[go-diff] GO update 02/22/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.702 by 5.705

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0060228
* Created object of type obo:TERM with id GO:0060229
* Created object of type obo:TERM with id GO:0060230
* Populated new object GO:0060228 (macro)
  * Changed name of GO:0060228 from "<new term>" to "phosphatidylcholine-sterol O-acyltransferase activator activity"
  * Set definition of GO:0060228 to "Increases the activity of phosphatidylcholine-sterol O-acyltransferase, an enzyme that converts cholesterol and phosphatidylcholine (lecithins) to cholesteryl esters and lyso-phosphatidylcholines."
  * Added definition dbxref GOC:dph to GO:0060228
  * Added definition dbxref GOC:tb to GO:0060228
  * Added definition dbxref PMID:4335615 to GO:0060228
  * Copied GO:0060228 to GO:0008047 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0060228
* Populated new object GO:0060229 (macro)
  * Changed name of GO:0060229 from "<new term>" to "lipase activator activity"
  * Set definition of GO:0060229 to "Increases the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid."
  * Added definition dbxref GOC:dph to GO:0060229
  * Added definition dbxref GOC:tb to GO:0060229
  * Copied GO:0060229 to GO:0008047 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0060229
* Populated new object GO:0060230 (macro)
  * Changed name of GO:0060230 from "<new term>" to "lipoprotein lipase activator activity"
  * Set definition of GO:0060230 to "Increases the activity of a lipoprotein lipase, an enzyme that catalyzes of the hydrolysis of a lipid within a lipoprotein."
  * Added definition dbxref GOC:dph to GO:0060230
  * Added definition dbxref GOC:tb to GO:0060230
  * Added definition dbxref PMID:10727238 to GO:0060230
  * Copied GO:0060230 to GO:0060229 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0060230
* Changed name of GO:0000083 from "regulation of G1/S-specific transcription in mitotic cell cycle" to "G1/S-specific transcription in mitotic cell cycle"
* Deleted definition dbxref GOC:dph from GO:0000083
* Deleted definition dbxref GOC:tb from GO:0000083
* Deleted synonym "G1/S-specific transcription in mitotic cell cycle" from GO:0000083
* Changed name of GO:0000114 from "regulation of G1-specific transcription in mitotic cell cycle" to "G1-specific transcription in mitotic cell cycle"
* Deleted definition dbxref GOC:dph from GO:0000114
* Deleted definition dbxref GOC:tb from GO:0000114
* Deleted synonym "G1-specific transcription in mitotic cell cycle" from GO:0000114
* Changed name of GO:0000116 from "regulation of G2-specific transcription in mitotic cell cycle" to "G2-specific transcription in mitotic cell cycle"
* Deleted definition dbxref GOC:dph from GO:0000116
* Deleted definition dbxref GOC:tb from GO:0000116
* Deleted synonym "G2-specific transcription in mitotic cell cycle" from GO:0000116
* Changed name of GO:0000117 from "regulation of G2/M-specific transcription in mitotic cell cycle" to "G2/M-specific transcription in mitotic cell cycle"
* Deleted definition dbxref GOC:dph from GO:0000117
* Deleted definition dbxref GOC:tb from GO:0000117
* Deleted synonym "G2/M-specific transcription in mitotic cell cycle" from GO:0000117
* Changed definition of GO:0000389 from "Recognition of the intron 3'-splice site by components of the assembling U12-type spliceosome." to "Recognition of the intron 3'-splice site by components of the assembling U2- or U12-type spliceosome."
* Changed definition of GO:0000436 from "Any process involving carbon catabolites that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter." to "Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter."
* Changed definition of GO:0000437 from "Any process involving carbon catabolites that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter." to "Any process involving carbon catabolites that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter."
* Changed definition of GO:0000463 from "Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule." to "Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript."
* Changed definition of GO:0001310 from "Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication." to "Increase in abundance of circular DNA molecules containing ribosomal DNA repeats in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication."
* Copied GO:0001821 to GO:0007269 with type OBO_REL:is_a
* Changed name of GO:0002220 from "innate immune response-activating cell surface receptor signaling pathway" to "innate immune response activating cell surface receptor signaling pathway"
* Changed definition of GO:0002488 from "The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family." to "The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via an ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class Ib molecule in the ER. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family."
