[Go-diff] GO update 06/16/2008

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Mon Jun 16 21:30:48 PDT 2008 

OBODIFF of gene_ontology_write.obo version 1.108 by 1.111

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0043921
* Created object of type obo:TERM with id GO:0043922
* Created object of type obo:TERM with id GO:0043923
* Created object of type obo:TERM with id GO:0043924
* Populated new object GO:0043921 (macro)
  * Changed name of GO:0043921 from "<new term>" to "modulation by host of viral transcription"
  * Set definition of GO:0043921 to "Any process by which a host organism modulates the frequency, rate or extent of viral transcription, the synthesis of either RNA on a template of DNA or DNA on a template of RNA."
  * Added definition dbxref GOC:jl to GO:0043921
  * Added synonym "regulation by host of viral transcription" to GO:0043921
  * Changed synonym scope of GO:0043921 from "Related" to "Exact"
  * Added synonym "regulation of viral transcription by host " to GO:0043921
  * Changed synonym scope of GO:0043921 from "Related" to "Exact"
  * Copied GO:0043921 to GO:0052472 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0043921
* Populated new object GO:0043922 (macro)
  * Changed name of GO:0043922 from "<new term>" to "negative regulation by host of viral transcription"
  * Set definition of GO:0043922 to "Any process by which a host organism stops, prevents or reduces the frequency, rate or extent of viral transcription, the synthesis of either RNA on a template of DNA or DNA on a template of RNA."
  * Added definition dbxref GOC:jl to GO:0043922
  * Added synonym "negative regulation of viral transcription by host" to GO:0043922
  * Changed synonym scope of GO:0043922 from "Related" to "Exact"
  * Copied GO:0043922 to GO:0016481 with type OBO_REL:is_a
  * Copied GO:0043922 to GO:0043921 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0043922
* Populated new object GO:0043923 (macro)
  * Changed name of GO:0043923 from "<new term>" to "positive regulation by host of viral transcription"
  * Set definition of GO:0043923 to "Any process by which a host organism activates or increases the frequency, rate or extent of viral transcription, the synthesis of either RNA on a template of DNA or DNA on a template of RNA."
  * Added definition dbxref GOC:jl to GO:0043923
  * Added synonym "positive regulation of viral transcription by host" to GO:0043923
  * Changed synonym scope of GO:0043923 from "Related" to "Exact"
  * Copied GO:0043923 to GO:0043921 with type OBO_REL:is_a
  * Copied GO:0043923 to GO:0045941 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0043923
* Populated new object GO:0043924 (macro)
  * Changed name of GO:0043924 from "<new term>" to "suramin binding"
  * Set definition of GO:0043924 to "Interacting selectively with suramin, a naphthalenesulfonic acid compound which is used in the treatment of diseases caused by trypanosomes and worms."
  * Added definition dbxref CHEBI:45906 to GO:0043924
  * Added definition dbxref GOC:jl to GO:0043924
  * Added definition dbxref http://en.wikipedia.org/wiki/Suramin to GO:0043924
  * Added synonym "Germanin binding" to GO:0043924
  * Changed synonym scope of GO:0043924 from "Related" to "Exact"
  * Copied GO:0043924 to GO:0005488 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0043924
* Copied GO:0000960 to GO:0031329 with type OBO_REL:is_a
* Copied GO:0000961 to GO:0031330 with type OBO_REL:is_a
* Copied GO:0000961 to GO:0051253 with type OBO_REL:is_a
* Copied GO:0000962 to GO:0051254 with type OBO_REL:is_a
* Copied GO:0000962 to GO:0031331 with type OBO_REL:is_a
* Deleted GO:0005963 --OBO_REL:is_a--> GO:0043234
* Copied GO:0005963 to GO:0008287 with type OBO_REL:is_a
* Deleted GO:0009117 --OBO_REL:is_a--> GO:0034404
* Copied GO:0016481 to GO:0010558 with type OBO_REL:is_a
* Added synonym "oxo-acid lyase activity" to GO:0016833
* Changed synonym scope of GO:0016833 from "Related" to "Exact"
* Added synonym "oxoacid lyase activity" to GO:0016833
