[go-diff] GO update 02/05/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.679 by 5.680

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0000835
* Created object of type obo:TERM with id GO:0000836
* Created object of type obo:TERM with id GO:0000837
* Created object of type obo:TERM with id GO:0000838
* Created object of type obo:TERM with id GO:0000839
* Populated new object GO:0000835 (macro)
  * Changed name of GO:0000835 from "<new term>" to "ER ubiquitin ligase complex"
  * Set definition of GO:0000835 to "A ubiquitin ligase complex found in the ER."
  * Added definition dbxref GOC:elh to GO:0000835
  * Copied GO:0000835 to GO:0000151 with type OBO_REL:is_a
  * Copied GO:0000835 to GO:0005789 with type part_of
  * Assigned namespace "cellular_component" to GO:0000835
* Populated new object GO:0000836 (macro)
  * Changed name of GO:0000836 from "<new term>" to "Hrd1p ubiquitin ligase complex"
  * Set definition of GO:0000836 to "A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal and membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p."
  * Added definition dbxref GOC:elh to GO:0000836
  * Added definition dbxref PMID:16873066 to GO:0000836
  * Copied GO:0000836 to GO:0000835 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0000836
* Populated new object GO:0000837 (macro)
  * Changed name of GO:0000837 from "<new term>" to "Doa10p ubiquitin ligase complex"
  * Set definition of GO:0000837 to "A multiprotein complex that recognizes and ubiquitinates membranes proteins with misfolded cytosolic domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Ssm4p/Doa10p."
  * Added definition dbxref GOC:elh to GO:0000837
  * Added definition dbxref PMID:16873066 to GO:0000837
  * Added synonym "Ssm4p ubiquitin ligase complex" to GO:0000837
  * Changed synonym scope of GO:0000837 from "Related" to "Exact"
  * Copied GO:0000837 to GO:0000835 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0000837
* Populated new object GO:0000838 (macro)
  * Changed name of GO:0000838 from "<new term>" to "Hrd1p ubiquitin ligase ERAD-M complex"
  * Set definition of GO:0000838 to "A multiprotein complex that recognizes and ubiquitinates proteins with misfolded membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p."
  * Added definition dbxref GOC:elh to GO:0000838
  * Added definition dbxref PMID:16873066 to GO:0000838
  * Copied GO:0000838 to GO:0000836 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0000838
* Populated new object GO:0000839 (macro)
  * Changed name of GO:0000839 from "<new term>" to "Hrd1p ubiquitin ligase ERAD-L complex"
  * Set definition of GO:0000839 to "A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p."
  * Added definition dbxref GOC:elh to GO:0000839
  * Added definition dbxref PMID:16873065 to GO:0000839
  * Added definition dbxref PMID:16873066 to GO:0000839
  * Copied GO:0000839 to GO:0000836 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0000839
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"