[go-diff] GO update 02/14/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.692 by 5.694

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0060219
* Created object of type obo:TERM with id GO:0060220
* Created object of type obo:TERM with id GO:0060221
* Created object of type obo:TERM with id GO:0060222
* Created object of type obo:TERM with id GO:0060223
* Created object of type obo:TERM with id GO:0060224
* Created object of type obo:TERM with id GO:0060225
* Created object of type obo:TERM with id GO:0060226
* Created object of type obo:TERM with id GO:0060227
* Populated new object GO:0060219 (macro)
  * Changed name of GO:0060219 from "<new term>" to "camera-type eye photoreceptor cell differentiation"
  * Set definition of GO:0060219 to "The process whereby a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye."
  * Added definition dbxref GOC:dph to GO:0060219
  * Copied GO:0060219 to GO:0001754 with type OBO_REL:is_a
  * Copied GO:0060219 to GO:0060042 with type part_of
  * Assigned namespace "biological_process" to GO:0060219
* Populated new object GO:0060220 (macro)
  * Changed name of GO:0060220 from "<new term>" to "camera-type eye photoreceptor cell fate commitment"
  * Set definition of GO:0060220 to "The process whereby the developmental fate of a cell becomes
restricted such that it will develop into a photoreceptor cell in a camera-type eye."
  * Added definition dbxref GOC:dph to GO:0060220
  * Copied GO:0060220 to GO:0042706 with type OBO_REL:is_a
  * Copied GO:0060220 to GO:0060219 with type part_of
  * Assigned namespace "biological_process" to GO:0060220
* Populated new object GO:0060221 (macro)
  * Changed name of GO:0060221 from "<new term>" to "retinal rod cell differentiation"
  * Set definition of GO:0060221 to "The process whereby a relatively unspecialized cell acquires the specialized features of a retinal rod cell."
  * Added definition dbxref GOC:dph to GO:0060221
  * Copied GO:0060221 to GO:0060219 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060221
* Populated new object GO:0060222 (macro)
  * Changed name of GO:0060222 from "<new term>" to "regulation of retinal cone cell fate commitment"
  * Set definition of GO:0060222 to "Any process that modulates the process whereby a cell becomes commited to a retinal cone cell fate. Retinal cone cell fate commitment is the process whereby the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell."
  * Added definition dbxref GOC:dph to GO:0060222
  * Copied GO:0060222 to GO:0010453 with type OBO_REL:is_a
  * Copied GO:0060222 to GO:0046551 with type part_of
  * Assigned namespace "biological_process" to GO:0060222
* Populated new object GO:0060223 (macro)
  * Changed name of GO:0060223 from "<new term>" to "retinal rod cell fate commitment"
  * Set definition of GO:0060223 to "The process whereby the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye."
  * Added definition dbxref GOC:dph to GO:0060223
  * Copied GO:0060223 to GO:0060220 with type OBO_REL:is_a
  * Copied GO:0060223 to GO:0060221 with type part_of
  * Assigned namespace "biological_process" to GO:0060223
* Populated new object GO:0060224 (macro)
  * Changed name of GO:0060224 from "<new term>" to "regulation of retinal rod cell fate commitment"
  * Set definition of GO:0060224 to "Any process that modulates the process whereby the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye."
  * Added definition dbxref GOC:dph to GO:0060224
  * Copied GO:0060224 to GO:0010453 with type OBO_REL:is_a
  * Copied GO:0060224 to GO:0060223 with type part_of
  * Assigned namespace "biological_process" to GO:0060224
* Populated new object GO:0060225 (macro)
  * Changed name of GO:0060225 from "<new term>" to "positive regulation of retinal rod cell fate commitment"
  * Set definition of GO:0060225 to "Any process that increases the process whereby the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye."
  * Added definition dbxref GOC:dph to GO:0060225
  * Copied GO:0060225 to GO:0060224 with type OBO_REL:is_a
  * Copied GO:0060225 to GO:0010455 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060225
* Populated new object GO:0060226 (macro)
  * Changed name of GO:0060226 from "<new term>" to "negative regulation of retinal cone cell fate commitment"
  * Set definition of GO:0060226 to "Any process that increases the process whereby a cell becomes commited to a retinal cone cell fate. Retinal cone cell fate commitment is the process whereby the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell."
  * Added definition dbxref GOC:dph to GO:0060226
  * Copied GO:0060226 to GO:0060222 with type OBO_REL:is_a
  * Copied GO:0060226 to GO:0010454 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060226
* Populated new object GO:0060227 (macro)
  * Changed name of GO:0060227 from "<new term>" to "Notch signaling pathway involved in camera-type eye photoreceptor fate commitment"
  * Set definition of GO:0060227 to "The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the commitment of a precursor cell to a eye photoreceptor fate."
  * Added definition dbxref GOC:dph to GO:0060227
  * Copied GO:0060227 to GO:0060220 with type part_of
  * Copied GO:0060227 to GO:0007219 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060227
* Deleted GO:0001905 --OBO_REL:is_a--> GO:0019835
* Changed name of GO:0007092 from "anaphase-promoting complex activation during mitotic cell cycle" to "activation of anaphase-promoting complex during mitotic cell cycle"
* Changed definition of GO:0007092 from "Any process that activates, maintains or increases the rate of the ubiquitin ligase activity of the anaphase-promoting complex during the mitotic cell cycle." to "Any process that initiates the ubiquitin ligase activity of the anaphase-promoting complex during the mitotic cell cycle."
* Added definition dbxref GOC:dph to GO:0007092
* Added definition dbxref GOC:tb to GO:0007092
* Added synonym "anaphase-promoting complex activation during mitotic cell cycle" to GO:0007092
* Changed synonym scope of GO:0007092 from "Related" to "Exact"
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"
* Deleted GO:0042670 --part_of--> GO:0060042
* Deleted GO:0042670 --OBO_REL:is_a--> GO:0001754
* Copied GO:0042670 to GO:0060219 with type OBO_REL:is_a
* Changed definition of GO:0046551 from "The process whereby the developmental fate of a cell becomes restricted such that it will develop into a camera-style eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments." to "The process whereby the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell. A retinal cone cell is one of the two photoreceptor subtypes in a camera-type eye."
* Deleted GO:0046551 --OBO_REL:is_a--> GO:0042706
* Copied GO:0046551 to GO:0060220 with type OBO_REL:is_a
* Changed name of GO:0051487 from "anaphase-promoting complex activation during meiotic cell cycle" to "activation of anaphase-promoting complex during meiotic cell cycle"
* Changed definition of GO:0051487 from "Any process that initiatiates the ubiquitin ligase activity of the anaphase-promoting complex during the meiotic cell cycle." to "Any process that initiates the ubiquitin ligase activity of the anaphase-promoting complex during the meiotic cell cycle."
* Added definition dbxref GOC:dph to GO:0051487
* Added definition dbxref GOC:tb to GO:0051487
* Added synonym "anaphase-promoting complex activation during meiotic cell cycle" to GO:0051487
* Changed synonym scope of GO:0051487 from "Related" to "Exact"
* Changed name of GO:0051488 from "anaphase-promoting complex activation" to "activation of anaphase-promoting complex"
* Changed definition of GO:0051488 from "Any process that initiatiates the ubiquitin ligase activity of the anaphase-promoting complex." to "Any process that initiates the ubiquitin ligase activity of the anaphase-promoting complex."
* Added definition dbxref GOC:dph to GO:0051488
* Added definition dbxref GOC:tb to GO:0051488
* Added synonym "anaphase-promoting complex activation" to GO:0051488
* Changed synonym scope of GO:0051488 from "Related" to "Exact"