[Go-diff] GO update 03/13/2008

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Thu Mar 13 21:30:45 PDT 2008 

OBODIFF of gene_ontology_edit.obo version 5.732 by 5.733

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0034314
* Created object of type obo:TERM with id GO:0034315
* Created object of type obo:TERM with id GO:0034316
* Created object of type obo:TERM with id GO:0034317
* Created object of type obo:TERM with id GO:0034318
* Created object of type obo:TERM with id GO:0034319
* Created object of type obo:TERM with id GO:0034320
* Created object of type obo:TERM with id GO:0034321
* Created object of type obo:TERM with id GO:0034322
* Created object of type obo:TERM with id GO:0034323
* Created object of type obo:TERM with id GO:0034324
* Created object of type obo:TERM with id GO:0034325
* Created object of type obo:TERM with id GO:0034326
* Created object of type obo:TERM with id GO:0034327
* Created object of type obo:TERM with id GO:0034328
* Populated new object GO:0034314 (macro)
  * Changed name of GO:0034314 from "<new term>" to "Arp2/3 complex-mediated actin nucleation"
  * Set definition of GO:0034314 to "The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament, mediated by the Arp2/3 protein complex and its interaction with other proteins."
  * Added definition dbxref GOC:mah to GO:0034314
  * Added definition dbxref PMID:16959963 to GO:0034314
  * Copied GO:0034314 to GO:0045010 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034314
* Populated new object GO:0034315 (macro)
  * Changed name of GO:0034315 from "<new term>" to "regulation of Arp2/3 complex-mediated actin nucleation"
  * Set definition of GO:0034315 to "Any process that modulates the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins."
  * Added definition dbxref GOC:mah to GO:0034315
  * Copied GO:0034315 to GO:0034314 with type part_of
  * Copied GO:0034315 to GO:0051125 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034315
* Populated new object GO:0034316 (macro)
  * Changed name of GO:0034316 from "<new term>" to "negative regulation of Arp2/3 complex-mediated actin nucleation"
  * Set definition of GO:0034316 to "Any process that stops, prevents, or reduces the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins."
  * Added definition dbxref GOC:mah to GO:0034316
  * Added definition dbxref PMID:16959963 to GO:0034316
  * Copied GO:0034316 to GO:0051126 with type OBO_REL:is_a
  * Copied GO:0034316 to GO:0034315 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0034316
* Populated new object GO:0034317 (macro)
  * Changed name of GO:0034317 from "<new term>" to "nicotinic acid riboside kinase activity"
  * Set definition of GO:0034317 to "Catalysis of the reaction: ATP + nicotinic acid riboside (NaR) = ADP + nicotinic acid mononucleotide (NaMN)."
  * Added definition dbxref PMID:17914902 to GO:0034317
  * Copied GO:0034317 to GO:0019206 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034317
* Populated new object GO:0034318 (macro)
  * Changed name of GO:0034318 from "<new term>" to "alcohol O-acyltransferase activity"
  * Set definition of GO:0034318 to "Catalysis of the transfer of an acyl group to an oxygen atom on an alcohol acceptor molecule."
  * Added definition dbxref GOC:mah to GO:0034318
  * Added synonym "acyl-CoA:alcohol O-acyltransferase activity" to GO:0034318
  * Changed synonym scope of GO:0034318 from "Related" to "Exact"
  * Added synonym "acyl-CoA:ethanol O-acyltransferase" to GO:0034318
  * Changed synonym scope of GO:0034318 from "Related" to "Narrow"
  * Added synonym "acyl-coenzymeA:alcohol O-acyltransferase activity" to GO:0034318
  * Changed synonym scope of GO:0034318 from "Related" to "Exact"
  * Added synonym "acyl-coenzymeA:ethanol O-acyltransferase activity" to GO:0034318
  * Changed synonym scope of GO:0034318 from "Related" to "Narrow"
  * Added synonym "AEATase activity" to GO:0034318
  * Changed synonym scope of GO:0034318 from "Related" to "Narrow"
  * Added synonym "alcohol acyltransferase activity" to GO:0034318
  * Changed synonym scope of GO:0034318 from "Related" to "Exact"
  * Copied GO:0034318 to GO:0008374 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034318
* Populated new object GO:0034319 (macro)
  * Changed name of GO:0034319 from "<new term>" to "alcohol O-butanoyltransferase activity"
  * Set definition of GO:0034319 to "Catalysis of the reaction: butanoyl-CoA + an alcohol = CoA + a butyl ester."
  * Added definition dbxref GOC:mah to GO:0034319
  * Added definition dbxref PMID:16361250 to GO:0034319
  * Copied GO:0034319 to GO:0034323 with type OBO_REL:is_a
  * Copied GO:0034319 to GO:0034318 with type OBO_REL:is_a
