[Go-diff] GO update 03/07/2008

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Fri Mar 7 21:30:45 PST 2008 

OBODIFF of gene_ontology_edit.obo version 5.724 by 5.726

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0010562
* Created object of type obo:TERM with id GO:0010563
* Created object of type obo:TERM with id GO:0010564
* Created object of type obo:TERM with id GO:0010565
* Created object of type obo:TERM with id GO:0010566
* Created object of type obo:TERM with id GO:0010567
* Created object of type obo:TERM with id GO:0034293
* Created object of type obo:TERM with id GO:0034294
* Created object of type obo:TERM with id GO:0034295
* Created object of type obo:TERM with id GO:0034296
* Created object of type obo:TERM with id GO:0034297
* Created object of type obo:TERM with id GO:0034298
* Created object of type obo:TERM with id GO:0034299
* Created object of type obo:TERM with id GO:0034300
* Created object of type obo:TERM with id GO:0034301
* Created object of type obo:TERM with id GO:0034302
* Created object of type obo:TERM with id GO:0034303
* Created object of type obo:TERM with id GO:0034304
* Created object of type obo:TERM with id GO:0034305
* Created object of type obo:TERM with id GO:0034306
* Created object of type obo:TERM with id GO:0034307
* Created object of type obo:TERM with id GO:0034308
* Created object of type obo:TERM with id GO:0034309
* Created object of type obo:TERM with id GO:0034310
* Created object of type obo:TERM with id GO:0034311
* Created object of type obo:TERM with id GO:0034312
* Created object of type obo:TERM with id GO:0034313
* Populated new object GO:0010562 (macro)
  * Changed name of GO:0010562 from "<new term>" to "positive regulation of phosphorus metabolic process"
  * Set definition of GO:0010562 to "Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving phosphorus or compounds containing phosphorus."
  * Added definition dbxref GOC:dph to GO:0010562
  * Added definition dbxref GOC:tb to GO:0010562
  * Copied GO:0010562 to GO:0051174 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010562
* Populated new object GO:0010563 (macro)
  * Changed name of GO:0010563 from "<new term>" to "negative regulation of phosphorus metabolic process"
  * Set definition of GO:0010563 to "Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving phosphorus or compounds containing phosphorus."
  * Added definition dbxref GOC:dph to GO:0010563
  * Added definition dbxref GOC:tb to GO:0010563
  * Copied GO:0010563 to GO:0051174 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010563
* Populated new object GO:0010564 (macro)
  * Changed name of GO:0010564 from "<new term>" to "regulation of cell cycle process"
  * Set definition of GO:0010564 to "Any process that modulates a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events."
  * Added definition dbxref GOC:dph to GO:0010564
  * Added definition dbxref GOC:tb to GO:0010564
  * Copied GO:0010564 to GO:0050794 with type OBO_REL:is_a
  * Copied GO:0010564 to GO:0022402 with type part_of
  * Assigned namespace "biological_process" to GO:0010564
* Populated new object GO:0010565 (macro)
  * Changed name of GO:0010565 from "<new term>" to "regulation of ketone metabolic process"
  * Set definition of GO:0010565 to "Any process that modulates the chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups."
  * Added definition dbxref GOC:dph to GO:0010565
  * Added definition dbxref GOC:tb to GO:0010565
  * Copied GO:0010565 to GO:0031323 with type OBO_REL:is_a
  * Copied GO:0010565 to GO:0042180 with type part_of
  * Assigned namespace "biological_process" to GO:0010565
* Populated new object GO:0010566 (macro)
  * Changed name of GO:0010566 from "<new term>" to "regulation of ketone biosynthetic process"
  * Set definition of GO:0010566 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a ketone, carried out by individual cells."
  * Added definition dbxref GOC:dph to GO:0010566
  * Added definition dbxref GOC:tb to GO:0010566
  * Copied GO:0010566 to GO:0010565 with type OBO_REL:is_a
  * Copied GO:0010566 to GO:0031326 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010566
* Populated new object GO:0010567 (macro)
  * Changed name of GO:0010567 from "<new term>" to "regulation of ketone catabolic process"
  * Set definition of GO:0010567 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a ketone, carried out by individual cells."
  * Added definition dbxref GOC:dph to GO:0010567
  * Added definition dbxref GOC:tb to GO:0010567
  * Copied GO:0010567 to GO:0031329 with type OBO_REL:is_a
  * Copied GO:0010567 to GO:0010565 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010567
* Populated new object GO:0034293 (macro)
  * Changed name of GO:0034293 from "<new term>" to "sexual sporulation"
  * Set definition of GO:0034293 to "The formation of spores derived from the products of meiosis."
  * Added definition dbxref GOC:mah to GO:0034293
  * Added synonym "meiotic spore formation" to GO:0034293
  * Changed synonym scope of GO:0034293 from "Related" to "Exact"
  * Added synonym "meiotic sporulation" to GO:0034293
  * Changed synonym scope of GO:0034293 from "Related" to "Exact"
  * Added synonym "sexual spore formation" to GO:0034293
  * Changed synonym scope of GO:0034293 from "Related" to "Exact"
  * Copied GO:0034293 to GO:0030435 with type OBO_REL:is_a
  * Copied GO:0034293 to GO:0048610 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034293
* Populated new object GO:0034294 (macro)
  * Changed name of GO:0034294 from "<new term>" to "sexual spore wall assembly"
  * Set definition of GO:0034294 to "The chemical reactions and pathways resulting in the formation of the specialized envelope lying outside the cell membrane of a spore derived from a product of meiosis."
