[go-diff] GO update 01/10/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.640 by 5.641

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Changed definition of GO:0000709 from "The conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule. These joint molecules contain Holliday junctions on either side of heteroduplex DNA." to "The conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination. These joint molecules contain Holliday junctions on either side of heteroduplex DNA."
* Changed definition of GO:0000775 from "The central region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single
area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome." to "The central region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome."
* Changed definition of GO:0000779 from "The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single
area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome." to "The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome."
* Changed definition of GO:0000780 from "The central region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single
area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome." to "The central region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome."
* Changed definition of GO:0010510 from "Any process that modulates the
frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate." to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate."
* Changed definition of GO:0031533 from "A protein complex that possesses RNA (guanine-N7) methyltransferase activity and carries out mRNA capping. The fungal mRNA capping apparatus consists of three subunits, a RNA 5' triphosphatase RNA guanyl transferase and mRNA (guanine-N7) methyltransferase activities (Cet1p, Ceg1p, and Abd1p in S. cerevisiae). In mammalian sytems Cet1 and Ceg1 are replaced by a bifunctional triphosphatase/guanyltransferase." to "A protein complex that consists of an RNA 5' triphosphatase and a guanyl transferase (Cet1p and Ceg1p in S. cerevisiae; Pct1 and Ceg1 in Sz. pombe) and is involved in mRNA capping."
* Changed definition of GO:0033596 from "A heterodimeric protein complex consisting of tumerin and hamartin; its formation may regulate hamartin homomultimer formation. The complex acts as a GTPase activating protein (GAP) for the small GTPase
(Rheb), and inhibits the TOR signaling pathway." to "A heterodimeric protein complex consisting of tumerin and hamartin; its formation may regulate hamartin homomultimer formation. The complex acts as a GTPase activating protein (GAP) for the small GTPase (Rheb), and inhibits the TOR signaling pathway."
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"
* Changed definition of GO:0034068 from "Catalysis of the reaction nucleoside
triphosphate + aminoglycoside = diphosphate + nucleotidylaminoglycoside." to "Catalysis of the reaction nucleoside triphosphate + aminoglycoside = diphosphate + nucleotidylaminoglycoside."
* Changed definition of GO:0034070 from "Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA +
1-N-acetylaminoglycoside. This is acetylation of the 1-amino group of the
central deoxystreptamine ring." to "Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + 1-N-acetylaminoglycoside. This is acetylation of the 1-amino group of the central deoxystreptamine ring."