[Go-diff] GO update 07/30/2008

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Wed Jul 30 21:30:45 PDT 2008


OBODIFF of gene_ontology_write.obo version 1.146 by 1.147

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0034624
* Created object of type obo:TERM with id GO:0034625
* Created object of type obo:TERM with id GO:0034626
* Populated new object GO:0034624 (macro)
  * Changed name of GO:0034624 from "<new term>" to "DNA recombinase assembly involved in gene conversion at mating-type locus"
  * Set definition of GO:0034624 to "The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) into higher order oligomers on single-stranded DNA, involved in the conversion of the mating-type locus from one allele to another."
  * Added definition dbxref GOC:mah to GO:0034624
  * Copied GO:0034624 to GO:0000730 with type OBO_REL:is_a
  * Copied GO:0034624 to GO:0007534 with type part_of
  * Assigned namespace "biological_process" to GO:0034624
* Populated new object GO:0034625 (macro)
  * Changed name of GO:0034625 from "<new term>" to "fatty acid elongation, monounsaturated fatty acid"
  * Set definition of GO:0034625 to "Elongation of a fatty acid chain into which one C-C double bond has been introduced."
  * Added definition dbxref GOC:mah to GO:0034625
  * Added GO:0034625 to category gosubset_prok
  * Copied GO:0034625 to GO:0019368 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034625
* Populated new object GO:0034626 (macro)
  * Changed name of GO:0034626 from "<new term>" to "fatty acid elongation, polyunsaturated fatty acid"
  * Set definition of GO:0034626 to "Elongation of a fatty acid chain into which two or more C-C double bonds have been introduced."
  * Added definition dbxref GOC:mah to GO:0034626
  * Added GO:0034626 to category gosubset_prok
  * Copied GO:0034626 to GO:0019368 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034626
* Deleted GO:0000730 --part_of--> GO:0007534
* Deleted GO:0000730 --OBO_REL:is_a--> GO:0006461
* Copied GO:0007533 to GO:0022413 with type OBO_REL:is_a
* Deleted GO:0020010 --OBO_REL:is_a--> GO:0005874
* Copied GO:0020010 to GO:0044430 with type OBO_REL:is_a
* Copied GO:0031574 to GO:0007093 with type OBO_REL:is_a
* Changed definition of GO:0033289 from "A microtubule located within the conoid." to "A microtubule located such that it threads through the conoid and projects through the polar ring."
* Added definition dbxref PMID:11901169 to GO:0033289
* Changed definition of GO:0043679 from "The nerve ending is the structure in which the distal end of the axon of a nerve fiber terminates. Sensory nerve endings are classified as either free or encapsulated. The free nerve ending are the most common type of nerve ending, and are most frequently found in the skin." to "A cell projection in which the distal end of the axon of a nerve fiber terminates. Sensory nerve endings are classified as either free or encapsulated. The free nerve ending are the most common type of nerve ending, and are most frequently found in the skin."
* Added definition dbxref GOC:mah to GO:0043679
* Deleted GO:0043679 --part_of--> GO:0043005
* Copied GO:0043679 to GO:0033267 with type OBO_REL:is_a


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