  * Added definition dbxref GOC:mah to GO:0034294
  * Added GO:0034294 to category gosubset_prok
  * Added synonym "sexual spore wall formation" to GO:0034294
  * Changed synonym scope of GO:0034294 from "Related" to "Exact"
  * Copied GO:0034294 to GO:0030436 with type part_of
  * Copied GO:0034294 to GO:0042244 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034294
* Populated new object GO:0034295 (macro)
  * Changed name of GO:0034295 from "<new term>" to "basidiospore formation"
  * Set definition of GO:0034295 to "The process by which spores form outside a specialized end cell known as a basidium. Basidia are characteristic of the basidiomycete fungi (phylum Basidiomycota), and give rise to spores that each contain a haploid nucleus that is the product of meiosis. The spores are usually attached to the basidium by short spikes called sterigmata (singular: sterigma). In most basidiomycetes there are four sterigmata (and four spores) to a basidium."
  * Added definition dbxref GOC:ds to GO:0034295
  * Added definition dbxref GOC:mah to GO:0034295
  * Added definition dbxref http://www.gsbs.utmb.edu/microbook/ch073.htm to GO:0034295
  * Added definition dbxref http://www.ilmyco.gen.chicago.il.us/Terms/basid133.html to GO:0034295
  * Copied GO:0034295 to GO:0034293 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034295
* Populated new object GO:0034296 (macro)
  * Changed name of GO:0034296 from "<new term>" to "zygospore formation"
  * Set definition of GO:0034296 to "The process by which zygospores are formed. Zygospores are characteristic of the zygomycete fungi (phylum Zygomycota) thick-walled and darkly colored, and usually heavily ornamented as well, with many spines or ridges. It is formed between two specialized organs called suspensors, which are themselves usually heavily ornamented, one from each mating partner. The zygospore forms between them and then breaks away."
  * Added definition dbxref GOC:ds to GO:0034296
  * Added definition dbxref GOC:mah to GO:0034296
  * Added definition dbxref http://www.ilmyco.gen.chicago.il.us/Terms/zygos581.html to GO:0034296
  * Copied GO:0034296 to GO:0034293 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034296
* Populated new object GO:0034297 (macro)
  * Changed name of GO:0034297 from "<new term>" to "oidium formation"
  * Set definition of GO:0034297 to "The process by which oidia, a type of asexual spore found in fungi, are formed. Oidia are borne a few at a time on very simple hyphae that protrude a short distance into the substrate, and are usually presumed not to constitute the main reproductive strategy of the fungus."
  * Added definition dbxref GOC:mah to GO:0034297
  * Added definition dbxref http://www.ilmyco.gen.chicago.il.us/Terms/oidiu163.html to GO:0034297
  * Copied GO:0034297 to GO:0030436 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034297
* Populated new object GO:0034298 (macro)
  * Changed name of GO:0034298 from "<new term>" to "arthrospore formation"
  * Set definition of GO:0034298 to "The formation of conidia by the conversion of a pre-existing hypha. An arthrospore is produced by the last cell on a hypha breaking off and dispersing. Usually the walls thicken and the cell(s) separates before swelling of each spore. Sometimes further septa form in each cell prior to disarticulation."
  * Added definition dbxref GOC:mah to GO:0034298
  * Added definition dbxref http://bugs.bio.usyd.edu.au/Mycology/Glossary/glossary_a_b.shtml#arthrospore to GO:0034298
  * Added definition dbxref http://www.ilmyco.gen.chicago.il.us/Terms/arthr620.html to GO:0034298
  * Added synonym "arthroconidium formation" to GO:0034298
  * Added general dbxref http://medical.merriam-webster.com/medical/medical?book=Medical&va=arthroconidium to synonym arthroconidium formation of GO:0034298
  * Changed synonym scope of GO:0034298 from "Related" to "Exact"
  * Copied GO:0034298 to GO:0048315 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034298
* Populated new object GO:0034299 (macro)
  * Changed name of GO:0034299 from "<new term>" to "blastospore formation"
  * Set definition of GO:0034299 to "The formation of produced from a vegetative mother cell by budding. Blastospores are a type of asexual spore found in some fungi, including Candida species and the class Glomeromycota."
  * Added definition dbxref GOC:ds to GO:0034299
  * Added definition dbxref ISBN:?? to GO:0034299
  * Added synonym "blastoconidium formation" to GO:0034299
  * Added general dbxref http://cancerweb.ncl.ac.uk/cgi-bin/omd?Blastoconidium to synonym blastoconidium formation of GO:0034299
  * Changed synonym scope of GO:0034299 from "Related" to "Exact"
  * Copied GO:0034299 to GO:0048315 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034299
* Populated new object GO:0034300 (macro)
  * Changed name of GO:0034300 from "<new term>" to "sporangiospore formation"
  * Set definition of GO:0034300 to "The process by which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm"
  * Added definition dbxref GO:ds to GO:0034300
  * Added definition dbxref GOC:mah to GO:0034300
  * Added definition dbxref http://bugs.bio.usyd.edu.au/Mycology/Glossary/glossary_n_z.shtml to GO:0034300
  * Copied GO:0034300 to GO:0030436 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034300
* Populated new object GO:0034301 (macro)
  * Changed name of GO:0034301 from "<new term>" to "endospore formation"
  * Set definition of GO:0034301 to "The process by which a cell gives rise to an endospore, a dormant, highly resistant spore with a thick wall that forms within the mother cell. Endospores are produced by some low G+C Gram-positive bacteria in response to harsh conditions."
