[Go-diff] GO update 12/09/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_write.obo version 1.345 by 1.347

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0070180
* Created object of type obo:TERM with id GO:0070181
* Created object of type obo:TERM with id GO:0070182
* Created object of type obo:TERM with id GO:0070183
* Created object of type obo:TERM with id GO:0070184
* Created object of type obo:TERM with id GO:0070185
* Populated new object GO:0070180 (macro)
  * Changed name of GO:0070180 from "<new term>" to "LSU rRNA binding"
  * Set definition of GO:0070180 to "Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA."
  * Added definition dbxref GOC:elh to GO:0070180
  * Added synonym "25S rRNA binding" to GO:0070180
  * Added general dbxref GOC:elh to synonym 25S rRNA binding of GO:0070180
  * Changed synonym scope of GO:0070180 from "Related" to "Exact"
  * Copied GO:0070180 to GO:0019843 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070180
* Populated new object GO:0070181 (macro)
  * Changed name of GO:0070181 from "<new term>" to "SSU rRNA binding"
  * Set definition of GO:0070181 to "Interacting selectively with the small ribosomal subunit RNA (SSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 18S rRNA."
  * Added definition dbxref GOC:elh to GO:0070181
  * Added synonym "18S rRNA binding" to GO:0070181
  * Added general dbxref GOC:elh to synonym 18S rRNA binding of GO:0070181
  * Changed synonym scope of GO:0070181 from "Related" to "Exact"
  * Copied GO:0070181 to GO:0019843 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070181
* Populated new object GO:0070182 (macro)
  * Changed name of GO:0070182 from "<new term>" to "DNA polymerase binding"
  * Set definition of GO:0070182 to "Interacting selectively with a DNA polymerase."
  * Added definition dbxref GOC:mah to GO:0070182
  * Added GO:0070182 to category gosubset_prok
  * Copied GO:0070182 to GO:0019899 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070182
* Populated new object GO:0070183 (macro)
  * Changed name of GO:0070183 from "<new term>" to "mitochondrial tryptophanyl-tRNA aminoacylation"
  * Set definition of GO:0070183 to "The process of coupling tryptophan to tryptophanyl-tRNA in a mitochondrion, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA."
  * Added definition dbxref GOC:mah to GO:0070183
  * Added definition dbxref GOC:mcc to GO:0070183
  * Copied GO:0070183 to GO:0006436 with type OBO_REL:is_a
  * Copied GO:0070183 to GO:0070127 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070183
* Populated new object GO:0070184 (macro)
  * Changed name of GO:0070184 from "<new term>" to "mitochondrial tyrosyl-tRNA aminoacylation"
  * Set definition of GO:0070184 to "The process of coupling threonine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA."
  * Added definition dbxref GOC:mah to GO:0070184
  * Added definition dbxref GOC:mcc to GO:0070184
  * Copied GO:0070184 to GO:0070127 with type OBO_REL:is_a
  * Copied GO:0070184 to GO:0006437 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070184
* Populated new object GO:0070185 (macro)
  * Changed name of GO:0070185 from "<new term>" to "mitochondrial valyl-tRNA aminoacylation"
  * Set definition of GO:0070185 to "The process of coupling valine to valyl-tRNA in a mitochondrion, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA."
  * Added definition dbxref GOC:mah to GO:0070185
  * Added definition dbxref GOC:mcc to GO:0070185
  * Copied GO:0070185 to GO:0006438 with type OBO_REL:is_a
  * Copied GO:0070185 to GO:0070127 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070185
* Changed definition of GO:0006558 from "The chemical reactions and pathways involving L-phenylalanine, the levorotatory isomer of 2-amino-3-phenylpropanoic acid." to "The chemical reactions and pathways involving L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid."
* Added definition dbxref ChEBI:17295 to GO:0006558
* Added definition dbxref GOC:jsg to GO:0006558
* Added definition dbxref GOC:mah to GO:0006558
* Changed definition of GO:0006563 from "The chemical reactions and pathways involving L-serine, the L-configuration stereoisomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid." to "The chemical reactions and pathways involving L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid."
* Changed definition of GO:0006564 from "The chemical reactions and pathways resulting in the formation of L-serine, the L-configuration stereoisomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid." to "The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid."
