[go-diff] GO update 01/21/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_edit.obo version 5.657 by 5.659

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0034207
* Created object of type obo:TERM with id GO:0034208
* Created object of type obo:TERM with id GO:0034209
* Created object of type obo:TERM with id GO:0034210
* Created object of type obo:TERM with id GO:0034211
* Created object of type obo:TERM with id GO:0034212
* Created object of type obo:TERM with id GO:0060197
* Populated new object GO:0034207 (macro)
  * Changed name of GO:0034207 from "<new term>" to "steroid acetylation"
  * Set definition of GO:0034207 to "The addition of an acetyl group to a steroid molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid."
  * Added definition dbxref GOC:mah to GO:0034207
  * Copied GO:0034207 to GO:0008202 with type OBO_REL:is_a
  * Copied GO:0034207 to GO:0030258 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034207
* Populated new object GO:0034208 (macro)
  * Changed name of GO:0034208 from "<new term>" to "steroid deacetylation"
  * Set definition of GO:0034208 to "The removal of an acetyl group from a steroid molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid."
  * Added definition dbxref GOC:mah to GO:0034208
  * Copied GO:0034208 to GO:0008202 with type OBO_REL:is_a
  * Copied GO:0034208 to GO:0030258 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034208
* Populated new object GO:0034209 (macro)
  * Changed name of GO:0034209 from "<new term>" to "sterol acetylation"
  * Set definition of GO:0034209 to "The addition of an acetyl group to a steroid molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid."
  * Added definition dbxref GOC:rb to GO:0034209
  * Added definition dbxref PMID:18034159 to GO:0034209
  * Copied GO:0034209 to GO:0034207 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034209
* Populated new object GO:0034210 (macro)
  * Changed name of GO:0034210 from "<new term>" to "sterol deacetylation"
  * Set definition of GO:0034210 to "The removal of an acetyl group from a steroid molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid."
  * Added definition dbxref GOC:rb to GO:0034210
  * Added definition dbxref PMID:18034159 to GO:0034210
  * Copied GO:0034210 to GO:0034208 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034210
* Populated new object GO:0034211 (macro)
  * Changed name of GO:0034211 from "<new term>" to "GTP-dependent protein kinase activity"
  * Set definition of GO:0034211 to "Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of GTP."
  * Added definition dbxref GOC:ecd to GO:0034211
  * Added definition dbxref PMID:17200152 to GO:0034211
  * Added general dbxref EC:2.7.11.- to GO:0034211
  * Added general dbxref Reactome:13522 to GO:0034211
  * Copied GO:0034211 to GO:0004674 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034211
* Populated new object GO:0034212 (macro)
  * Changed name of GO:0034212 from "<new term>" to "peptide N-acetyltransferase activity"
  * Set definition of GO:0034212 to "Catalysis of the acetylation of an amino acid residue of a peptide or protein, according to the reaction: acetyl-CoA + peptide = CoA + N-acetylpeptide."
  * Added definition dbxref GOC:mah to GO:0034212
  * Copied GO:0034212 to GO:0008080 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034212
* Populated new object GO:0060197 (macro)
  * Changed name of GO:0060197 from "<new term>" to "cloacal septation"
  * Set definition of GO:0060197 to "The separation of the single opening of the digestive, urinary, and reproductive tracts, the cloacea, into multiple isolated openings during development."
  * Added definition dbxref GOC:dph to GO:0060197
  * Added definition dbxref GOC:st to GO:0060197
  * Copied GO:0060197 to GO:0048546 with type part_of
  * Copied GO:0060197 to GO:0035239 with type OBO_REL:is_a
  * Copied GO:0060197 to GO:0001655 with type part_of
  * Assigned namespace "biological_process" to GO:0060197
* Changed definition of GO:0004596 from "Catalysis of the reaction: acetyl-CoA + peptide = CoA + N-alpha-acetylpeptide." to "Catalysis of the acetylation of the N-terminal amino acid residue of a peptide or protein, according to the reaction: acetyl-CoA + peptide = CoA + N-alpha-acetylpeptide."
* Added definition dbxref GOC:mah to GO:0004596
* Deleted GO:0004596 --OBO_REL:is_a--> GO:0008080
* Copied GO:0004596 to GO:0034212 with type OBO_REL:is_a
* Copied GO:0005958 to GO:0044428 with type OBO_REL:is_a
* Deleted GO:0019799 --OBO_REL:is_a--> GO:0004596
* Copied GO:0019799 to GO:0034212 with type OBO_REL:is_a
* Changed definition of GO:0030258 from "The covalent alteration of one or more fatty acids in a lipid, resulting in a change in that lipid." to "The covalent alteration of one or more fatty acids in a lipid, resulting in a change in the properties of the lipid."
* Deleted GO:0030258 --OBO_REL:is_a--> GO:0043412
* Copied GO:0030258 to GO:0043170 with type OBO_REL:is_a
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"