym "cell wall beta-1,3-glucan synthesis" to GO:0034411
  * Changed synonym scope of GO:0034411 from "Related" to "Exact"
  * Copied GO:0034411 to GO:0034407 with type OBO_REL:is_a
  * Copied GO:0034411 to GO:0006075 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034411
* Populated new object GO:0034412 (macro)
  * Changed name of GO:0034412 from "<new term>" to "ascospore wall beta-glucan biosynthetic process"
  * Set definition of GO:0034412 to "The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores."
  * Added definition dbxref GOC:mah to GO:0034412
  * Added GO:0034412 to category gosubset_prok
  * Added synonym "ascospore wall beta-glucan anabolism" to GO:0034412
  * Changed synonym scope of GO:0034412 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-glucan biosynthesis" to GO:0034412
  * Changed synonym scope of GO:0034412 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-glucan formation" to GO:0034412
  * Changed synonym scope of GO:0034412 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-glucan synthesis" to GO:0034412
  * Changed synonym scope of GO:0034412 from "Related" to "Exact"
  * Copied GO:0034412 to GO:0034408 with type OBO_REL:is_a
  * Copied GO:0034412 to GO:0051274 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034412
* Populated new object GO:0034413 (macro)
  * Changed name of GO:0034413 from "<new term>" to "ascospore wall 1,3-beta-glucan biosynthetic process"
  * Set definition of GO:0034413 to "The chemical reactions and pathways resulting in the formation of 1,3-beta-glucans, compounds composed of glucose residues linked by 1,3-beta-D-glucosidic bonds, found in the walls of ascospores."
  * Added definition dbxref GOC:mah to GO:0034413
  * Added GO:0034413 to category gosubset_prok
  * Added synonym "ascospore wall 1,3-beta-glucan anabolism" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall 1,3-beta-glucan biosynthesis" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall 1,3-beta-glucan formation" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall 1,3-beta-glucan synthesis" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-1,3-glucan anabolism" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-1,3-glucan biosynthesis" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-1,3-glucan biosynthetic process" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-1,3-glucan formation" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Added synonym "ascospore wall beta-1,3-glucan synthesis" to GO:0034413
  * Changed synonym scope of GO:0034413 from "Related" to "Exact"
  * Copied GO:0034413 to GO:0034409 with type OBO_REL:is_a
  * Copied GO:0034413 to GO:0034411 with type OBO_REL:is_a
  * Copied GO:0034413 to GO:0034412 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034413
* Added synonym "adiposome" to GO:0005811
* Changed synonym scope of GO:0005811 from "Related" to "Exact"
* Added synonym "lipid body" to GO:0005811
* Changed synonym scope of GO:0005811 from "Related" to "Exact"
* Deleted GO:0009163 --OBO_REL:is_a--> GO:0044249
* Deleted GO:0009165 --OBO_REL:is_a--> GO:0044249
* Deleted GO:0034294 --part_of--> GO:0030436
* Copied GO:0034294 to GO:0034293 with type part_of
* Changed definition of GO:0034405 from "A change in state or activity of a cell or an organism
(in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface." to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface."
* Deleted GO:0046112 --OBO_REL:is_a--> GO:0044249