* Changed synonym scope of GO:0016833 from "Related" to "Exact"
* Deleted GO:0017059 --OBO_REL:is_a--> GO:0043234
* Copied GO:0017059 to GO:0031211 with type OBO_REL:is_a
* Changed name of GO:0019056 from "modification by virus of host cell transcription" to "modulation by virus of host transcription"
* Added synonym "modification by virus of host transcription" to GO:0019056
* Changed synonym scope of GO:0019056 from "Related" to "Exact"
* Copied GO:0019056 to GO:0052026 with type OBO_REL:is_a
* Changed definition of GO:0019057 from "The modulation of transcription of cellular protein-coding genes by host RNA polymerase II." to "Any process by which a virus modulates the frequency, rate or extent of translation of host mRNA."
* Copied GO:0033668 to GO:0043066 with type OBO_REL:is_a
* Deleted GO:0042996 --OBO_REL:is_a--> GO:0032386
* Copied GO:0042996 to GO:0033157 with type OBO_REL:is_a
* Copied GO:0042997 to GO:0051224 with type OBO_REL:is_a
* Copied GO:0042998 to GO:0051222 with type OBO_REL:is_a
* Copied GO:0043301 to GO:0051048 with type OBO_REL:is_a
* Copied GO:0043302 to GO:0051047 with type OBO_REL:is_a
* Copied GO:0045449 to GO:0010556 with type OBO_REL:is_a
* Copied GO:0045941 to GO:0010557 with type OBO_REL:is_a
* Deleted GO:0051701 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051701 to GO:0044403 with type part_of
* Copied GO:0051701 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0051702 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051702 to GO:0044403 with type part_of
* Copied GO:0051702 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0051708 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051708 to GO:0044403 with type part_of
* Copied GO:0051708 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0051816 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051816 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0051816 to GO:0044403 with type part_of
* Deleted GO:0051817 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051817 to GO:0044403 with type part_of
* Copied GO:0051817 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0051821 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051821 to GO:0044403 with type part_of
* Copied GO:0051821 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0051824 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051824 to GO:0044403 with type part_of
* Copied GO:0051824 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0051825 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051825 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0051825 to GO:0044403 with type part_of
* Deleted GO:0051836 --OBO_REL:is_a--> GO:0044403
* Copied GO:0051836 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0051836 to GO:0044403 with type part_of
* Deleted GO:0052047 --OBO_REL:is_a--> GO:0044403
* Copied GO:0052047 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0052047 to GO:0044403 with type part_of
* Deleted GO:0052108 --OBO_REL:is_a--> GO:0051701
* Copied GO:0052108 to GO:0051701 with type part_of
* Deleted GO:0052171 --OBO_REL:is_a--> GO:0044403
* Copied GO:0052171 to GO:0044403 with type part_of
* Copied GO:0052171 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0052173 --OBO_REL:is_a--> GO:0044403
* Copied GO:0052173 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0052173 to GO:0044403 with type part_of
* Deleted GO:0052192 --OBO_REL:is_a--> GO:0044403
* Copied GO:0052192 to GO:0044403 with type part_of
* Copied GO:0052192 to GO:0044419 with type OBO_REL:is_a
* Deleted GO:0055117 --OBO_REL:is_a--> GO:0006937
* Copied GO:0055117 to GO:0006942 with type OBO_REL:is_a
* Deleted GO:0055118 --OBO_REL:is_a--> GO:0055117
* Copied GO:0055118 to GO:0045988 with type OBO_REL:is_a
* Copied GO:0060211 to GO:0031329 with type OBO_REL:is_a
* Copied GO:0060212 to GO:0031330 with type OBO_REL:is_a
* Copied GO:0060213 to GO:0031331 with type OBO_REL:is_a

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