  * Added definition dbxref GOC:ds to GO:0034301
  * Added definition dbxref GOC:mah to GO:0034301
  * Added definition dbxref http://howie.myweb.uga.edu/introduction.html to GO:0034301
  * Copied GO:0034301 to GO:0030436 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034301
* Populated new object GO:0034302 (macro)
  * Changed name of GO:0034302 from "<new term>" to "akinete formation"
  * Set definition of GO:0034302 to "The process by which an akinete, a thick-walled (encysted) dormant cell derived from the enlargement of a vegetative cell, is formed. Akinetes typically have granular cytoplasm, are more resistant to environmental extremes than vegetative cells, and are characteristic of several groups of Cyanobacteria."
  * Added definition dbxref GOC:ds to GO:0034302
  * Added definition dbxref GOC:mah to GO:0034302
  * Added definition dbxref http://www.msu.edu/course/bot/423/algalglossary.htm#Reproductive to GO:0034302
  * Added definition dbxref PMID:11948167 to GO:0034302
  * Copied GO:0034302 to GO:0030436 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034302
* Populated new object GO:0034303 (macro)
  * Changed name of GO:0034303 from "<new term>" to "myxospore formation"
  * Set definition of GO:0034303 to "The process by which differentiated, resting cells are formed, usually within a fruiting body by Myxobacteria. The myxospore is more resistant to high temperature, dessication, and UV than vegetative myxobacteria."
  * Added definition dbxref GOC:ds to GO:0034303
  * Added definition dbxref ISBN:0122268008 to GO:0034303
  * Copied GO:0034303 to GO:0030436 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034303
* Populated new object GO:0034304 (macro)
  * Changed name of GO:0034304 from "<new term>" to "actinomycete-type spore formation"
  * Set definition of GO:0034304 to "The process by which differentiated, resting cells are formed from a substrate mycelium; characteristic of many members of the order Actinomycetales."
  * Added definition dbxref GOC:ds to GO:0034304
  * Added definition dbxref ISBN:0122268008 to GO:0034304
  * Copied GO:0034304 to GO:0030436 with type OBO_REL:is_a
  * Copied GO:0034304 to GO:0022413 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034304
* Populated new object GO:0034305 (macro)
  * Changed name of GO:0034305 from "<new term>" to "regulation of asexual sporulation"
  * Set definition of GO:0034305 to "Any process that modulates the frequency, rate or extent of spore formation from the products of mitosis."
  * Added definition dbxref GOC:mah to GO:0034305
  * Added synonym "regulation of asexual spore formation" to GO:0034305
  * Changed synonym scope of GO:0034305 from "Related" to "Exact"
  * Added synonym "regulation of mitotic spore formation" to GO:0034305
  * Changed synonym scope of GO:0034305 from "Related" to "Exact"
  * Added synonym "regulation of mitotic sporulation" to GO:0034305
  * Changed synonym scope of GO:0034305 from "Related" to "Exact"
  * Copied GO:0034305 to GO:0042173 with type OBO_REL:is_a
  * Copied GO:0034305 to GO:0030436 with type part_of
  * Assigned namespace "biological_process" to GO:0034305
* Populated new object GO:0034306 (macro)
  * Changed name of GO:0034306 from "<new term>" to "regulation of sexual sporulation"
  * Set definition of GO:0034306 to "Any process that modulates the frequency, rate or extent of spore formation from the products of meiosis."
  * Added definition dbxref GOC:mah to GO:0034306
  * Added synonym "MAPKKK cascade during sporulation (sensu Fungi)" to GO:0034306
  * Changed synonym scope of GO:0034306 from "Related" to "Narrow"
  * Added synonym "regulation of meiotic spore formation" to GO:0034306
  * Changed synonym scope of GO:0034306 from "Related" to "Exact"
  * Added synonym "regulation of meiotic sporulation" to GO:0034306
  * Changed synonym scope of GO:0034306 from "Related" to "Exact"
  * Added synonym "regulation of sexual spore formation" to GO:0034306
  * Changed synonym scope of GO:0034306 from "Related" to "Exact"
  * Copied GO:0034306 to GO:0034293 with type part_of
  * Copied GO:0034306 to GO:0042173 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034306
* Populated new object GO:0034307 (macro)
  * Changed name of GO:0034307 from "<new term>" to "regulation of ascospore formation"
  * Set definition of GO:0034307 to "Any process that modulates the frequency, rate or extent of ascospore formation."
  * Added definition dbxref GOC:mah to GO:0034307
  * Added synonym "MAPKKK cascade during sporulation (sensu Saccharomyces)" to GO:0034307
  * Changed synonym scope of GO:0034307 from "Related" to "Narrow"
  * Copied GO:0034307 to GO:0034306 with type OBO_REL:is_a
  * Copied GO:0034307 to GO:0030437 with type part_of
  * Assigned namespace "biological_process" to GO:0034307
* Populated new object GO:0034308 (macro)
  * Changed name of GO:0034308 from "<new term>" to "monohydric alcohol metabolic process"
  * Set definition of GO:0034308 to "The chemical reactions and pathways involving alcohols, any of a class of compounds containing one hydroxyl group attached to a saturated carbon atom."