* Changed definition of GO:0006565 from "The chemical reactions and pathways resulting in the breakdown of L-serine, the L-configuration stereoisomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid." to "The chemical reactions and pathways resulting in the breakdown of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid."
* Changed definition of GO:0009094 from "The chemical reactions and pathways resulting in the formation of L-phenylalanine, the levorotatory isomer of 2-amino-3-phenylpropanoic acid." to "The chemical reactions and pathways resulting in the formation of L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid."
* Added definition dbxref ChEBI:17295 to GO:0009094
* Added definition dbxref GOC:jsg to GO:0009094
* Added definition dbxref GOC:mah to GO:0009094
* Set definition of GO:0009979 to "Catalysis of the introduction of an omega-3 double bond into an unsaturated 16-carbon fatty acid in a monogalactosyldiacylglycerol molecule."
* Added definition dbxref GOC:mah to GO:0009979
* Added definition dbxref MetaCyc:RXN-1728 to GO:0009979
* Added definition dbxref MetaCyc:RXN-8304 to GO:0009979
* Added definition dbxref MetaCyc:RXN-8307 to GO:0009979
* Changed definition of GO:0015179 from "Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids." to "Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the L-enantiomers of amino acids."
* Added definition dbxref GOC:jsg to GO:0015179
* Added definition dbxref GOC:mah to GO:0015179
* Changed definition of GO:0015180 from "Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine, the levorotatory isomer of 2-aminopropanoic acid." to "Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine is the L-enantiomer of 2-aminopropanoic acid."
* Added definition dbxref GOC:jsg to GO:0015180
* Added definition dbxref GOC:mah to GO:0015180
* Changed definition of GO:0015182 from "Catalysis of the transfer of L-asparagine from one side of a membrane to the other. L-asparagine is the levorotatory isomer of alpha-aminosuccinamic acid." to "Catalysis of the transfer of L-asparagine from one side of a membrane to the other. L-asparagine is the L-enantiomer of alpha-aminosuccinamic acid."
* Added definition dbxref GOC:jsg to GO:0015182
* Added definition dbxref GOC:mah to GO:0015182
* Changed definition of GO:0015194 from "Catalysis of the transfer of L-serine from one side of a membrane to the other. L-serine is the levorotatory isomer of 2-amino-3-hydroxypropanoic acid." to "Catalysis of the transfer of L-serine from one side of a membrane to the other. L-serine is the L-enantiomer of 2-amino-3-hydroxypropanoic acid."
* Added definition dbxref GOC:jsg to GO:0015194
* Added definition dbxref GOC:mah to GO:0015194
* Changed definition of GO:0015626 from "Catalysis of the transfer of L-diaminopimelate from one side of a membrane to the other. L-diaminopimelate is the levorotatory isomer anion of 2,6-diaminoheptanedioic acid." to "Catalysis of the transfer of L-diaminopimelate from one side of a membrane to the other. L-diaminopimelate is the L-enantiomer anion of 2,6-diaminoheptanedioic acid."
* Added definition dbxref GOC:jsg to GO:0015626
* Added definition dbxref GOC:mah to GO:0015626
* Changed definition of GO:0015807 from "The directed movement of levorotatory isomer amino acids into, out of, within or between cells." to "The directed movement of L-enantiomer amino acids into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0015807
* Added definition dbxref GOC:mah to GO:0015807
* Changed definition of GO:0015808 from "The directed movement of L-alanine, the levorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells." to "The directed movement of L-alanine, the L-enantiomer of 2-aminopropanoic acid, into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0015808
* Added definition dbxref GOC:mah to GO:0015808
* Changed definition of GO:0015825 from "The directed movement of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells." to "The directed movement of L-serine, the L-enantiomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0015825
* Added definition dbxref GOC:mah to GO:0015825
* Changed definition of GO:0019312 from "The chemical reactions and pathways involving sorbose, the levorotatory isomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol." to "The chemical reactions and pathways involving sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol."