* Changed definition of GO:0002772 from "A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of a natural killer cell capable of inhibiting an immune effector process contributing to an immune response." to "A series of molecular signals initiated by the binding of an extracellular ligand to an inhibitory C-type lectin receptor capable of inhibiting an immune effector process contributing to an immune response."
* Changed definition of GO:0002815 from "The chemical reactions and pathways resulting in the formation of an antibacterial peptide with activity against Gram-negative bacteria." to "The chemical reactions and pathways resulting in the formation of an antibacterial peptide with activity against Gram-positive bacteria."
* Changed name of GO:0003058 from "regulation of the force of heart contraction by hormone" to "hormonal regulation of the force of heart contraction"
* Changed definition of GO:0003058 from "The process by which hormones modulate the force of heart muscle contraction. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action." to "The process by which the hormones modulates the force of heart muscle contraction. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action."
* Deleted definition dbxref GOC:dph from GO:0003058
* Deleted definition dbxref GOC:tb from GO:0003058
* Deleted synonym "hormonal regulation of the force of heart contraction" from GO:0003058
* Changed definition of GO:0003117 from "Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream." to "Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream."
* Changed definition of GO:0003125 from "Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream." to "Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream."
* Changed definition of GO:0003126 from "Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels as a result of epinephrine released by nerve endings." to "Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels as a result of norepinephrine released by nerve endings."
* Changed definition of GO:0003959 from "Catalysis of the reaction: NADPH + H+ + acceptor = NADP+ + reduced acceptor." to "Catalysis of the reaction: NADPH + H+ + quinone acceptor = NADP+ + hydroquinone."
* Changed definition of GO:0004084 from "Catalysis of the reaction: L-leucine + 2-oxoglutarate = 4-methyl-2-oxopentanoate + L-glutamate." to "Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. Includes catalysis of the reaction: L-leucine + 2-oxoglutarate = 4-methyl-2-oxopentanoate + L-glutamate and anaologous reactions involving L-isoleucine and L-valine."
* Added definition dbxref GOC:mah to GO:0004084
* Changed definition of GO:0004284 from "Catalysis of the preferential cleavage of Tyr-Xaa > Trp-Xaa > Phe-Xaa > Leu-Xaa." to "Catalysis of the preferential cleavage of Arg-Xaa > Lys-Xaa."
* Changed name of GO:0004344 from "glucose dehydrogenase (acceptor) activity" to "glucose dehydrogenase activity"
* added secondary id GO:0008708 to GO:0004344
* Added general dbxref EC:1.1.-.- to GO:0004344
* Added synonym "D-glucose:(acceptor) 1-oxidoreductase" to GO:0004344
* Added general dbxref EC:1.1.99.10 to synonym D-glucose:(acceptor) 1-oxidoreductase of GO:0004344
* Changed synonym scope of GO:0004344 from "Related" to "Exact"
* Added synonym "D-glucose:acceptor 1-oxidoreductase" to GO:0004344
* Added general dbxref EC:1.1.5.2 to synonym D-glucose:acceptor 1-oxidoreductase of GO:0004344
* Changed synonym scope of GO:0004344 from "Related" to "Exact"
* Added synonym "glucose dehydrogenase (acceptor) activity" to GO:0004344
* Changed synonym scope of GO:0004344 from "Related" to "Exact"
* Added synonym "glucose dehydrogenase (decarboxylating)" to GO:0004344
* Added general dbxref EC:1.1.99.10 to synonym glucose dehydrogenase (decarboxylating) of GO:0004344
* Changed synonym scope of GO:0004344 from "Related" to "Exact"
* Deleted GO:0004344 --OBO_REL:is_a--> GO:0008708
* Copied GO:0004344 to GO:0016614 with type OBO_REL:is_a
* Changed definition of GO:0004727 from "Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate." to "Catalysis of the reaction: prenylated-protein tyrosine phosphate + H2O = prenylated-protein tyrosine + phosphate."
