[Go-diff] GO update 11/19/2008
Remote CVS for Gene Ontology
gocvs at genome.stanford.edu
Wed Nov 19 21:30:48 PST 2008
OBODIFF of gene_ontology_write.obo version 1.316 by 1.321
Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0010818
* Created object of type obo:TERM with id GO:0010819
* Created object of type obo:TERM with id GO:0010820
* Created object of type obo:TERM with id GO:0043955
* Created object of type obo:TERM with id GO:0043956
* Created object of type obo:TERM with id GO:0043957
* Created object of type obo:TERM with id GO:0043958
* Created object of type obo:TERM with id GO:0043959
* Created object of type obo:TERM with id GO:0043960
* Created object of type obo:TERM with id GO:0043961
* Created object of type obo:TERM with id GO:0070123
* Created object of type obo:TERM with id GO:0070124
* Created object of type obo:TERM with id GO:0070125
* Created object of type obo:TERM with id GO:0070126
* Created object of type obo:TERM with id GO:0070127
* Created object of type obo:TERM with id GO:0070128
* Created object of type obo:TERM with id GO:0070129
* Created object of type obo:TERM with id GO:0070130
* Created object of type obo:TERM with id GO:0070131
* Created object of type obo:TERM with id GO:0070132
* Created object of type obo:TERM with id GO:0070133
* Created object of type obo:TERM with id GO:0070134
* Created object of type obo:TERM with id GO:0070135
* Created object of type obo:TERM with id GO:0070136
* Populated new object GO:0010818 (macro)
* Changed name of GO:0010818 from "<new term>" to "T cell chemotaxis"
* Set definition of GO:0010818 to "The directed movement of a T cell in response to an external stimulus. A T cell is a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex."
* Added definition dbxref GOC:dph to GO:0010818
* Added definition dbxref GOC:tb to GO:0010818
* Copied GO:0010818 to GO:0048247 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0010818
* Populated new object GO:0010819 (macro)
* Changed name of GO:0010819 from "<new term>" to "regulation of T cell chemotaxis"
* Set definition of GO:0010819 to "Any process that modulates the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus."
* Added definition dbxref GOC:dph to GO:0010819
* Added definition dbxref GOC:tb to GO:0010819
* Copied GO:0010819 to GO:0010818 with type regulates
* Copied GO:0010819 to GO:0002688 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0010819
* Populated new object GO:0010820 (macro)
* Changed name of GO:0010820 from "<new term>" to "positive regulation of T cell chemotaxis"
* Set definition of GO:0010820 to "Any process that increases the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus."
* Added definition dbxref GOC:dph to GO:0010820
* Added definition dbxref GOC:tb to GO:0010820
* Copied GO:0010820 to GO:0002690 with type OBO_REL:is_a
* Copied GO:0010820 to GO:0010818 with type positively_regulates
* Copied GO:0010820 to GO:0010819 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0010820
* Populated new object GO:0043955 (macro)
* Changed name of GO:0043955 from "<new term>" to "3-hydroxypropionyl-CoA synthetase activity"
* Added comment "Note that this function is one of the activities of the trifunctional enzyme propionyl-coenzyme A synthase. See PMID:11821399."
* Set definition of GO:0043955 to "Catalysis of the reaction: 3-hydroxypropionate + ATP + CoA = 3-hydroxypropionyl-CoA + AMP + pyrophosphate."
* Added definition dbxref GOC:jl to GO:0043955
* Added definition dbxref PMID:11821399 to GO:0043955
* Added general dbxref EC:6.2.1.- to GO:0043955
* Added general dbxref IMG:03293 to GO:0043955
* Added GO:0043955 to category gosubset_prok
* Added synonym "3-hydroxy propionyl-CoA synthetase activity" to GO:0043955
* Changed synonym scope of GO:0043955 from "Related" to "Exact"
* Added synonym "acetyl-coenzyme A synthetase" to GO:0043955
* Changed synonym scope of GO:0043955 from "Related" to "Broad"
* Added synonym "acetyl-coenzyme A synthetase/GroES-like domain" to GO:0043955
* Changed synonym scope of GO:0043955 from "Related" to "Narrow"
* Added synonym "AMP-dependent synthetase and ligase" to GO:0043955
* Changed synonym scope of GO:0043955 from "Related" to "Broad"
* Added synonym "AMP-dependent synthetase and ligase:Enoyl-CoA hydratase/isomerase" to GO:0043955
* Changed synonym scope of GO:0043955 from "Related" to "Broad"
* Added synonym "enoyl-CoA hydratase/isomerase" to GO:0043955
* Changed synonym scope of GO:0043955 from "Related" to "Broad"
* Copied GO:0043955 to GO:0016878 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0043955
* Populated new object GO:0043956 (macro)
* Changed name of GO:0043956 from "<new term>" to "3-hydroxypropionyl-CoA dehydratase activity"
* Added comment "Note that this function is one of the activities of the trifunctional enzyme propionyl-coenzyme A synthase. See PMID:11821399."
* Set definition of GO:0043956 to "Catalysis of the reaction: 3-hydroxypropionyl-CoA = acrylyl-CoA + H2O."
