[Go-diff] GO update 06/05/2008

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Thu Jun 5 21:30:46 PDT 2008 

OBODIFF of gene_ontology_write.obo version 1.95 by 1.98

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0043917
* Created object of type obo:TERM with id GO:0043918
* Populated new object GO:0043917 (macro)
  * Changed name of GO:0043917 from "<new term>" to "ribose 1,5-bisphosphate isomerase activity"
  * Set definition of GO:0043917 to "Catalysis of the reaction: D-ribose 1,5-bisphosphate = D-ribulose 1,5-bisphosphate."
  * Added definition dbxref GOC:jl to GO:0043917
  * Added definition dbxref IMG:03024 to GO:0043917
  * Added general dbxref EC:5.3.1.- to GO:0043917
  * Added general dbxref IMG:03024 to GO:0043917
  * Added GO:0043917 to category gosubset_prok
  * Added synonym "ribose-1,5-bisphosphate isomerase activity" to GO:0043917
  * Changed synonym scope of GO:0043917 from "Related" to "Exact"
  * Copied GO:0043917 to GO:0016861 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0043917
* Populated new object GO:0043918 (macro)
  * Changed name of GO:0043918 from "<new term>" to "cadaverine aminopropyltransferase activity"
  * Set definition of GO:0043918 to "Catalysis of the reaction: S-adenosylmethioninamine + cadaverine = 5'-methylthioadenosine + N-(3-aminopropyl)cadaverine."
  * Added definition dbxref GOC:jl to GO:0043918
  * Added definition dbxref IMG:00522 to GO:0043918
  * Added definition dbxref PMID:17545282 to GO:0043918
  * Added general dbxref EC:2.5.1.- to GO:0043918
  * Added general dbxref IMG:00522 to GO:0043918
  * Added GO:0043918 to category gosubset_prok
  * Added synonym "cadaverine aminopropyl transferase activity" to GO:0043918
  * Changed synonym scope of GO:0043918 from "Related" to "Exact"
  * Copied GO:0043918 to GO:0016765 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0043918
* Deleted GO:0001894 --OBO_REL:is_a--> GO:0042592
* Copied GO:0002759 to GO:0043900 with type OBO_REL:is_a
* Copied GO:0002760 to GO:0043902 with type OBO_REL:is_a
* Copied GO:0008348 to GO:0043901 with type OBO_REL:is_a
* Copied GO:0010112 to GO:0043900 with type OBO_REL:is_a
* Copied GO:0010113 to GO:0043901 with type OBO_REL:is_a
* Set definition of GO:0016861 to "Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears."
* Added definition dbxref GOC:jl to GO:0016861
* Set definition of GO:0016862 to "Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is a keto- or an enol-group, are the same molecule, and no oxidized product appears."
* Added definition dbxref GOC:jl to GO:0016862
* Deleted GO:0030420 --OBO_REL:is_a--> GO:0009294
* Copied GO:0030420 to GO:0031668 with type OBO_REL:is_a
* Copied GO:0030420 to GO:0009294 with type part_of
* Deleted GO:0031135 --OBO_REL:is_a--> GO:0048519
* Copied GO:0031135 to GO:0043901 with type OBO_REL:is_a
* Deleted GO:0031136 --OBO_REL:is_a--> GO:0048518
* Copied GO:0031136 to GO:0043902 with type OBO_REL:is_a
* Deleted GO:0032974 --OBO_REL:is_a--> GO:0007034
* Deleted GO:0033666 --OBO_REL:is_a--> GO:0048518
* Copied GO:0033666 to GO:0043902 with type OBO_REL:is_a