  * Copied GO:0034319 to GO:0016413 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034319
* Populated new object GO:0034320 (macro)
  * Changed name of GO:0034320 from "<new term>" to "alcohol O-hexanoyltransferase activity"
  * Set definition of GO:0034320 to "Catalysis of the reaction: hexanoyl-CoA + an alcohol = CoA + a hexyl ester."
  * Added definition dbxref GOC:mah to GO:0034320
  * Added definition dbxref PMID:16361250 to GO:0034320
  * Copied GO:0034320 to GO:0016413 with type OBO_REL:is_a
  * Copied GO:0034320 to GO:0034324 with type OBO_REL:is_a
  * Copied GO:0034320 to GO:0034318 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034320
* Populated new object GO:0034321 (macro)
  * Changed name of GO:0034321 from "<new term>" to "alcohol O-octanoyltransferase activity"
  * Set definition of GO:0034321 to "Catalysis of the reaction: octanoyl-CoA + an alcohol = CoA + an octyl ester."
  * Added definition dbxref GOC:mah to GO:0034321
  * Added definition dbxref PMID:16361250 to GO:0034321
  * Copied GO:0034321 to GO:0016413 with type OBO_REL:is_a
  * Copied GO:0034321 to GO:0034318 with type OBO_REL:is_a
  * Copied GO:0034321 to GO:0016414 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034321
* Populated new object GO:0034322 (macro)
  * Changed name of GO:0034322 from "<new term>" to "alcohol O-decanoyltransferase activity"
  * Set definition of GO:0034322 to "Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester."
  * Added definition dbxref GOC:mah to GO:0034322
  * Added definition dbxref PMID:16361250 to GO:0034322
  * Copied GO:0034322 to GO:0034318 with type OBO_REL:is_a
  * Copied GO:0034322 to GO:0034325 with type OBO_REL:is_a
  * Copied GO:0034322 to GO:0016413 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034322
* Populated new object GO:0034323 (macro)
  * Changed name of GO:0034323 from "<new term>" to "O-butanoyltransferase activity"
  * Set definition of GO:0034323 to "Catalysis of the transfer of a butyl group to an oxygen atom on the acceptor molecule."
  * Added definition dbxref GOC:mah to GO:0034323
  * Copied GO:0034323 to GO:0034326 with type OBO_REL:is_a
  * Copied GO:0034323 to GO:0008374 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034323
* Populated new object GO:0034324 (macro)
  * Changed name of GO:0034324 from "<new term>" to "O-hexanoyltransferase activity"
  * Set definition of GO:0034324 to "Catalysis of the transfer of a hexyl group to an oxygen atom on the acceptor molecule."
  * Added definition dbxref GOC:mah to GO:0034324
  * Copied GO:0034324 to GO:0008374 with type OBO_REL:is_a
  * Copied GO:0034324 to GO:0034327 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034324
* Populated new object GO:0034325 (macro)
  * Changed name of GO:0034325 from "<new term>" to "O-decanoyltransferase activity"
  * Set definition of GO:0034325 to "Catalysis of the transfer of a decyl group to an oxygen atom on the acceptor molecule."
  * Added definition dbxref GOC:mah to GO:0034325
  * Copied GO:0034325 to GO:0034328 with type OBO_REL:is_a
  * Copied GO:0034325 to GO:0008374 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034325
* Populated new object GO:0034326 (macro)
  * Changed name of GO:0034326 from "<new term>" to "butanoyltransferase activity"
  * Set definition of GO:0034326 to "Catalysis of the transfer of a butanoyl (CH3-[CH2]2-CO-) group to an acceptor molecule."
  * Added definition dbxref GOC:mah to GO:0034326
  * Copied GO:0034326 to GO:0008415 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034326
* Populated new object GO:0034327 (macro)
  * Changed name of GO:0034327 from "<new term>" to "hexanoyltransferase activity"
  * Set definition of GO:0034327 to "Catalysis of the transfer of a hexanoyl (CH3-[CH2]4-CO-) group to an acceptor molecule."
  * Added definition dbxref GOC:mah to GO:0034327
  * Copied GO:0034327 to GO:0008415 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034327
* Populated new object GO:0034328 (macro)
  * Changed name of GO:0034328 from "<new term>" to "decanoyltransferase activity"
  * Set definition of GO:0034328 to "Catalysis of the transfer of a decanoyl (CH3-[CH2]8-CO-) group to an acceptor molecule."
  * Added definition dbxref GOC:mah to GO:0034328
  * Copied GO:0034328 to GO:0008415 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0034328
* Copied GO:0004026 to GO:0034318 with type OBO_REL:is_a
* Copied GO:0030117 to GO:0043234 with type OBO_REL:is_a
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"
* Removed comment
* Deleted synonym "R8 cell spacing in compound eye" from GO:0045469

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