[Go-diff] GO update 03/31/2008

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Mon Mar 31 21:30:45 PDT 2008


OBODIFF of gene_ontology_edit.obo version 5.747 by 5.748

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0055114
* Populated new object GO:0055114 (macro)
  * Changed name of GO:0055114 from "<new term>" to "oxidation reduction"
  * Set definition of GO:0055114 to "The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons."
  * Added definition dbxref GOC:dl to GO:0055114
  * Added definition dbxref GOC:ed to GO:0055114
  * Added definition dbxref GOC:jid to GO:0055114
  * Added definition dbxref GOC:jm to GO:0055114
  * Added definition dbxref GOC:mlg to GO:0055114
  * Added definition dbxref GOC:rh to GO:0055114
  * Added synonym "electron transport process" to GO:0055114
  * org.geneontology.oboedit.datamodel.history.ChangeSynCategoryHistoryItem at 6141c1
  * Changed synonym scope of GO:0055114 from "Related" to "Exact"
  * Added synonym "oxidoreductase process" to GO:0055114
  * org.geneontology.oboedit.datamodel.history.ChangeSynCategoryHistoryItem at 1241756
  * Changed synonym scope of GO:0055114 from "Related" to "Exact"
  * Copied GO:0055114 to GO:0008152 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0055114
* Deleted GO:0000335 --OBO_REL:is_a--> GO:0045910
* Deleted GO:0000336 --OBO_REL:is_a--> GO:0045911
* Deleted GO:0002652 --OBO_REL:is_a--> GO:0002819
* Copied GO:0006313 to GO:0006310 with type OBO_REL:is_a
* Deleted GO:0007096 --OBO_REL:is_a--> GO:0010564
* Deleted GO:0007587 --OBO_REL:is_a--> GO:0007586
* Copied GO:0007587 to GO:0005975 with type OBO_REL:is_a
* Copied GO:0007611 to GO:0032501 with type OBO_REL:is_a
* Copied GO:0007632 to GO:0032501 with type OBO_REL:is_a
* Deleted GO:0010467 --OBO_REL:is_a--> GO:0008150
* Copied GO:0010467 to GO:0009987 with type OBO_REL:is_a
* Deleted GO:0010468 --OBO_REL:is_a--> GO:0050789
* Copied GO:0010468 to GO:0050794 with type OBO_REL:is_a
* Deleted GO:0010503 --OBO_REL:is_a--> GO:0032108
* Deleted GO:0010520 --OBO_REL:is_a--> GO:0010564
* Deleted GO:0010535 --OBO_REL:is_a--> GO:0050731
* Added definition dbxref PMID:17511809 to GO:0015616
* Deleted GO:0019607 --OBO_REL:is_a--> GO:0042135
* Deleted GO:0019787 --OBO_REL:is_a--> GO:0003824
* Copied GO:0022900 to GO:0055114 with type OBO_REL:is_a
* Deleted GO:0030071 --OBO_REL:is_a--> GO:0010564
* Added definition dbxref GOC:dph to GO:0030534
* Added definition dbxref GOC:tb to GO:0030534
* Deleted GO:0032196 --OBO_REL:is_a--> GO:0006310
* Copied GO:0032196 to GO:0009987 with type OBO_REL:is_a
* Deleted GO:0032430 --OBO_REL:is_a--> GO:0060193
* Deleted GO:0032884 --OBO_REL:is_a--> GO:0051128
* Changed synonym scope of GO:0033920 from "Broad" to "Exact"
* Deleted GO:0034091 --OBO_REL:is_a--> GO:0010564
* Copied GO:0035187 to GO:0032501 with type OBO_REL:is_a
* Deleted GO:0042443 --OBO_REL:is_a--> GO:0042133
* Deleted GO:0042444 --OBO_REL:is_a--> GO:0042136
* Deleted GO:0043286 --OBO_REL:is_a--> GO:0009889
* Deleted GO:0045212 --OBO_REL:is_a--> GO:0009059
* Deleted GO:0045798 --OBO_REL:is_a--> GO:0051053
* Deleted GO:0045799 --OBO_REL:is_a--> GO:0051054
* Deleted GO:0045936 --OBO_REL:is_a--> GO:0031324
* Deleted GO:0045937 --OBO_REL:is_a--> GO:0031325
* Deleted GO:0046017 --OBO_REL:is_a--> GO:0022402
* Deleted GO:0046020 --OBO_REL:is_a--> GO:0000122
* Deleted GO:0046021 --OBO_REL:is_a--> GO:0022402
* Deleted GO:0046023 --OBO_REL:is_a--> GO:0022402
* Deleted GO:0046599 --OBO_REL:is_a--> GO:0010564
* Copied GO:0048266 to GO:0032501 with type OBO_REL:is_a


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