[Go-diff] GO update 11/07/2008

[Remote CVS for Gene Ontology]

OBODIFF of gene_ontology_write.obo version 1.303 by 1.304

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0060352
* Created object of type obo:TERM with id GO:0060353
* Created object of type obo:TERM with id GO:0060354
* Created object of type obo:TERM with id GO:0060355
* Created object of type obo:TERM with id GO:0060356
* Created object of type obo:TERM with id GO:0060357
* Created object of type obo:TERM with id GO:0060358
* Created object of type obo:TERM with id GO:0060359
* Created object of type obo:TERM with id GO:0060360
* Populated new object GO:0060352 (macro)
  * Changed name of GO:0060352 from "<new term>" to "cell adhesion molecule production"
  * Set definition of GO:0060352 to "The appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism."
  * Added definition dbxref GOC:rl to GO:0060352
  * Copied GO:0060352 to GO:0009987 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060352
* Populated new object GO:0060353 (macro)
  * Changed name of GO:0060353 from "<new term>" to "regulation of cell adhesion molecule production"
  * Set definition of GO:0060353 to "Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism."
  * Added definition dbxref GOC:rl to GO:0060353
  * Copied GO:0060353 to GO:0050794 with type OBO_REL:is_a
  * Copied GO:0060353 to GO:0060352 with type regulates
  * Assigned namespace "biological_process" to GO:0060353
* Populated new object GO:0060354 (macro)
  * Changed name of GO:0060354 from "<new term>" to "negative regulation of cell adhesion molecule production"
  * Set definition of GO:0060354 to "Any process that decreases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism."
  * Added definition dbxref GOC:rl to GO:0060354
  * Copied GO:0060354 to GO:0060353 with type OBO_REL:is_a
  * Copied GO:0060354 to GO:0060352 with type negatively_regulates
  * Assigned namespace "biological_process" to GO:0060354
* Populated new object GO:0060355 (macro)
  * Changed name of GO:0060355 from "<new term>" to "positive regulation of cell adhesion molecule production"
  * Set definition of GO:0060355 to "Any process that increases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism."
  * Added definition dbxref GOC:rl to GO:0060355
  * Copied GO:0060355 to GO:0048522 with type OBO_REL:is_a
  * Copied GO:0060355 to GO:0060352 with type positively_regulates
  * Copied GO:0060355 to GO:0060353 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060355
* Populated new object GO:0060356 (macro)
  * Changed name of GO:0060356 from "<new term>" to "leucine import"
  * Set definition of GO:0060356 to "The directed movement of leucine into a cell or organelle."
  * Added definition dbxref GOC:dph to GO:0060356
  * Added definition dbxref GOC:tb to GO:0060356
  * Added synonym "L-leucine import" to GO:0060356
  * Changed synonym scope of GO:0060356 from "Related" to "Narrow"
  * Added synonym "L-leucine uptake" to GO:0060356
  * Changed synonym scope of GO:0060356 from "Related" to "Narrow"
  * Added synonym "leucine uptake" to GO:0060356
  * Changed synonym scope of GO:0060356 from "Related" to "Exact"
  * Copied GO:0060356 to GO:0015820 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060356
* Populated new object GO:0060357 (macro)
  * Changed name of GO:0060357 from "<new term>" to "regulation of leucine import"
  * Set definition of GO:0060357 to "Any process that modulates the rate, frequency or extent of leucine import. Leucine import is the directed movement of leucine into a cell or organelle."
  * Added definition dbxref GOC:dph to GO:0060357
  * Added definition dbxref GOC:tb to GO:0060357
  * Added synonym "regulation of L-leucine import" to GO:0060357
  * Added general dbxref GOC:tb to synonym regulation of L-leucine import of GO:0060357
  * Added general dbxref GOC:dph to synonym regulation of L-leucine import of GO:0060357
  * Changed synonym scope of GO:0060357 from "Related" to "Narrow"
  * Added synonym "regulation of L-leucine uptake" to GO:0060357
  * Added general dbxref GOC:tb to synonym regulation of L-leucine uptake of GO:0060357
  * Added general dbxref GOC:dph to synonym regulation of L-leucine uptake of GO:0060357
  * Changed synonym scope of GO:0060357 from "Related" to "Narrow"
  * Added synonym "regulation of leucine uptake" to GO:0060357
  * Added general dbxref GOC:tb to synonym regulation of leucine uptake of GO:0060357
  * Added general dbxref GOC:dph to synonym regulation of leucine uptake of GO:0060357
  * Changed synonym scope of GO:0060357 from "Related" to "Exact"
  * Copied GO:0060357 to GO:0060356 with type regulates
  * Copied GO:0060357 to GO:0051955 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060357
* Populated new object GO:0060358 (macro)
  * Changed name of GO:0060358 from "<new term>" to "negative regulation of leucine import"
  * Set definition of GO:0060358 to "Any process that decreases the rate, frequency or extent of leucine import. Leucine import is the directed movement of leucine into a cell or organelle."
  * Added definition dbxref GOC:dph to GO:0060358
  * Added definition dbxref GOC:tb to GO:0060358
  * Copied GO:0060358 to GO:0060357 with type OBO_REL:is_a
  * Copied GO:0060358 to GO:0051956 with type OBO_REL:is_a
  * Copied GO:0060358 to GO:0060356 with type negatively_regulates
  * Assigned namespace "biological_process" to GO:0060358
* Populated new object GO:0060359 (macro)
  * Changed name of GO:0060359 from "<new term>" to "response to ammonium ion"
  * Set definition of GO:0060359 to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium ion stimulus."
  * Added definition dbxref GOC:dph to GO:0060359
  * Added definition dbxref GOC:tb to GO:0060359
  * Copied GO:0060359 to GO:0010035 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060359
* Populated new object GO:0060360 (macro)
  * Changed name of GO:0060360 from "<new term>" to "negative regulation of leucine import in response to ammonium ion"
  * Set definition of GO:0060360 to "Any process that decreases the rate, frequency or extent of leucine import as a result of an ammonium ion stimulus. Leucine import is the directed movement of leucine into a cell or organelle."
  * Added definition dbxref GOC:dph to GO:0060360
  * Added definition dbxref GOC:tb to GO:0060360
  * Added synonym "negative regulation of leucine uptake in response to ammonium ion" to GO:0060360
  * Changed synonym scope of GO:0060360 from "Related" to "Exact"
  * Copied GO:0060360 to GO:0060359 with type OBO_REL:is_a
  * Copied GO:0060360 to GO:0060358 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060360
* Deleted GO:0010468 --OBO_REL:is_a--> GO:0050794
* Copied GO:0010468 to GO:0060255 with type OBO_REL:is_a
* Deleted GO:0010628 --OBO_REL:is_a--> GO:0048522
* Copied GO:0010628 to GO:0010604 with type OBO_REL:is_a
* Deleted GO:0010629 --OBO_REL:is_a--> GO:0048523
* Copied GO:0010629 to GO:0010605 with type OBO_REL:is_a
* Copied GO:0048522 to GO:0048523 with type OBO_REL:is_a
* Deleted general dbxref GOC:tb from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Deleted general dbxref GOC:dph from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Changed synonym scope of GO:0051663 from "Related" to "Exact"