* Changed name of GO:0005351 from "sugar:hydrogen ion symporter activity" to "sugar:hydrogen symporter activity"
* added secondary id GO:0005403 to GO:0005351
* Added synonym "cation/sugar symporter activity" to GO:0005351
* Changed synonym scope of GO:0005351 from "Related" to "Broad"
* Added synonym "hydrogen:sugar symporter activity" to GO:0005351
* Changed synonym scope of GO:0005351 from "Related" to "Exact"
* Added synonym "hydrogen:sugar transporter activity" to GO:0005351
* Changed synonym scope of GO:0005351 from "Related" to "Broad"
* Added synonym "proton:sugar symporter activity" to GO:0005351
* Changed synonym scope of GO:0005351 from "Related" to "Exact"
* Added synonym "sugar:hydrogen ion symporter activity" to GO:0005351
* Changed synonym scope of GO:0005351 from "Related" to "Exact"
* Copied GO:0005351 to GO:0015295 with type OBO_REL:is_a
* Changed definition of GO:0005358 from "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constituitive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy." to "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constituitive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations."
* Changed definition of GO:0005362 from "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in)." to "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in). In low affinity transport the transporter is able to bind the solute only if it is present at very high concentrations."
* Deleted GO:0005364 --OBO_REL:is_a--> GO:0005403
* Copied GO:0005364 to GO:0005351 with type OBO_REL:is_a
* Deleted GO:0005403 --OBO_REL:is_a--> GO:0015295
* Deleted GO:0005403 --OBO_REL:is_a--> GO:0005402
* Deleted GO:0005364 --OBO_REL:is_a--> GO:0005403
* Deleted GO:0015519 --OBO_REL:is_a--> GO:0005403
* Deleted GO:0008506 --OBO_REL:is_a--> GO:0005403
* Deleted GO:0015528 --OBO_REL:is_a--> GO:0005403
* Deleted GO:0015518 --OBO_REL:is_a--> GO:0005403
* Deleted GO:0015529 --OBO_REL:is_a--> GO:0005403
* Deleted GO:0009679 --OBO_REL:is_a--> GO:0005403
* Destroyed object GO:0005403
* Changed definition of GO:0005606 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha1, beta1 and gamma1." to "A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains."
* Changed definition of GO:0005607 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha2, beta1 and gamma1." to "A laminin complex composed of alpha4, beta1 and gamma1 polypeptide chains."
* Changed definition of GO:0005608 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha1, beta2 and gamma1." to "A laminin complex composed of alpha1, beta2 and gamma1 polypeptide chains."
* Changed definition of GO:0005609 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha2, beta2 and gamma1." to "A laminin complex composed of alpha2, beta2 and gamma1 polypeptide chains."
* Changed definition of GO:0005610 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha3, beta3 and gamma2." to "A laminin complex composed of alpha3, beta3 and gamma2 polypeptide chains."
* Changed definition of GO:0005611 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha3, beta1 and gamma1." to "A laminin complex composed of alpha3, beta1 and gamma1 polypeptide chains."
* Changed definition of GO:0005612 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha3, beta2 and gamma1." to "A laminin complex composed of alpha3, beta2 and gamma1 polypeptide chains."
* Changed name of GO:0005969 from "serine-pyruvate aminotransferase, type 2B complex" to "serine-pyruvate aminotransferase complex"
* added secondary id GO:0005970 to GO:0005969
* Added synonym "serine-pyruvate aminotransferase, type 1 complex" to GO:0005969
* Changed synonym scope of GO:0005969 from "Related" to "Narrow"
* Added synonym "serine-pyruvate aminotransferase, type 2B complex" to GO:0005969
* Changed synonym scope of GO:0005969 from "Related" to "Narrow"
* Deleted GO:0005970 --OBO_REL:is_a--> GO:0043234
* Deleted GO:0005970 --OBO_REL:is_a--> GO:0044444
* Destroyed object GO:0005970
* Changed name of GO:0006985 from "activation of NF-kappaB by ER overload" to "EOR-mediated activation of NF-kappaB"
* Deleted synonym "EOR-mediated activation of NF-kappaB" from GO:0006985
* Changed synonym scope of GO:0006985 from "Related" to "Exact"
* Changed definition of GO:0007055 from "The formation of the spindle during meiosis I of a meiotic cell cycle in males. As in, but not restricted to, the multicellular animals (Metazoa, ncbi_taxonomy_id:33208)." to "The formation of the spindle during meiosis II of a meiotic cell cycle in males. As in, but not restricted to, the multicellular animals (Metazoa, ncbi_taxonomy_id:33208)."