  * Added definition dbxref ChEBI:30879 to GO:0034308
  * Added definition dbxref GOC:mah to GO:0034308
  * Added synonym "monohydric alcohol metabolism" to GO:0034308
  * Changed synonym scope of GO:0034308 from "Related" to "Exact"
  * Copied GO:0034308 to GO:0006066 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034308
* Populated new object GO:0034309 (macro)
  * Changed name of GO:0034309 from "<new term>" to "monohydric alcohol biosynthetic process"
  * Set definition of GO:0034309 to "The chemical reactions and pathways resulting in the formation of monohydric alcohols, any of a class of alkyl compounds containing a single hydroxyl group."
  * Added definition dbxref ChEBI:30879 to GO:0034309
  * Added definition dbxref GOC:mah to GO:0034309
  * Added GO:0034309 to category gosubset_prok
  * Added synonym "monohydric alcohol anabolism" to GO:0034309
  * Changed synonym scope of GO:0034309 from "Related" to "Exact"
  * Added synonym "monohydric alcohol biosynthesis" to GO:0034309
  * Changed synonym scope of GO:0034309 from "Related" to "Exact"
  * Added synonym "monohydric alcohol formation" to GO:0034309
  * Changed synonym scope of GO:0034309 from "Related" to "Exact"
  * Added synonym "monohydric alcohol synthesis" to GO:0034309
  * Changed synonym scope of GO:0034309 from "Related" to "Exact"
  * Copied GO:0034309 to GO:0046165 with type OBO_REL:is_a
  * Copied GO:0034309 to GO:0034308 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034309
* Populated new object GO:0034310 (macro)
  * Changed name of GO:0034310 from "<new term>" to "monohydric alcohol catabolic process"
  * Set definition of GO:0034310 to "The chemical reactions and pathways resulting in the breakdown of monohydric alcohols, any of a class of compounds containing a single hydroxyl group attached to a saturated carbon atom."
  * Added definition dbxref ChEBI:30879 to GO:0034310
  * Added definition dbxref GOC:mah to GO:0034310
  * Added GO:0034310 to category gosubset_prok
  * Added synonym "monohydric alcohol breakdown" to GO:0034310
  * Changed synonym scope of GO:0034310 from "Related" to "Exact"
  * Added synonym "monohydric alcohol catabolism" to GO:0034310
  * Changed synonym scope of GO:0034310 from "Related" to "Exact"
  * Added synonym "monohydric alcohol degradation" to GO:0034310
  * Changed synonym scope of GO:0034310 from "Related" to "Exact"
  * Copied GO:0034310 to GO:0034308 with type OBO_REL:is_a
  * Copied GO:0034310 to GO:0046164 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034310
* Populated new object GO:0034311 (macro)
  * Changed name of GO:0034311 from "<new term>" to "diol metabolic process"
  * Set definition of GO:0034311 to "The chemical reactions and pathways involving a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms."
  * Added definition dbxref ChEBI:23824 to GO:0034311
  * Added definition dbxref GOC:mah to GO:0034311
  * Added synonym "dihydric alcohol metabolic process" to GO:0034311
  * Changed synonym scope of GO:0034311 from "Related" to "Exact"
  * Added synonym "diol metabolism" to GO:0034311
  * Changed synonym scope of GO:0034311 from "Related" to "Exact"
  * Copied GO:0034311 to GO:0006066 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034311
* Populated new object GO:0034312 (macro)
  * Changed name of GO:0034312 from "<new term>" to "diol biosynthetic process"
  * Set definition of GO:0034312 to "The chemical reactions and pathways resulting in the formation of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms."
  * Added definition dbxref ChEBI:23824 to GO:0034312
  * Added definition dbxref GOC:mah to GO:0034312
  * Added synonym "dihydric alcohol biosynthetic process" to GO:0034312
  * Changed synonym scope of GO:0034312 from "Related" to "Exact"
  * Added synonym "diol anabolism" to GO:0034312
  * Changed synonym scope of GO:0034312 from "Related" to "Exact"
  * Added synonym "diol biosynthesis" to GO:0034312
  * Changed synonym scope of GO:0034312 from "Related" to "Exact"
  * Added synonym "diol formation" to GO:0034312
  * Changed synonym scope of GO:0034312 from "Related" to "Exact"
  * Added synonym "diol synthesis" to GO:0034312
  * Changed synonym scope of GO:0034312 from "Related" to "Exact"
  * Copied GO:0034312 to GO:0046165 with type OBO_REL:is_a
  * Copied GO:0034312 to GO:0034311 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034312
* Populated new object GO:0034313 (macro)
  * Changed name of GO:0034313 from "<new term>" to "diol catabolic process"
  * Set definition of GO:0034313 to "The chemical reactions and pathways resulting in the breakdown of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms."
