[Go-diff] GO update 11/06/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_write.obo version 1.301 by 1.303

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0070096
* Populated new object GO:0070096 (macro)
  * Changed name of GO:0070096 from "<new term>" to "mitochondrial outer membrane translocase complex assembly"
  * Set definition of GO:0070096 to "The aggregation, arrangement and bonding together of a set of components to form a mitochondrial outer membrane translocase complex."
  * Added definition dbxref GOC:vk to GO:0070096
  * Copied GO:0070096 to GO:0007008 with type part_of
  * Copied GO:0070096 to GO:0043623 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070096
* Added synonym "molecular function" to GO:0003674
* Changed synonym scope of GO:0003674 from "Related" to "Exact"
* Added synonym "cellular component" to GO:0005575
* Changed synonym scope of GO:0005575 from "Related" to "Exact"
* Changed definition of GO:0007015 from "Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking." to "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking."
* Added synonym "biological process" to GO:0008150
* Changed synonym scope of GO:0008150 from "Related" to "Exact"
* Deleted GO:0008154 --OBO_REL:is_a--> GO:0030036
* Copied GO:0008154 to GO:0007015 with type OBO_REL:is_a
* Changed definition of GO:0031532 from "Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins." to "A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins."
* Added definition dbxref GOC:mah to GO:0031532
* Deleted synonym "actin cytoskeleton reorganization" from GO:0031532
* Added synonym "actin cytoskeleton reorganisation" to GO:0031532
* Changed synonym scope of GO:0031532 from "Related" to "Exact"
* Deleted GO:0032842 --OBO_REL:is_a--> GO:0043234
* Deleted GO:0032842 --OBO_REL:is_a--> GO:0044425
* Destroyed object GO:0032842
* Copied GO:0032947 to GO:0005198 with type OBO_REL:is_a
* Deleted GO:0043931 --part_of--> GO:0001501
* Deleted GO:0045010 --OBO_REL:is_a--> GO:0030036
* Copied GO:0045010 to GO:0007015 with type OBO_REL:is_a
* added secondary id GO:0032842 to GO:0045275
* Changed definition of GO:0045275 from "A part of the respiratory chain, containing about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1." to "A protein complex that transfers electrons from ubiquinol to cytochrome c and translocates two protons across a membrane. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome c1, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species."
* Deleted definition dbxref ISBN:0198547684 from GO:0045275
* Added definition dbxref PMID:16228398 to GO:0045275
* Added definition dbxref PMID:16352458 to GO:0045275
* Added definition dbxref PMID:17200733 to GO:0045275
* Added synonym "complex III" to GO:0045275
* Changed synonym scope of GO:0045275 from "Related" to "Exact"
* Added synonym "cytochrome bc(1) complex" to GO:0045275
* Changed synonym scope of GO:0045275 from "Related" to "Exact"
* Added synonym "cytochrome bc1 complex" to GO:0045275
* Changed synonym scope of GO:0045275 from "Related" to "Exact"
* Copied GO:0045275 to GO:0044425 with type OBO_REL:is_a
* Deleted general dbxref GOC:tb from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Deleted general dbxref GOC:dph from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Changed synonym scope of GO:0051663 from "Related" to "Exact"
* Deleted GO:0055005 --OBO_REL:is_a--> GO:0030029
* Copied GO:0055005 to GO:0055003 with type OBO_REL:is_a
* Deleted synonym "regulation of " from GO:0075027
* Deleted GO:0075159 --OBO_REL:is_a--> GO:0008277
* Deleted GO:0075160 --OBO_REL:is_a--> GO:0045745
* Deleted GO:0075161 --OBO_REL:is_a--> GO:0045744
* Deleted GO:0075162 --OBO_REL:is_a--> GO:0008277
* Deleted GO:0075163 --OBO_REL:is_a--> GO:0045745
* Deleted GO:0075164 --OBO_REL:is_a--> GO:0045744
* Deleted GO:0075165 --OBO_REL:is_a--> GO:0008277
* Deleted GO:0075166 --OBO_REL:is_a--> GO:0045745
* Deleted GO:0075167 --OBO_REL:is_a--> GO:0045744