* Added definition dbxref ChEBI:17266 to GO:0019312
* Added definition dbxref GOC:jsg to GO:0019312
* Added definition dbxref GOC:mah to GO:0019312
* Changed definition of GO:0019314 from "The chemical reactions and pathways involving D-allose, the dextrorotatory isomer of D-allo-hexose, an aldohexose similar to glucose." to "The chemical reactions and pathways involving D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose."
* Added definition dbxref ChEBI:17393 to GO:0019314
* Added definition dbxref GOC:jsg to GO:0019314
* Added definition dbxref GOC:mah to GO:0019314
* Changed definition of GO:0019315 from "The chemical reactions and pathways resulting in the formation of D-allose, the dextrorotatory isomer of D-allo-hexose, an aldohexose similar to glucose." to "The chemical reactions and pathways resulting in the formation of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose."
* Added definition dbxref ChEBI:17393 to GO:0019315
* Added definition dbxref GOC:jsg to GO:0019315
* Added definition dbxref GOC:mah to GO:0019315
* Changed definition of GO:0019316 from "The chemical reactions and pathways resulting in the breakdown of D-allose, the dextrorotatory isomer of D-allo-hexose, an aldohexose similar to glucose." to "The chemical reactions and pathways resulting in the breakdown of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose."
* Added definition dbxref ChEBI:17393 to GO:0019316
* Added definition dbxref GOC:jsg to GO:0019316
* Added definition dbxref GOC:mah to GO:0019316
* Changed definition of GO:0019324 from "The chemical reactions and pathways involving L-lyxose, the levorotatory isomer of aldopentose lyxo-pentose, the C-2 epimer of xylose." to "The chemical reactions and pathways involving L-lyxose, the L-enantiomer of aldopentose lyxo-pentose, the C-2 epimer of xylose."
* Deleted definition dbxref Oxford Dictionary of Biochemistry and Molecular Biology (ISBN:0198506732) from GO:0019324
* Added definition dbxref Oxford Dictionary of Biochemistry and Molecular Biology, GOC:jsg, GOC:mah (ISBN:0198506732) to GO:0019324
* Changed definition of GO:0019448 from "The chemical reactions and pathways resulting in the breakdown of L-cysteine, the levorotatory isomer of 2-amino-3-mercaptopropanoic acid." to "The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid."
* Added definition dbxref ChEBI:17561 to GO:0019448
* Added definition dbxref GOC:jsg to GO:0019448
* Added definition dbxref GOC:mah to GO:0019448
* Changed definition of GO:0019476 from "The chemical reactions and pathways resulting in the breakdown of D-lysine, the D-configuration stereoisomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid." to "The chemical reactions and pathways resulting in the breakdown of D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid."
* Changed definition of GO:0019477 from "The chemical reactions and pathways resulting in the breakdown of L-lysine, the levorotatory isomer of (S)-2,6-diaminohexanoic acid." to "The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid."
* Added definition dbxref GOC:jsg to GO:0019477
* Added definition dbxref GOC:mah to GO:0019477
* Changed definition of GO:0019478 from "The chemical reactions and pathways resulting in the breakdown of D-amino acids, the D-configuration stereoisomers of amino acids." to "The chemical reactions and pathways resulting in the breakdown of D-amino acids, the D-enantiomers of amino acids."
* Changed definition of GO:0019571 from "The chemical reactions and pathways resulting in the breakdown of D-arabinose, the dextrorotatory isomer of arabino-pentose." to "The chemical reactions and pathways resulting in the breakdown of D-arabinose, the D-enantiomer of arabino-pentose."
* Added definition dbxref ChEBI:17108 to GO:0019571
* Added definition dbxref GOC:jsg to GO:0019571
* Added definition dbxref GOC:mah to GO:0019571
* Changed definition of GO:0019572 from "The chemical reactions and pathways resulting in the breakdown of L-arabinose, the levorotatory isomer of arabino-pentose." to "The chemical reactions and pathways resulting in the breakdown of L-arabinose, the L-enantiomer of arabino-pentose."
* Added definition dbxref ChEBI:30849 to GO:0019572
* Added definition dbxref GOC:jsg to GO:0019572
* Added definition dbxref GOC:mah to GO:0019572
* Changed definition of GO:0019582 from "The chemical reactions and pathways resulting in the breakdown of D-galactarate, the dextrorotatory isomer of the anion of galactaric acid." to "The chemical reactions and pathways resulting in the breakdown of D-galactarate, the D-enantiomer of the anion of galactaric acid."
