[Go-diff] GO update 05/21/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_write.obo version 1.69 by 1.70

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0043909
* Created object of type obo:TERM with id GO:0043910
* Created object of type obo:TERM with id GO:0043911
* Created object of type obo:TERM with id GO:0043912
* Populated new object GO:0043909 (macro)
  * Changed name of GO:0043909 from "<new term>" to "N-acetylcitrulline deacetylase activity"
  * Set definition of GO:0043909 to "Catalysis of the reaction: N-acetyl-L-citrulline + H2O => citrulline + acetate."
  * Added definition dbxref GOC:jl to GO:0043909
  * Added definition dbxref IMG:02799 to GO:0043909
  * Added definition dbxref PMID:16750290 to GO:0043909
  * Added general dbxref EC:3.5.1.- to GO:0043909
  * Added general dbxref IMG:02799 to GO:0043909
  * Added GO:0043909 to category gosubset_prok
  * Added synonym "acetylcitrulline deacetylase activity" to GO:0043909
  * Changed synonym scope of GO:0043909 from "Related" to "Exact"
  * Added synonym "N-acetyl-L-citrulline deacetylase activity" to GO:0043909
  * Changed synonym scope of GO:0043909 from "Related" to "Exact"
  * Copied GO:0043909 to GO:0016811 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0043909
* Populated new object GO:0043910 (macro)
  * Changed name of GO:0043910 from "<new term>" to "coenzyme F390 synthetase activity"
  * Set definition of GO:0043910 to "Catalysis of the reaction: coenzyme F420 + ATP = coenzyme F390."
  * Added definition dbxref GOC:jl to GO:0043910
  * Added definition dbxref IMG:02803 to GO:0043910
  * Added definition dbxref PMID:7957247 to GO:0043910
  * Added definition dbxref PMID:8550473 to GO:0043910
  * Added general dbxref EC:2.7.7.- to GO:0043910
  * Added general dbxref IMG:02803 to GO:0043910
  * Added GO:0043910 to category gosubset_prok
  * Added synonym "ATP:coenzyme F420 adenyltransferase activity" to GO:0043910
  * Changed synonym scope of GO:0043910 from "Related" to "Exact"
  * Copied GO:0043910 to GO:0016779 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0043910
* Populated new object GO:0043911 (macro)
  * Changed name of GO:0043911 from "<new term>" to "D-lysine transaminase activity"
  * Set definition of GO:0043911 to "Catalysis of the reaction: D-lysine + 2-oxoglutarate = L-glutamate + 6-amino-2-oxohexanoate."
  * Added definition dbxref GOC:jl to GO:0043911
  * Added definition dbxref IMG:02956 to GO:0043911
  * Added definition dbxref PMID:17259313 to GO:0043911
  * Added general dbxref EC:2.6.1.- to GO:0043911
  * Added general dbxref IMG:02956 to GO:0043911
  * Added GO:0043911 to category gosubset_prok
  * Added synonym "D-lysine aminotransferase activity" to GO:0043911
  * Changed synonym scope of GO:0043911 from "Related" to "Exact"
  * Copied GO:0043911 to GO:0008483 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0043911
* Populated new object GO:0043912 (macro)
  * Changed name of GO:0043912 from "<new term>" to "D-lysine oxidase activity"
  * Set definition of GO:0043912 to "Catalysis of the reaction: D-lysine + O2 + H2O = 6-amino-2-oxohexanoate + NH3 + H2O2."
  * Added definition dbxref GOC:jl to GO:0043912
  * Added definition dbxref IMG:02957 to GO:0043912
  * Added definition dbxref PMID:17259313 to GO:0043912
  * Added general dbxref EC:1.4.3.- to GO:0043912
  * Added general dbxref IMG:02957 to GO:0043912
  * Added GO:0043912 to category gosubset_prok
  * Copied GO:0043912 to GO:0016641 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0043912
* Added synonym "mitochondrial ribosomal small subunit complex" to GO:0005763
* Changed synonym scope of GO:0005763 from "Related" to "Exact"
* Added synonym "mitochondrial ribosomal SSU complex" to GO:0005763
* Changed synonym scope of GO:0005763 from "Related" to "Exact"
* Changed name of GO:0008897 from "phosphopantetheinyltransferase activity" to "holo-[acyl-carrier-protein] synthase activity"
* Added synonym "phosphopantetheinyltransferase activity" to GO:0008897
* Changed synonym scope of GO:0008897 from "Related" to "Exact"
* Added synonym "chloroplast ribosomal large subunit complex" to GO:0022628
* Changed synonym scope of GO:0022628 from "Related" to "Exact"
* Added synonym "chloroplast ribosomal LSU complex" to GO:0022628
* Changed synonym scope of GO:0022628 from "Related" to "Exact"
* Added synonym "chloroplast ribosomal small subunit complex" to GO:0022629
* Changed synonym scope of GO:0022629 from "Related" to "Exact"
* Added synonym "chloroplast ribosomal SSU complex" to GO:0022629
* Changed synonym scope of GO:0022629 from "Related" to "Exact"
* Added general dbxref IMG:02786 to GO:0033786
* Added GO:0033786 to category gosubset_prok
* Added synonym "D-beta-D-heptose 1-phosphate adenylyltransferase activity" to GO:0033786
* Changed synonym scope of GO:0033786 from "Related" to "Exact"