* Changed definition of GO:0007294 from "Process by which a cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed." to "Process by which a germarium-derived cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed."
* Changed definition of GO:0007567 from "The process of giving birth to live offspring or eggs." to "The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs."
* Changed definition of GO:0008294 from "Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate." to "Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin."
* Added definition dbxref GOC:mah to GO:0008294
* Changed definition of GO:0008420 from "Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate." to "Catalysis of the reaction: phospho-(DNA-directed RNA polymerase) + H2O = (DNA-directed RNA polymerase) + phosphate."
* Deleted GO:0008506 --OBO_REL:is_a--> GO:0005403
* Copied GO:0008506 to GO:0005351 with type OBO_REL:is_a
* Deleted GO:0008708 --OBO_REL:is_a--> GO:0016614
* Deleted GO:0008876 --OBO_REL:is_a--> GO:0008708
* Deleted GO:0004344 --OBO_REL:is_a--> GO:0008708
* Destroyed object GO:0008708
* Deleted GO:0008876 --OBO_REL:is_a--> GO:0008708
* Copied GO:0008876 to GO:0004344 with type OBO_REL:is_a
* Changed definition of GO:0009573 from "A complex containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate." to "A complex, located in the chloroplast, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate."
* Deleted GO:0009679 --OBO_REL:is_a--> GO:0005403
* Copied GO:0009679 to GO:0005351 with type OBO_REL:is_a
* Changed definition of GO:0014708 from "The process whose specific outcome is the progression of the somitomeric trunk muscle over time, from its formation to the mature structure. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle." to "Any process that modulates the frequency, rate or extent of somitomeric trunk muscle development."
* Changed name of GO:0014843 from "regulation of satellite cell proliferation by growth factor" to "growth factor dependent regulation of satellite cell proliferation"
* Deleted definition dbxref GOC:dph from GO:0014843
* Deleted definition dbxref GOC:tb from GO:0014843
* Deleted synonym "growth factor dependent regulation of satellite cell proliferation" from GO:0014843
* Changed definition of GO:0015361 from "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in)." to "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In low affinity transport the transporter is able to bind the solute only if it is present at very high concentrations."
* Changed definition of GO:0015362 from "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in)." to "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations."
* Deleted GO:0015518 --OBO_REL:is_a--> GO:0005403
* Copied GO:0015518 to GO:0005351 with type OBO_REL:is_a
* Deleted GO:0015519 --OBO_REL:is_a--> GO:0005403
* Copied GO:0015519 to GO:0005351 with type OBO_REL:is_a
* Deleted GO:0015528 --OBO_REL:is_a--> GO:0005403
* Copied GO:0015528 to GO:0005351 with type OBO_REL:is_a
* Deleted GO:0015529 --OBO_REL:is_a--> GO:0005403
* Copied GO:0015529 to GO:0005351 with type OBO_REL:is_a
* Deleted GO:0016004 --OBO_REL:is_a--> GO:0008047
* Copied GO:0016004 to GO:0060229 with type OBO_REL:is_a
* Deleted GO:0016245 --OBO_REL:is_a--> GO:0045944
* Copied GO:0016245 to GO:0006357 with type OBO_REL:is_a
* Changed definition of GO:0017018 from "Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate." to "Catalysis of the reaction: phosphomysoin + H2O = myosin + phosphate."
* Changed definition of GO:0018167 from "The linkage of the chromophore phycoerythrobilin to phycoerythrin." to "The linkage of the chromophore phycoerythrobilin to phycoerythrin via phycoerythrobilin-bis-L-cysteine."
* Changed definition of GO:0021540 from "The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres." to "The process by which the anatomical structures of the corpus callosum are generated and organized. Morphogenesis pertains to the creation of form. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres."