* Added definition dbxref GOC:jsg to GO:0019582
* Added definition dbxref GOC:mah to GO:0019582
* Changed definition of GO:0019680 from "The chemical reactions and pathways resulting in the formation of L-methylmalonyl-CoA, the levorotatory isomer of 2-carboxypropanoyl-CoA." to "The chemical reactions and pathways resulting in the formation of L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA."
* Added definition dbxref GOC:jsg to GO:0019680
* Added definition dbxref GOC:mah to GO:0019680
* Changed definition of GO:0019698 from "The chemical reactions and pathways resulting in the breakdown of D-galacturonate, the dextrorotatory isomer of galacturonate, the anion of galacturonic acid." to "The chemical reactions and pathways resulting in the breakdown of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid."
* Added definition dbxref GOC:jsg to GO:0019698
* Added definition dbxref GOC:mah to GO:0019698
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Deleted synonym "small nucleolar RNA" from GO:0030555
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Changed comment from "Note that this term may be useful for annotating snoRNAs." to "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins. Note that this term may be useful for annotating snoRNAs."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Changed comment from "Note that this term may be useful for annotating snoRNAs." to "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins. Note that this term may be useful for annotating snoRNAs."
* Added comment "Note that this term describes the activity of a nucleic acid, usually RNA, gene product that interacts with other RNA molecules via base pairing; it should not be used to annotate proteins."
* Changed definition of GO:0030632 from "The chemical reactions and pathways resulting in the formation of D-alanine, the D-configuration stereoisomer of the amino acid alanine, i.e (2R)-2-aminopropanoic acid." to "The chemical reactions and pathways resulting in the formation of D-alanine, the D-enantiomer of the amino acid alanine, i.e (2R)-2-aminopropanoic acid."
* Added definition dbxref ChEBI:15570 to GO:0030632
* Changed definition of GO:0033053 from "The chemical reactions and pathways involving D-glutamine, the D-configuration stereoisomer of the amino acid glutamine, i.e. (2R)-2,5-diamino-5-oxopentanoic acid." to "The chemical reactions and pathways involving D-glutamine, the D-enantiomer of the amino acid glutamine, i.e. (2R)-2,5-diamino-5-oxopentanoic acid."
* Changed definition of GO:0033054 from "The chemical reactions and pathways involving D-glutamate, the D-configuration stereoisomer of the amino acid glutamate, i.e. (2R)-2-aminopentanedioic acid." to "The chemical reactions and pathways involving D-glutamate, the D-enantiomer of the amino acid glutamate, i.e. (2R)-2-aminopentanedioic acid."
* Changed definition of GO:0033055 from "The chemical reactions and pathways involving D-arginine, the D-configuration stereoisomer of the amino acid arginine, i.e. (2R)-2-amino-5-(carbamimidamido)pentanoic acid." to "The chemical reactions and pathways involving D-arginine, the D-enantiomer of the amino acid arginine, i.e. (2R)-2-amino-5-(carbamimidamido)pentanoic acid."
* Changed definition of GO:0033056 from "The chemical reactions and pathways involving D-ornithine, the D-configuration stereoisomer of the amino acid ornithine, i.e. 
(2R)-2,5-diaminopentanoic acid." to "The chemical reactions and pathways involving D-ornithine, the D-enantiomer of the amino acid ornithine, i.e. (2R)-2,5-diaminopentanoic acid."
* Changed definition of GO:0033482 from "The chemical reactions and pathways resulting in the formation of D-galacturonate, the dextrorotatory isomer of galacturonate, the anion of galacturonic acid." to "The chemical reactions and pathways resulting in the formation of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid."
* Added definition dbxref GOC:jsg to GO:0033482
* Changed definition of GO:0042836 from "The chemical reactions and pathways involving D-glucarate, the dextrorotatory isomer of glucarate. D-glucarate is derived from either D-glucose or L-gulose." to "The chemical reactions and pathways involving D-glucarate, the D-enantiomer of glucarate. D-glucarate is derived from either D-glucose or L-gulose."