* Added definition dbxref GOC:jl to GO:0043956
* Added definition dbxref PMID:11821399 to GO:0043956
* Added general dbxref EC:4.2.1.- to GO:0043956
* Added general dbxref IMG:03294 to GO:0043956
* Added GO:0043956 to category gosubset_prok
* Added synonym "3-hydroxy propionyl-CoA dehydratase activity" to GO:0043956
* Changed synonym scope of GO:0043956 from "Related" to "Exact"
* Added synonym "acetyl-coenzyme A synthetase" to GO:0043956
* Changed synonym scope of GO:0043956 from "Related" to "Broad"
* Added synonym "acetyl-coenzyme A synthetase/GroES-like domain" to GO:0043956
* Changed synonym scope of GO:0043956 from "Related" to "Broad"
* Added synonym "AMP-dependent synthetase and ligase" to GO:0043956
* Changed synonym scope of GO:0043956 from "Related" to "Broad"
* Added synonym "AMP-dependent synthetase and ligase:Enoyl-CoA hydratase/isomerase" to GO:0043956
* Changed synonym scope of GO:0043956 from "Related" to "Broad"
* Added synonym "enoyl-CoA hydratase/isomerase" to GO:0043956
* Changed synonym scope of GO:0043956 from "Related" to "Broad"
* Copied GO:0043956 to GO:0016836 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0043956
* Populated new object GO:0043957 (macro)
* Changed name of GO:0043957 from "<new term>" to "acrylyl-CoA reductase (NADPH) activity"
* Added comment "Note that this function is one of the activities of the trifunctional enzyme propionyl-coenzyme A synthase. See PMID:11821399."
* Set definition of GO:0043957 to "Catalysis of the reaction: acrylyl-CoA + NADPH + H+ = propionyl-CoA + NADP+."
* Added definition dbxref GOC:jl to GO:0043957
* Added definition dbxref PMID:11821399 to GO:0043957
* Added general dbxref EC:1.3.1.- to GO:0043957
* Added general dbxref IMG:03302 to GO:0043957
* Added GO:0043957 to category gosubset_prok
* Added synonym "acetyl-coenzyme A synthetase" to GO:0043957
* Changed synonym scope of GO:0043957 from "Related" to "Broad"
* Added synonym "acetyl-coenzyme A synthetase/GroES-like domain" to GO:0043957
* Changed synonym scope of GO:0043957 from "Related" to "Broad"
* Added synonym "AMP-dependent synthetase and ligase" to GO:0043957
* Changed synonym scope of GO:0043957 from "Related" to "Broad"
* Added synonym "AMP-dependent synthetase and ligase:enoyl-CoA hydratase/isomerase" to GO:0043957
* Changed synonym scope of GO:0043957 from "Related" to "Broad"
* Added synonym "enoyl-CoA hydratase/isomerase" to GO:0043957
* Changed synonym scope of GO:0043957 from "Related" to "Broad"
* Copied GO:0043957 to GO:0016628 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0043957
* Populated new object GO:0043958 (macro)
* Changed name of GO:0043958 from "<new term>" to "acryloyl-CoA reductase activity"
* Added comment "Note that this function is part of the process of L-alanine fermentation to propionate."
* Set definition of GO:0043958 to "Catalysis of the reaction: reduced electron transferring flavoprotein + NADH + acrylyl-CoA = NAD+ + oxidized electron transferring flavoprotein + propionyl-CoA."
* Added definition dbxref GOC:jl to GO:0043958
* Added definition dbxref PMID:12603323 to GO:0043958
* Added general dbxref EC:1.3.1.- to GO:0043958
* Added general dbxref IMG:01636 to GO:0043958
* Added general dbxref MetaCyc:CPLX-7247 to GO:0043958
* Added GO:0043958 to category gosubset_prok
* Added synonym "acryloyl-coenzyme A reductase activity" to GO:0043958
* Changed synonym scope of GO:0043958 from "Related" to "Exact"
* Added synonym "acrylyl-CoA reductase (NADH)" to GO:0043958
* Changed synonym scope of GO:0043958 from "Related" to "Exact"
* Added synonym "propionyl-CoA dehydrogenase" to GO:0043958
* Changed synonym scope of GO:0043958 from "Related" to "Exact"
* Copied GO:0043958 to GO:0016628 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0043958
* Populated new object GO:0043959 (macro)
* Changed name of GO:0043959 from "<new term>" to "L-erythro-3-methylmalyl-CoA lyase activity"
* Set definition of GO:0043959 to "Catalysis of the reaction: propionyl-CoA + glyoxylate = L-erythro-3-methylmalyl-CoA."
* Added definition dbxref GOC:jl to GO:0043959
* Added definition dbxref IMG:03303 to GO:0043959
* Added general dbxref EC:4.1.3.- to GO:0043959
* Added general dbxref IMG:03303 to GO:0043959
* Added GO:0043959 to category gosubset_prok
* Added synonym "HpcH/HpaI aldolase" to GO:0043959
* Copied GO:0043959 to GO:0016833 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0043959
* Populated new object GO:0043960 (macro)
* Changed name of GO:0043960 from "<new term>" to "L-erythro-3-methylmalyl-CoA dehydratase activity"
* Set definition of GO:0043960 to "Catalysis of the reaction: L-erythro-3-methylmalyl-CoA = mesaconyl-CoA + H2O."