* Deleted GO:0021540 --part_of--> GO:0021537
* Copied GO:0021540 to GO:0022038 with type part_of
* Deleted definition dbxref GOC:tb from GO:0021875
* Deleted general dbxref GOC:tb from synonym fibroblast growth factor receptor signalling pathway in forebrain neuroblast division of GO:0021875
* Deleted general dbxref GOC:dph from synonym fibroblast growth factor receptor signalling pathway in forebrain neuroblast division of GO:0021875
* Changed name of GO:0022003 from "fibroblast growth factor receptor signaling pathway involved in negative regulation of anterior neural cell fate commitment of the neural plate" to "fgf receptor signaling involved in negative regulation of anterior neural cell fate commitment of the neural plate"
* Deleted GO:0022003 --OBO_REL:is_a--> GO:0008543
* Deleted GO:0030189 --OBO_REL:is_a--> GO:0008047
* Changed definition of GO:0030938 from "A collagen homotrimer of alpha1(XII) chains; type XII collagen triple helices may link sheet-forming or fibrillar collagens to other structures." to "A collagen homotrimer of alpha1(XVIII) chains."
* Changed definition of GO:0032326 from "The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands." to "The chemical reactions and pathways resulting in the breakdown of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands."
* Added comment "Note that this enzyme differs from EC 1.1.1.187, GDP-4-dehydro-D-rhamnose reductase, in that the only product formed is GDP-D-rhamnose (GDP-6-deoxy-D-mannose)."
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"
* Changed definition of GO:0042356 from "Catalysis of the reaction: GDP-6-deoxy-D-mannose + NADP+ = GDP-4-dehydro-6-deoxy-D-mannose + NADPH + H+." to "Catalysis of the reaction: GDP-6-deoxy-D-mannose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-mannose + NAD(P)H + H+. In the reverse reaction, a mixture of GDP-D-rhamnose and its C-4 epimer is formed."
* Added definition dbxref BRENDA:1.1.1.187 to GO:0042356
* Changed definition of GO:0043257 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha2, beta1 and gamma1." to "A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains."
* Changed definition of GO:0043258 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha4, beta2 and gamma1." to "A laminin complex composed of alpha4, beta2 and gamma1 polypeptide chains."
* Changed definition of GO:0043259 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha5, beta1 and gamma1." to "A laminin complex composed of alpha5, beta1 and gamma1 polypeptide chains."
* Changed definition of GO:0043260 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha5, beta2 and gamma1." to "A laminin complex composed of alpha5, beta2 and gamma1 polypeptide chains."
* Changed definition of GO:0043261 from "A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha2, beta1 and gamma3." to "A laminin complex composed of alpha2, beta1 and gamma3 polypeptide chains."
* Changed definition of GO:0047026 from "Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione." to "Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+."
* Changed definition of GO:0047042 from "Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione." to "Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+."
* Changed definition of GO:0048142 from "The four rounds of incomplete mitosis undergone by the cystoblast to form a 16-cell cyst. Within the cyst, one cell differentiates into an oocyte while the rest become nurse cells." to "The four rounds of incomplete mitosis undergone by a cystoblast derived from the germarium to form a 16-cell cyst. Within the cyst, one cell differentiates into an oocyte while the rest become nurse cells."
* Changed definition of GO:0048494 from "A complex containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate." to "A complex, located in the chromatophore, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate."
* Changed definition of GO:0050309 from "Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate." to "Catalysis of the reaction: H2O + a sugar phosphate = a sugar + phosphate; an example is D-glucose 6-phosphate + H2O = D-glucose + phosphate."
* Deleted GO:0050309 --OBO_REL:is_a--> GO:0016791
* Copied GO:0050309 to GO:0019203 with type OBO_REL:is_a
* Changed definition of GO:0052130 from "The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen." to "The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen."
* Added definition dbxref GOC:dph to GO:0052130
* Changed definition of GO:0052131 from "The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen." to "The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen."
* Added definition dbxref GOC:dph to GO:0052131
* Copied GO:0052216 to GO:0006935 with type OBO_REL:is_a
* Copied GO:0052217 to GO:0009454 with type OBO_REL:is_a
* Copied GO:0052220 to GO:0052131 with type OBO_REL:is_a
* Copied GO:0052222 to GO:0052130 with type OBO_REL:is_a