* Added definition dbxref GOC:jsg to GO:0042836
* Added definition dbxref GOC:mah to GO:0042836
* Changed definition of GO:0042837 from "The chemical reactions and pathways resulting in the formation of D-glucarate, the dextrorotatory isomer of glucarate." to "The chemical reactions and pathways resulting in the formation of D-glucarate, the D-enantiomer of glucarate."
* Added definition dbxref GOC:jsg to GO:0042837
* Added definition dbxref GOC:mah to GO:0042837
* Changed definition of GO:0042838 from "The chemical reactions and pathways resulting in the breakdown of D-glucarate, the dextrorotatory isomer of glucarate." to "The chemical reactions and pathways resulting in the breakdown of D-glucarate, the D-enantiomer of glucarate."
* Added definition dbxref GOC:jsg to GO:0042838
* Added definition dbxref GOC:mah to GO:0042838
* Changed definition of GO:0042839 from "The chemical reactions and pathways involving D-glucuronate, the dextrorotatory isomer of glucuronate." to "The chemical reactions and pathways involving D-glucuronate, the D-enantiomer of glucuronate."
* Added definition dbxref GOC:jsg to GO:0042839
* Added definition dbxref GOC:mah to GO:0042839
* Changed definition of GO:0042840 from "The chemical reactions and pathways resulting in the breakdown of D-glucuronate, the dextrorotatory isomer of glucuronate." to "The chemical reactions and pathways resulting in the breakdown of D-glucuronate, the D-enantiomer of glucuronate."
* Added definition dbxref GOC:jsg to GO:0042840
* Added definition dbxref GOC:mah to GO:0042840
* Changed definition of GO:0042841 from "The chemical reactions and pathways resulting in the formation of D-glucuronate, the dextrorotatory isomer of glucuronate." to "The chemical reactions and pathways resulting in the formation of D-glucuronate, the D-enantiomer of glucuronate."
* Added definition dbxref GOC:jsg to GO:0042841
* Added definition dbxref GOC:mah to GO:0042841
* Changed definition of GO:0042849 from "The chemical reactions and pathways resulting in the formation of L-sorbose, the levorotatory isomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol." to "The chemical reactions and pathways resulting in the formation of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol."
* Added definition dbxref ChEBI:17266 to GO:0042849
* Added definition dbxref GOC:jsg to GO:0042849
* Added definition dbxref GOC:mah to GO:0042849
* Changed definition of GO:0042850 from "The chemical reactions and pathways resulting in the breakdown of L-sorbose, the levorotatory isomer of the ketohexose xylo-2-hexulose." to "The chemical reactions and pathways resulting in the breakdown of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose."
* Added definition dbxref ChEBI:17266 to GO:0042850
* Added definition dbxref GOC:jsg to GO:0042850
* Added definition dbxref GOC:mah to GO:0042850
* Changed definition of GO:0042851 from "The chemical reactions and pathways involving L-alanine, the levorotatory isomer of 2-aminopropanoic acid." to "The chemical reactions and pathways involving L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid."
* Added definition dbxref ChEBI:16977 to GO:0042851
* Added definition dbxref GOC:jsg to GO:0042851
* Added definition dbxref GOC:mah to GO:0042851
* Changed definition of GO:0042852 from "The chemical reactions and pathways resulting in the formation of L-alanine, the levorotatory isomer of 2-aminopropanoic acid." to "The chemical reactions and pathways resulting in the formation of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid."
* Added definition dbxref ChEBI:16977 to GO:0042852
* Added definition dbxref GOC:jsg to GO:0042852
* Added definition dbxref GOC:mah to GO:0042852
* Changed definition of GO:0042853 from "The chemical reactions and pathways resulting in the breakdown of L-alanine, the levorotatory isomer of 2-aminopropanoic acid." to "The chemical reactions and pathways resulting in the breakdown of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid."