* Deleted GO:0033667 --OBO_REL:is_a--> GO:0048519
* Copied GO:0033667 to GO:0043901 with type OBO_REL:is_a
* Deleted GO:0042786 --OBO_REL:is_a--> GO:0051813
* Deleted GO:0045304 --OBO_REL:is_a--> GO:0050789
* Copied GO:0045304 to GO:0050794 with type OBO_REL:is_a
* Deleted GO:0045808 --OBO_REL:is_a--> GO:0048519
* Copied GO:0045808 to GO:0048523 with type OBO_REL:is_a
* Deleted GO:0045809 --OBO_REL:is_a--> GO:0048518
* Copied GO:0045809 to GO:0048522 with type OBO_REL:is_a
* Deleted GO:0046999 --OBO_REL:is_a--> GO:0050789
* Copied GO:0046999 to GO:0043900 with type OBO_REL:is_a
* Copied GO:0050687 to GO:0043901 with type OBO_REL:is_a
* Copied GO:0050688 to GO:0043900 with type OBO_REL:is_a
* Deleted GO:0051813 --OBO_REL:is_a--> GO:0051810
* Copied GO:0051813 to GO:0042786 with type OBO_REL:is_a
* Copied GO:0052063 to GO:0052509 with type OBO_REL:is_a
* Copied GO:0052064 to GO:0052509 with type OBO_REL:is_a
* Deleted GO:0052068 --OBO_REL:is_a--> GO:0052037
* Copied GO:0052068 to GO:0052562 with type OBO_REL:is_a
* Deleted GO:0052075 --OBO_REL:is_a--> GO:0052509
* Copied GO:0052075 to GO:0052556 with type OBO_REL:is_a
* Copied GO:0052078 to GO:0052037 with type OBO_REL:is_a
* Deleted GO:0052088 --OBO_REL:is_a--> GO:0052031
* Copied GO:0052088 to GO:0052553 with type OBO_REL:is_a
* Copied GO:0052170 to GO:0052562 with type OBO_REL:is_a
* Copied GO:0052230 to GO:0032386 with type OBO_REL:is_a
* Copied GO:0052231 to GO:0050764 with type OBO_REL:is_a
* Copied GO:0052248 to GO:0043067 with type OBO_REL:is_a
* Copied GO:0052255 to GO:0031347 with type OBO_REL:is_a
* Copied GO:0052256 to GO:0050727 with type OBO_REL:is_a
* Copied GO:0052259 to GO:0050729 with type OBO_REL:is_a
* Copied GO:0052260 to GO:0050728 with type OBO_REL:is_a
* Copied GO:0052261 to GO:0031348 with type OBO_REL:is_a
* Copied GO:0052298 to GO:0002831 with type OBO_REL:is_a
* Copied GO:0052298 to GO:0045088 with type OBO_REL:is_a
* Copied GO:0052299 to GO:0010112 with type OBO_REL:is_a
* Copied GO:0052312 to GO:0045449 with type OBO_REL:is_a
* Copied GO:0052433 to GO:0042981 with type OBO_REL:is_a
* Copied GO:0052459 to GO:0043070 with type OBO_REL:is_a
* Copied GO:0052490 to GO:0043069 with type OBO_REL:is_a
* Copied GO:0052501 to GO:0043065 with type OBO_REL:is_a
* Copied GO:0052510 to GO:0031349 with type OBO_REL:is_a
* Copied GO:0052518 to GO:0043071 with type OBO_REL:is_a
* Copied GO:0052522 to GO:0050766 with type OBO_REL:is_a
* Copied GO:0052532 to GO:0052510 with type OBO_REL:is_a
* Copied GO:0052532 to GO:0002833 with type OBO_REL:is_a
* Copied GO:0052532 to GO:0045089 with type OBO_REL:is_a
* Copied GO:0052533 to GO:0052509 with type OBO_REL:is_a
* Copied GO:0052535 to GO:0045089 with type OBO_REL:is_a
* Copied GO:0052535 to GO:0002833 with type OBO_REL:is_a
* Copied GO:0052535 to GO:0052510 with type OBO_REL:is_a
* Copied GO:0052537 to GO:0052509 with type OBO_REL:is_a
* Copied GO:0052552 to GO:0050776 with type OBO_REL:is_a
* Copied GO:0052555 to GO:0050778 with type OBO_REL:is_a
* Copied GO:0052561 to GO:0050777 with type OBO_REL:is_a

More information about the Go-diff mailing list