[Go-diff] GO update 06/06/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_write.obo version 1.98 by 1.99

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0060262
* Created object of type obo:TERM with id GO:0060263
* Created object of type obo:TERM with id GO:0060264
* Created object of type obo:TERM with id GO:0060265
* Created object of type obo:TERM with id GO:0060266
* Created object of type obo:TERM with id GO:0060267
* Created object of type obo:TERM with id GO:0060268
* Populated new object GO:0060262 (macro)
  * Changed name of GO:0060262 from "<new term>" to "negative regulation of N-terminal protein palmitoylation"
  * Set definition of GO:0060262 to "Any process that decreases the rate frequency or extent of the covalent or non-covalent attachment of a palmitoyl moiety to the N-terminal amino acid residue of a protein."
  * Added definition dbxref GOC:dph to GO:0060262
  * Added definition dbxref GOC:tb to GO:0060262
  * Copied GO:0060262 to GO:0050748 with type OBO_REL:is_a
  * Copied GO:0060262 to GO:0010558 with type OBO_REL:is_a
  * Copied GO:0060262 to GO:0006500 with type negatively_regulates
  * Copied GO:0060262 to GO:0060254 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060262
* Populated new object GO:0060263 (macro)
  * Changed name of GO:0060263 from "<new term>" to "regulation of respiratory burst"
  * Set definition of GO:0060263 to "Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals."
  * Added definition dbxref GOC:dph to GO:0060263
  * Added definition dbxref GOC:tb to GO:0060263
  * Copied GO:0060263 to GO:0019222 with type OBO_REL:is_a
  * Copied GO:0060263 to GO:0045730 with type regulates
  * Assigned namespace "biological_process" to GO:0060263
* Populated new object GO:0060264 (macro)
  * Changed name of GO:0060264 from "<new term>" to "regulation of respiratory burst during acute inflammatory response"
  * Set definition of GO:0060264 to "Any process that modulates the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense reponse ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals."
  * Added definition dbxref GOC:dph to GO:0060264
  * Added definition dbxref GOC:rl to GO:0060264
  * Added definition dbxref GOC:tb to GO:0060264
  * Copied GO:0060264 to GO:0002536 with type regulates
  * Copied GO:0060264 to GO:0060263 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060264
* Populated new object GO:0060265 (macro)
  * Changed name of GO:0060265 from "<new term>" to "positive regulation of respiratory burst during acute inflammatory response"
  * Set definition of GO:0060265 to "Any process that increases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense reponse ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals."
  * Added definition dbxref GOC:dph to GO:0060265
  * Added definition dbxref GOC:tb to GO:0060265
  * Copied GO:0060265 to GO:0002536 with type positively_regulates
  * Copied GO:0060265 to GO:0060264 with type OBO_REL:is_a
  * Copied GO:0060265 to GO:0060267 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060265
* Populated new object GO:0060266 (macro)
  * Changed name of GO:0060266 from "<new term>" to "negative regulation of respiratory burst during acute inflammatory response"
  * Set definition of GO:0060266 to "Any process that decreases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense reponse ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals."
  * Added definition dbxref GOC:dph to GO:0060266
  * Added definition dbxref GOC:tb to GO:0060266
  * Copied GO:0060266 to GO:0060264 with type OBO_REL:is_a
  * Copied GO:0060266 to GO:0002536 with type negatively_regulates
  * Copied GO:0060266 to GO:0060268 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060266
* Populated new object GO:0060267 (macro)
  * Changed name of GO:0060267 from "<new term>" to "positive regulation of respiratory burst"
  * Set definition of GO:0060267 to "Any process that increases the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals."
  * Added definition dbxref GOC:dph to GO:0060267
  * Added definition dbxref GOC:tb to GO:0060267
  * Copied GO:0060267 to GO:0045730 with type positively_regulates
  * Copied GO:0060267 to GO:0060263 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060267
* Populated new object GO:0060268 (macro)
  * Changed name of GO:0060268 from "<new term>" to "negative regulation of respiratory burst"
  * Set definition of GO:0060268 to "Any process that decreases the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals."
  * Added definition dbxref GOC:dph to GO:0060268
  * Added definition dbxref GOC:tb to GO:0060268
  * Copied GO:0060268 to GO:0060263 with type OBO_REL:is_a
  * Copied GO:0060268 to GO:0045730 with type negatively_regulates
  * Assigned namespace "biological_process" to GO:0060268
* Copied GO:0004861 to GO:0016538 with type OBO_REL:is_a
* Added synonym "circadian regulation of cytosolic calcium ion homeostasis" to GO:0010617
* Added general dbxref GOC:tb to synonym circadian regulation of cytosolic calcium ion homeostasis of GO:0010617
* Added general dbxref GOC:dph to synonym circadian regulation of cytosolic calcium ion homeostasis of GO:0010617
* Changed synonym scope of GO:0010617 from "Related" to "Exact"
* Copied GO:0010617 to GO:0051480 with type OBO_REL:is_a
* Deleted GO:0045730 --OBO_REL:is_a--> GO:0009893
* Copied GO:0045730 to GO:0008152 with type OBO_REL:is_a