* Added definition dbxref ChEBI:16977 to GO:0042853
* Added definition dbxref GOC:jsg to GO:0042853
* Added definition dbxref GOC:mah to GO:0042853
* Changed definition of GO:0042870 from "The directed movement of D-glucarate, the dextrorotatory isomer of glucarate, into, out of, within or between cells." to "The directed movement of D-glucarate, the D-enantiomer of glucarate, into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0042870
* Added definition dbxref GOC:mah to GO:0042870
* Changed definition of GO:0042871 from "The directed movement of D-galactarate into, out of, within or between cells. D-galactarate is the dextrorotatory isomer of galactarate, the anion of galactaric acid." to "The directed movement of D-galactarate into, out of, within or between cells. D-galactarate is the D-enantiomer of galactarate, the anion of galactaric acid."
* Added definition dbxref GOC:jsg to GO:0042871
* Added definition dbxref GOC:mah to GO:0042871
* Changed definition of GO:0042872 from "The chemical reactions and pathways resulting in the formation of D-galactarate, the dextrorotatory isomer of the anion of galactaric acid." to "The chemical reactions and pathways resulting in the formation of D-galactarate, the D-enantiomer of the anion of galactaric acid."
* Added definition dbxref GOC:jsg to GO:0042872
* Added definition dbxref GOC:mah to GO:0042872
* Changed definition of GO:0042874 from "The directed movement of D-glucuronate, the dextrorotatory isomer of glucuronate into, out of, within or between cells." to "The directed movement of D-glucuronate, the D-enantiomer of glucuronate into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0042874
* Added definition dbxref GOC:mah to GO:0042874
* Changed definition of GO:0042875 from "The directed movement of D-galactonate, the dextrorotatory isomer of galactonate, into, out of, within or between cells." to "The directed movement of D-galactonate, the D-enantiomer of galactonate, into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0042875
* Added definition dbxref GOC:mah to GO:0042875
* Changed definition of GO:0042877 from "Catalysis of the transfer of D-galactarate, the dextrorotatory isomer of the anion of galactaric acid, from one side of the membrane to the other." to "Catalysis of the transfer of D-galactarate, the D-enantiomer of the anion of galactaric acid, from one side of the membrane to the other."
* Added definition dbxref GOC:jsg to GO:0042877
* Added definition dbxref GOC:mah to GO:0042877
* Changed definition of GO:0042878 from "Catalysis of the transfer of D-glucarate, the dextrorotatory isomer of glucarate, from one side of the membrane to the other." to "Catalysis of the transfer of D-glucarate, the D-enantiomer of glucarate, from one side of the membrane to the other."
* Added definition dbxref GOC:jsg to GO:0042878
* Added definition dbxref GOC:mah to GO:0042878
* Changed definition of GO:0042880 from "Catalysis of the transfer of D-glucuronate, the dextrorotatory isomer of glucuronate, from one side of the membrane to the other." to "Catalysis of the transfer of D-glucuronate, the D-enantiomer of glucuronate, from one side of the membrane to the other."
* Added definition dbxref GOC:jsg to GO:0042880
* Added definition dbxref GOC:mah to GO:0042880
* Changed definition of GO:0042881 from "Catalysis of the transfer of D-galactonate, the dextrorotatory isomer of galactonate, from one side of the membrane to the other." to "Catalysis of the transfer of D-galactonate, the D-enantiomer of galactonate, from one side of the membrane to the other."
* Added definition dbxref GOC:jsg to GO:0042881
* Added definition dbxref GOC:mah to GO:0042881
* Changed definition of GO:0042882 from "The directed movement of L-arabinose, the levorotatory isomer of arabinose, into, out of, within or between cells." to "The directed movement of L-arabinose, the L-enantiomer of arabinose, into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0042882
* Added definition dbxref GOC:mah to GO:0042882
* Changed definition of GO:0042940 from "The directed movement of the dextrorotatory isomer of an amino acid into, out of, within or between cells." to "The directed movement of the D-enantiomer of an amino acid into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0042940
* Added definition dbxref GOC:mah to GO:0042940
* Changed definition of GO:0042941 from "The directed movement of D-alanine, the dextrorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells." to "The directed movement of D-alanine, the D-enantiomer of 2-aminopropanoic acid, into, out of, within or between cells."