  * Added definition dbxref ChEBI:23824 to GO:0034313
  * Added definition dbxref GOC:mah to GO:0034313
  * Added synonym "dihydric alcohol catabolic process" to GO:0034313
  * Changed synonym scope of GO:0034313 from "Related" to "Exact"
  * Added synonym "diol breakdown" to GO:0034313
  * Changed synonym scope of GO:0034313 from "Related" to "Exact"
  * Added synonym "diol catabolism" to GO:0034313
  * Changed synonym scope of GO:0034313 from "Related" to "Exact"
  * Added synonym "diol degradation" to GO:0034313
  * Changed synonym scope of GO:0034313 from "Related" to "Exact"
  * Copied GO:0034313 to GO:0046164 with type OBO_REL:is_a
  * Copied GO:0034313 to GO:0034311 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034313
* Deleted GO:0001100 --OBO_REL:is_a--> GO:0048523
* Copied GO:0001100 to GO:0045839 with type OBO_REL:is_a
* Deleted GO:0001953 --OBO_REL:is_a--> GO:0022408
* Copied GO:0001953 to GO:0007162 with type OBO_REL:is_a
* Deleted GO:0002682 --OBO_REL:is_a--> GO:0051239
* Copied GO:0002682 to GO:0050789 with type OBO_REL:is_a
* Deleted GO:0002683 --OBO_REL:is_a--> GO:0051241
* Copied GO:0002683 to GO:0048519 with type OBO_REL:is_a
* Deleted GO:0002684 --OBO_REL:is_a--> GO:0051240
* Copied GO:0002684 to GO:0048518 with type OBO_REL:is_a
* Changed definition of GO:0006066 from "The chemical reactions and pathways involving alcohols, any of a class of alkyl compounds containing a hydroxyl group." to "The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom."
* Added definition dbxref ChEBI:30879 to GO:0006066
* Deleted GO:0006067 --OBO_REL:is_a--> GO:0006066
* Copied GO:0006067 to GO:0034308 with type OBO_REL:is_a
* Deleted GO:0006068 --OBO_REL:is_a--> GO:0046164
* Copied GO:0006068 to GO:0034310 with type OBO_REL:is_a
* Deleted GO:0006070 --OBO_REL:is_a--> GO:0006066
* Copied GO:0006070 to GO:0034308 with type OBO_REL:is_a
* Deleted GO:0006115 --OBO_REL:is_a--> GO:0046165
* Copied GO:0006115 to GO:0034309 with type OBO_REL:is_a
* Deleted GO:0006715 --OBO_REL:is_a--> GO:0046165
* Copied GO:0006715 to GO:0034309 with type OBO_REL:is_a
* Deleted GO:0006795 --OBO_REL:is_a--> GO:0019220
* Copied GO:0006795 to GO:0051174 with type OBO_REL:is_a
* Copied GO:0007063 to GO:0010564 with type OBO_REL:is_a
* Copied GO:0007088 to GO:0010564 with type OBO_REL:is_a
* Copied GO:0007096 to GO:0010564 with type OBO_REL:is_a
* Deleted GO:0007116 --OBO_REL:is_a--> GO:0050793
* Copied GO:0007553 to GO:0010565 with type OBO_REL:is_a
* Copied GO:0007554 to GO:0010566 with type OBO_REL:is_a
* Deleted GO:0008634 --OBO_REL:is_a--> GO:0048519
* Copied GO:0010389 to GO:0010564 with type OBO_REL:is_a
* Copied GO:0010504 to GO:0010564 with type OBO_REL:is_a
* Copied GO:0010520 to GO:0010564 with type OBO_REL:is_a
* Deleted GO:0015945 --OBO_REL:is_a--> GO:0006066
* Copied GO:0015945 to GO:0034308 with type OBO_REL:is_a
* Deleted GO:0016487 --OBO_REL:is_a--> GO:0006066
* Copied GO:0016487 to GO:0034308 with type OBO_REL:is_a
* Deleted GO:0016488 --OBO_REL:is_a--> GO:0046164
* Copied GO:0016488 to GO:0034310 with type OBO_REL:is_a
* Changed definition of GO:0019751 from "The chemical reactions and pathways involving a polyol, any polyhydric alcohol." to "The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms."
* Deleted definition dbxref Oxford Dictionary of Biochemistry and Molecular Biology (ISBN:0198506732) from GO:0019751
* Added definition dbxref ChEBI:26191 to GO:0019751
* Added synonym "polyhydric alcohol metabolic process" to GO:0019751
* Changed synonym scope of GO:0019751 from "Related" to "Exact"
* Copied GO:0030071 to GO:0010564 with type OBO_REL:is_a
* Changed definition of GO:0030435 from "The formation of spores." to "The process by which a relatively unspecialized cell acquires the specialized features of a spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction. Spores are usually unicellular and may develop into vegetative organisms or gametes. They may be produced asexually or sexually and are of many types."
* Deleted definition dbxref Oxford Dictionary of Biochemistry and Molecular Biology (ISBN:0198506732) from GO:0030435
* Added definition dbxref GOC:mah to GO:0030435
* Added definition dbxref ISBN:0072992913 to GO:0030435
* Changed name of GO:0030436 from "sporulation (sensu Bacteria)" to "asexual sporulation"
* Changed definition of GO:0030436 from "The formation of spores as in, but not restricted to, the Bacteria (Bacteria, ncbi_taxonomy_id:2)." to "The formation of spores derived from the products of mitosis."