* Added definition dbxref ChEBI:15570 to GO:0042941
* Added definition dbxref GOC:jsg to GO:0042941
* Added definition dbxref GOC:mah to GO:0042941
* Changed definition of GO:0042942 from "The directed movement of D-serine, the dextrorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells." to "The directed movement of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells."
* Added definition dbxref GOC:jsg to GO:0042942
* Added definition dbxref GOC:mah to GO:0042942
* Changed definition of GO:0042943 from "Catalysis of the transfer of D-amino acids from one side of a membrane to the other. D-amino acids are the dextrorotatory isomer of amino acids." to "Catalysis of the transfer of D-amino acids from one side of a membrane to the other. D-amino acids are the D-enantiomers of amino acids."
* Added definition dbxref GOC:jsg to GO:0042943
* Added definition dbxref GOC:mah to GO:0042943
* Changed definition of GO:0042944 from "Catalysis of the transfer of D-alanine from one side of a membrane to the other. D-alanine is the dextrorotatory isomer of 2-aminopropanoic acid." to "Catalysis of the transfer of D-alanine from one side of a membrane to the other. D-alanine is the D-enantiomer of 2-aminopropanoic acid."
* Added definition dbxref ChEBI:15570 to GO:0042944
* Changed definition of GO:0042945 from "Catalysis of the transfer of D-serine from one side of a membrane to the other. D-serine is the dextrorotatory isomer of 2-amino-3-hydroxypropanoic acid." to "Catalysis of the transfer of D-serine from one side of a membrane to the other. D-serine is the D-enantiomer of 2-amino-3-hydroxypropanoic acid."
* Added definition dbxref GOC:jsg to GO:0042945
* Added definition dbxref GOC:mah to GO:0042945
* Changed definition of GO:0043091 from "The directed movement of L-arginine, the levorotatory isomer of 2-amino-5-guanidinopentanoic acid, into a cell or organelle." to "The directed movement of L-arginine, the L-enantiomec of 2-amino-5-guanidinopentanoic acid, into a cell or organelle."
* Added definition dbxref GOC:jsg to GO:0043091
* Added definition dbxref GOC:mah to GO:0043091
* Changed definition of GO:0043092 from "The directed movement of levorotatory isomer amino acids into a cell or organelle." to "The directed movement of L-enantiomer amino acids into a cell or organelle."
* Added definition dbxref GOC:jsg to GO:0043092
* Added definition dbxref GOC:mah to GO:0043092
* Changed definition of GO:0046372 from "The chemical reactions and pathways involving D-arabinose, the dextrorotatory isomer of arabino-pentose. D-arabinose occurs in plant glycosides and is a constituent of arabinonucleosides." to "The chemical reactions and pathways involving D-arabinose, the D-enantiomer of arabino-pentose. D-arabinose occurs in plant glycosides and is a constituent of arabinonucleosides."
* Added definition dbxref ChEBI:17108 to GO:0046372
* Added definition dbxref GOC:jsg to GO:0046372
* Added definition dbxref GOC:mah to GO:0046372
* Changed definition of GO:0046373 from "The chemical reactions and pathways involving L-arabinose, the levorotatory isomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc." to "The chemical reactions and pathways involving L-arabinose, the D-enantiomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc."
* Added definition dbxref ChEBI:30849 to GO:0046373
* Added definition dbxref GOC:jsg to GO:0046373
* Added definition dbxref GOC:mah to GO:0046373
* Changed definition of GO:0046393 from "The chemical reactions and pathways involving D-galactarate, the dextrorotatory isomer of galactarate, the anion of galactaric acid." to "The chemical reactions and pathways involving D-galactarate, the D-enantiomer of galactarate, the anion of galactaric acid."
* Added definition dbxref GOC:jsg to GO:0046393
* Added definition dbxref GOC:mah to GO:0046393
* Changed definition of GO:0046396 from "The chemical reactions and pathways involving D-galacturonate, the dextrorotatory isomer of galacturonate, the anion of galacturonic acid. D-galacturonic acid is a component of plant gums and bacterial cell walls." to "The chemical reactions and pathways involving D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid. D-galacturonic acid is a component of plant gums and bacterial cell walls."