* Added definition dbxref PMID:9529886 to GO:0030436
* Changed synonym scope of GO:0030436 from "Exact" to "Narrow"
* Added synonym "asexual spore formation" to GO:0030436
* Changed synonym scope of GO:0030436 from "Related" to "Exact"
* Added synonym "mitotic spore formation" to GO:0030436
* Changed synonym scope of GO:0030436 from "Related" to "Exact"
* Added synonym "mitotic sporulation" to GO:0030436
* Changed synonym scope of GO:0030436 from "Related" to "Exact"
* Added synonym "sporulation (sensu Bacteria)" to GO:0030436
* Changed synonym scope of GO:0030436 from "Related" to "Narrow"
* Changed name of GO:0030437 from "sporulation (sensu Fungi)" to "ascospore formation"
* Changed definition of GO:0030437 from "The formation of spores as in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751)." to "The process by which a diploid cell undergoes meiosis, and the meiotic products acquire the specialized features of ascospores. Ascospores are generally found in clusters of four or eight spores within a single mother cell, the ascus, and are characteristic of the ascomycete fungi (phylum Ascomycota)."
* Added definition dbxref PMID:16339736 to GO:0030437
* Deleted synonym "ascospore formation" from GO:0030437
* Changed synonym scope of GO:0030437 from "Exact" to "Broad"
* Added synonym "sporulation (sensu Fungi)" to GO:0030437
* Changed synonym scope of GO:0030437 from "Related" to "Broad"
* Deleted GO:0030437 --OBO_REL:is_a--> GO:0048622
* Copied GO:0030437 to GO:0034293 with type OBO_REL:is_a
* Changed name of GO:0030476 from "fungal-type spore wall assembly" to "ascospore wall assembly"
* Changed definition of GO:0030476 from "Process by which the spore nucleus becomes surrounded by a specialized spore wall. Occurs by deposition of spore wall components in the lumenal space between the outer and inner leaflets of the prospore membrane." to "The process by which the ascospore nucleus becomes surrounded by a specialized spore wall. Occurs by deposition of spore wall components in the lumenal space between the outer and inner leaflets of the prospore membrane."
* Changed name of GO:0031321 from "prospore formation" to "ascospore-type prospore formation"
* Changed definition of GO:0031321 from "During fungal sporulation, the process by which each haploid nucleus becomes encapsulated by a double membrane." to "During ascospore formation, the process by which each haploid nucleus becomes encapsulated by a double membrane."
* Changed name of GO:0031322 from "prospore-specific spindle pole body modification" to "ascospore-type prospore-specific spindle pole body modification"
* Changed definition of GO:0031322 from "Structural modification of the spindle pole body that takes place during the second meiotic division; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP)." to "Structural modification of the spindle pole body that takes place during the second meiotic division during ascospore formation; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP)."
* Deleted GO:0031536 --OBO_REL:is_a--> GO:0048522
* Copied GO:0031536 to GO:0045840 with type OBO_REL:is_a
* Changed name of GO:0032120 from "prospore membrane formation" to "ascospore-type prospore membrane formation"
* Copied GO:0032887 to GO:0010564 with type OBO_REL:is_a
* Deleted GO:0033020 --OBO_REL:is_a--> GO:0006066
* Copied GO:0033020 to GO:0034308 with type OBO_REL:is_a
* Deleted GO:0033021 --OBO_REL:is_a--> GO:0046165
* Copied GO:0033021 to GO:0034309 with type OBO_REL:is_a
* Deleted GO:0033022 --OBO_REL:is_a--> GO:0046164
* Copied GO:0033022 to GO:0034310 with type OBO_REL:is_a
* Copied GO:0033045 to GO:0010564 with type OBO_REL:is_a
* Copied GO:0033261 to GO:0010564 with type OBO_REL:is_a
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"
* Deleted GO:0034077 --OBO_REL:is_a--> GO:0019751
* Copied GO:0034077 to GO:0034311 with type OBO_REL:is_a
* Deleted GO:0034078 --OBO_REL:is_a--> GO:0046174
* Copied GO:0034078 to GO:0034313 with type OBO_REL:is_a
* Deleted GO:0034079 --OBO_REL:is_a--> GO:0046173
* Copied GO:0034079 to GO:0034312 with type OBO_REL:is_a
* Copied GO:0034091 to GO:0010564 with type OBO_REL:is_a
* Changed name of GO:0034217 from "spore wall chitin biosynthetic process" to "ascospore wall chitin biosynthetic process"
* Changed definition of GO:0034217 from "The chemical reactions and pathways resulting in the formation of spore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of fungal-type spores." to "The chemical reactions and pathways resulting in the formation of ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores."
* Deleted synonym "spore wall chitin anabolism" from GO:0034217
* Deleted synonym "spore wall chitin biosynthesis" from GO:0034217
* Deleted synonym "spore wall chitin formation" from GO:0034217
* Deleted synonym "spore wall chitin synthesis" from GO:0034217
* Added synonym "ascospore wall chitin anabolism" to GO:0034217
* Changed synonym scope of GO:0034217 from "Related" to "Exact"
* Added synonym "ascospore wall chitin biosynthesis" to GO:0034217
* Changed synonym scope of GO:0034217 from "Related" to "Exact"
* Added synonym "ascospore wall chitin formation" to GO:0034217
* Changed synonym scope of GO:0034217 from "Related" to "Exact"
* Added synonym "ascospore wall chitin synthesis" to GO:0034217
* Changed synonym scope of GO:0034217 from "Related" to "Exact"
* Changed name of GO:0034218 from "spore wall chitin metabolic process" to "ascospore wall chitin metabolic process"
* Changed definition of GO:0034218 from "The chemical reactions and pathways involving spore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of fungal-type spores." to "The chemical reactions and pathways involving ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores."