* Added definition dbxref GOC:jsg to GO:0046396
* Added definition dbxref GOC:mah to GO:0046396
* Changed definition of GO:0046416 from "The chemical reactions and pathways involving D-amino acids, the D-configuration stereoisomers of amino acids." to "The chemical reactions and pathways involving D-amino acids, the D-enantiomers of amino acids."
* Changed definition of GO:0046436 from "The chemical reactions and pathways involving D-alanine, the D-configuration stereoisomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid." to "The chemical reactions and pathways involving D-alanine, the D-enantiomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid."
* Changed definition of GO:0046437 from "The chemical reactions and pathways resulting in the formation of D-amino acids, the D-configuration stereoisomers of amino acids." to "The chemical reactions and pathways resulting in the formation of D-amino acids, the D-enantiomers of amino acids."
* Changed definition of GO:0046439 from "The chemical reactions and pathways involving L-cysteine, the levorotatory isomer of 2-amino-3-mercaptopropanoic acid." to "The chemical reactions and pathways involving L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid."
* Added definition dbxref ChEBI:17561 to GO:0046439
* Added definition dbxref GOC:jsg to GO:0046439
* Added definition dbxref GOC:mah to GO:0046439
* Changed definition of GO:0046440 from "The chemical reactions and pathways involving L-lysine, the levorotatory isomer of (S)-2,6-diaminohexanoic acid." to "The chemical reactions and pathways involving L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid, i.e. (2S)-2,6-diaminohexanoic acid."
* Added definition dbxref ChEBI:18019 to GO:0046440
* Added definition dbxref GOC:jsg to GO:0046440
* Added definition dbxref GOC:mah to GO:0046440
* Changed definition of GO:0046441 from "The chemical reactions and pathways involving D-lysine,  the D-configuration stereoisomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid." to "The chemical reactions and pathways involving D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid."
* Changed definition of GO:0046491 from "The chemical reactions and pathways involving L-methylmalonyl-CoA, the levorotatory isomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals." to "The chemical reactions and pathways involving L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals."
* Added definition dbxref GOC:jsg to GO:0046491
* Added definition dbxref GOC:mah to GO:0046491
* Deleted general dbxref GOC:tb from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Deleted general dbxref GOC:dph from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Changed synonym scope of GO:0051663 from "Related" to "Exact"
* Changed definition of GO:0051938 from "The directed movement of L-glutamate, the levorotatory isomer of the anion of 2-aminopentanedioic acid, into a cell or organelle." to "The directed movement of L-glutamate, the L-enantiomer of the anion of 2-aminopentanedioic acid, into a cell or organelle."
* Added definition dbxref GOC:jsg to GO:0051938
* Added definition dbxref GOC:mah to GO:0051938
* Changed definition of GO:0055055 from "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. D-glucose is the dextrorotatory isomer of glucose." to "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. D-glucose is the dextrorotatory D-enantiomer of glucose."
* Changed definition of GO:0055056 from "Catalysis of the transfer of the dextrorotatory isomer of the hexose monosaccharide glucose from one side of the membrane to the other." to "Catalysis of the transfer of the D-enantiomer of the hexose monosaccharide glucose from one side of the membrane to the other."
* Added definition dbxref GOC:jsg to GO:0055056
* Added definition dbxref GOC:mah to GO:0055056
* Changed definition of GO:0070176 from "A transcriptional repressor complex that contains the  lin-9, lin-35, lin-37, lin-52, lin-53, lin-5is involved in 4-, dpl-1 and efl-1 proteins, and is involveed in cell fate specification." to "A transcriptional repressor complex that contains the lin-9, lin-35, lin-37, lin-52, lin-53, lin-5is involved in 4-, dpl-1 and efl-1 proteins, and is involveed in cell fate specification."
* Changed definition of GO:0070178 from "The chemical reactions and pathways involving D-serine, the D-configuration stereoisomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid." to "The chemical reactions and pathways involving D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid."
* Changed definition of GO:0070179 from "The chemical reactions and pathways resulting in the formation of D-serine, the D-configuration stereoisomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid. D-serine is often formed by racemization of L-serine." to "The chemical reactions and pathways resulting in the formation of D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid. D-serine is often formed by racemization of L-serine."