* Deleted synonym "spore wall chitin metabolism" from GO:0034218
* Added synonym "ascospore wall chitin metabolism" to GO:0034218
* Changed synonym scope of GO:0034218 from "Related" to "Exact"
* Changed name of GO:0034223 from "regulation of spore wall chitin biosynthetic process" to "regulation of ascospore wall chitin biosynthetic process"
* Changed definition of GO:0034223 from "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of spore wall chitin." to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ascospore wall chitin."
* Deleted synonym "regulation of spore wall chitin anabolism" from GO:0034223
* Deleted synonym "regulation of spore wall chitin biosynthesis" from GO:0034223
* Deleted synonym "regulation of spore wall chitin formation" from GO:0034223
* Deleted synonym "regulation of spore wall chitin synthesis" from GO:0034223
* Added synonym "regulation of ascospore wall chitin anabolism" to GO:0034223
* Changed synonym scope of GO:0034223 from "Related" to "Exact"
* Added synonym "regulation of ascospore wall chitin biosynthesis" to GO:0034223
* Changed synonym scope of GO:0034223 from "Related" to "Exact"
* Added synonym "regulation of ascospore wall chitin formation" to GO:0034223
* Changed synonym scope of GO:0034223 from "Related" to "Exact"
* Added synonym "regulation of ascospore wall chitin synthesis" to GO:0034223
* Changed synonym scope of GO:0034223 from "Related" to "Exact"
* Changed name of GO:0034232 from "spore wall chitin catabolic process" to "ascospore wall chitin catabolic process"
* Changed definition of GO:0034232 from "The chemical reactions and pathways resulting in the breakdown of spore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of fungal-type spores." to "The chemical reactions and pathways resulting in the breakdown of ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores."
* Deleted synonym "spore wall chitin breakdown" from GO:0034232
* Deleted synonym "spore wall chitin catabolism" from GO:0034232
* Deleted synonym "spore wall chitin degradation" from GO:0034232
* Added synonym "ascospore wall chitin breakdown" to GO:0034232
* Changed synonym scope of GO:0034232 from "Related" to "Exact"
* Added synonym "ascospore wall chitin catabolism" to GO:0034232
* Changed synonym scope of GO:0034232 from "Related" to "Exact"
* Added synonym "ascospore wall chitin degradation" to GO:0034232
* Changed synonym scope of GO:0034232 from "Related" to "Exact"
* Changed name of GO:0034234 from "regulation of spore wall chitin catabolic process" to "regulation of ascospore wall chitin catabolic process"
* Changed definition of GO:0034234 from "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of spore wall chitin." to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of ascospore wall chitin."
* Deleted synonym "regulation of spore wall chitin breakdown" from GO:0034234
* Deleted synonym "regulation of spore wall chitin catabolism" from GO:0034234
* Deleted synonym "regulation of spore wall chitin degradation" from GO:0034234
* Added synonym "regulation of ascospore wall chitin breakdown" to GO:0034234
* Changed synonym scope of GO:0034234 from "Related" to "Exact"
* Added synonym "regulation of ascospore wall chitin catabolism" to GO:0034234
* Changed synonym scope of GO:0034234 from "Related" to "Exact"
* Added synonym "regulation of ascospore wall chitin degradation" to GO:0034234
* Changed synonym scope of GO:0034234 from "Related" to "Exact"
* Copied GO:0040020 to GO:0010564 with type OBO_REL:is_a
* Deleted synonym "MAPKKK cascade during sporulation (sensu Fungi)" from GO:0042173
* Deleted synonym "MAPKKK cascade during sporulation (sensu Saccharomyces)" from GO:0042173
* Changed name of GO:0042243 from "spore wall assembly (sensu Bacteria)" to "asexual spore wall assembly"
* Changed definition of GO:0042243 from "The chemical reactions and pathways resulting in the formation of the specialized envelope lying outside the cell membrane of a spore, as in, but not restricted to, the Bacteria (Bacteria, ncbi_taxonomy_id:2)." to "The chemical reactions and pathways resulting in the formation of the specialized envelope lying outside the cell membrane of a spore derived from a product of mitosis."
* Added synonym "asexual spore wall formation" to GO:0042243
* Changed synonym scope of GO:0042243 from "Related" to "Exact"
* Added synonym "spore wall assembly (sensu Bacteria)" to GO:0042243
* Changed synonym scope of GO:0042243 from "Related" to "Narrow"
* Deleted GO:0042243 --OBO_REL:is_a--> GO:0030436
* Copied GO:0042243 to GO:0030436 with type part_of
* Added synonym "spore wall formation" to GO:0042244
* Changed synonym scope of GO:0042244 from "Related" to "Exact"
* Changed name of GO:0042763 from "immature spore" to "intracellular immature spore"
* Changed name of GO:0042764 from "prospore" to "ascospore-type prospore"
* Changed definition of GO:0042764 from "An immature spore, of the type seen in some species of fungi and protist, undergoing development, usually consisting of nucleic acid, prospore membrane(s) that encase the nucleic acid, and ultimately a cell wall that covers the membrane(s)." to "An immature spore, of the type observed in ascopore-forming fungi, undergoing development; usually consists of nucleic acid, prospore membrane(s) that encase the nucleic acid, and ultimately a cell wall that covers the membrane(s)."
* Changed synonym scope of GO:0042764 from "Exact" to "Broad"
* Deleted GO:0042844 --OBO_REL:is_a--> GO:0006066
* Copied GO:0042844 to GO:0034311 with type OBO_REL:is_a
* Deleted GO:0042845 --OBO_REL:is_a--> GO:0046165
* Copied GO:0042845 to GO:0034312 with type OBO_REL:is_a
* Deleted GO:0042846 --OBO_REL:is_a--> GO:0046164
* Copied GO:0042846 to GO:0034313 with type OBO_REL:is_a
* Deleted GO:0042985 --OBO_REL:is_a--> GO:0009890
* Deleted GO:0042986 --OBO_REL:is_a--> GO:0009891
* Copied GO:0045456 to GO:0045455 with type OBO_REL:is_a
* Deleted GO:0045781 --OBO_REL:is_a--> GO:0051093
* Deleted GO:0045782 --OBO_REL:is_a--> GO:0051094
* Deleted GO:0045942 --OBO_REL:is_a--> GO:0045936
* Copied GO:0045942 to GO:0010563 with type OBO_REL:is_a
* Deleted GO:0045949 --OBO_REL:is_a--> GO:0045937
* Copied GO:0045949 to GO:0010562 with type OBO_REL:is_a
* Deleted GO:0046017 --part_of--> GO:0045896
* Copied GO:0046017 to GO:0045896 with type OBO_REL:is_a
* Deleted GO:0046021 --part_of--> GO:0045896
* Copied GO:0046021 to GO:0045896 with type OBO_REL:is_a
* Deleted GO:0046023 --part_of--> GO:0045896
* Copied GO:0046023 to GO:0045896 with type OBO_REL:is_a
* Changed definition of GO:0046164 from "The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of alkyl compounds containing a hydroxyl group." to "The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom."
* Added definition dbxref ChEBI:30879 to GO:0046164
* Changed definition of GO:0046165 from "The chemical reactions and pathways resulting in the formation of alcohols, any of a class of alkyl compounds containing a hydroxyl group." to "The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom."
* Added definition dbxref ChEBI:30879 to GO:0046165
* Deleted GO:0046169 --OBO_REL:is_a--> GO:0046165
* Copied GO:0046169 to GO:0034309 with type OBO_REL:is_a
* Deleted GO:0046170 --OBO_REL:is_a--> GO:0046164
* Copied GO:0046170 to GO:0034310 with type OBO_REL:is_a
* Deleted GO:0046171 --OBO_REL:is_a--> GO:0046165
* Copied GO:0046171 to GO:0034309 with type OBO_REL:is_a
* Deleted GO:0046172 --OBO_REL:is_a--> GO:0046164
* Copied GO:0046172 to GO:0034310 with type OBO_REL:is_a
* Changed definition of GO:0046173 from "The chemical reactions and pathways resulting in the formation of a polyol, any polyhydric alcohol." to "The chemical reactions and pathways resulting in the formation of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms."
* Deleted definition dbxref Oxford Dictionary of Biochemistry and Molecular Biology (ISBN:0198506732) from GO:0046173
* Added definition dbxref ChEBI:26191 to GO:0046173
* Added synonym "polyhydric alcohol biosynthetic process" to GO:0046173
* Changed synonym scope of GO:0046173 from "Related" to "Exact"
* Changed definition of GO:0046174 from "The chemical reactions and pathways resulting in the breakdown of a polyol, any polyhydric alcohol." to "The chemical reactions and pathways resulting in the breakdown of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms."
* Deleted definition dbxref Oxford Dictionary of Biochemistry and Molecular Biology (ISBN:0198506732) from GO:0046174
* Added definition dbxref ChEBI:26191 to GO:0046174
* Added synonym "polyhydric alcohol catabolic process" to GO:0046174
* Changed synonym scope of GO:0046174 from "Related" to "Exact"
* Copied GO:0046344 to GO:0045455 with type OBO_REL:is_a
* Deleted GO:0046454 --OBO_REL:is_a--> GO:0006066
* Copied GO:0046454 to GO:0034311 with type OBO_REL:is_a
* Copied GO:0046599 to GO:0010564 with type OBO_REL:is_a
* Copied GO:0046605 to GO:0010564 with type OBO_REL:is_a
* Deleted GO:0048315 --part_of--> GO:0030437
* Copied GO:0048315 to GO:0030436 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it was ambiguously defined and incorrectly placed in the ontology."
* Changed definition of GO:0048622 from "The formation of reproductive spores." to "OBSOLETE. The formation of reproductive spores."
* Deleted GO:0048622 --OBO_REL:is_a--> GO:0030435
* Deleted GO:0048622 --OBO_REL:is_a--> GO:0022413
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 1db2025
* Deleted GO:0051143 --OBO_REL:is_a--> GO:0019751
* Copied GO:0051143 to GO:0034311 with type OBO_REL:is_a
* Deleted GO:0051144 --OBO_REL:is_a--> GO:0046174
* Copied GO:0051144 to GO:0034313 with type OBO_REL:is_a

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