* Added definition dbxref GOC:jl to GO:0043960
* Added definition dbxref IMG:03304 to GO:0043960
* Added general dbxref EC:4.2.1.- to GO:0043960
* Added general dbxref IMG:03304 to GO:0043960
* Added GO:0043960 to category gosubset_prok
* Copied GO:0043960 to GO:0016836 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0043960
* Populated new object GO:0043961 (macro)
* Changed name of GO:0043961 from "<new term>" to "succinyl-CoA:(R)-citramalate CoA-transferase activity"
* Set definition of GO:0043961 to "Catalysis of the reaction: succinyl-CoA + (R)-citramalate = succinate + (R)-citramalyl-CoA."
* Added definition dbxref GOC:jl to GO:0043961
* Added definition dbxref IMG:03306 to GO:0043961
* Added definition dbxref PMID:17259315 to GO:0043961
* Added general dbxref EC:2.8.3.- to GO:0043961
* Added general dbxref IMG:03306 to GO:0043961
* Added GO:0043961 to category gosubset_prok
* Added synonym "L-carnitine dehydratase/bile acid-inducible protein F" to GO:0043961
* Added synonym "succinyl-CoA:(R)-citramalate CoA transferase activity" to GO:0043961
* Changed synonym scope of GO:0043961 from "Related" to "Exact"
* Added synonym "succinyl-CoA:R-citramalate CoA transferase" to GO:0043961
* Changed synonym scope of GO:0043961 from "Related" to "Exact"
* Copied GO:0043961 to GO:0008410 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0043961
* Populated new object GO:0070123 (macro)
* Changed name of GO:0070123 from "<new term>" to "transforming growth factor beta receptor activity, type III"
* Set definition of GO:0070123 to "Combining with transforming growth factor beta to initiate a change in cell activity; facilitates ligand binding to type I and type II TGF-beta receptors."
* Added definition dbxref GOC:mah to GO:0070123
* Added definition dbxref PMID:9759503 to GO:0070123
* Added synonym "betaglycan" to GO:0070123
* Changed synonym scope of GO:0070123 from "Related" to "Narrow"
* Added synonym "endoglin" to GO:0070123
* Changed synonym scope of GO:0070123 from "Related" to "Narrow"
* Added synonym "transforming growth factor beta ligand binding to type III receptor" to GO:0070123
* Added synonym "type III TGF-beta receptor activity" to GO:0070123
* Changed synonym scope of GO:0070123 from "Related" to "Exact"
* Added synonym "type III TGFbeta receptor activity" to GO:0070123
* Changed synonym scope of GO:0070123 from "Related" to "Exact"
* Added synonym "type III transforming growth factor beta receptor activity" to GO:0070123
* Changed synonym scope of GO:0070123 from "Related" to "Exact"
* Copied GO:0070123 to GO:0005024 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070123
* Populated new object GO:0070124 (macro)
* Changed name of GO:0070124 from "<new term>" to "mitochondrial translational initiation"
* Set definition of GO:0070124 to "The process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA."
* Added definition dbxref GOC:mah to GO:0070124
* Added synonym "mitochondrial translation initiation" to GO:0070124
* Added general dbxref GOC:mah to synonym mitochondrial translation initiation of GO:0070124
* Changed synonym scope of GO:0070124 from "Related" to "Exact"
* Copied GO:0070124 to GO:0006413 with type OBO_REL:is_a
* Copied GO:0070124 to GO:0032543 with type part_of
* Assigned namespace "biological_process" to GO:0070124
* Populated new object GO:0070125 (macro)
* Changed name of GO:0070125 from "<new term>" to "mitochondrial translational elongation"
* Set definition of GO:0070125 to "The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070125
* Added synonym "mitochondrial translation elongation" to GO:0070125
* Added general dbxref GOC:mah to synonym mitochondrial translation elongation of GO:0070125
* Changed synonym scope of GO:0070125 from "Related" to "Exact"
* Copied GO:0070125 to GO:0006414 with type OBO_REL:is_a
* Copied GO:0070125 to GO:0032543 with type part_of
* Assigned namespace "biological_process" to GO:0070125
* Populated new object GO:0070126 (macro)
* Changed name of GO:0070126 from "<new term>" to "mitochondrial translational termination"
* Set definition of GO:0070126 to "The process resulting in the release of a polypeptide chain from the ribosome in a mitochondrion, usually in response to a termination codon (note that mitochondria use variants of the universal genetic code that differ between different taxa)."
* Added definition dbxref GOC:mah to GO:0070126
* Added definition dbxref http:mitogenome.org/index.php/Genetic_Code_of_mitochondria to GO:0070126
* Added synonym "mitochondrial translation termination" to GO:0070126
* Added general dbxref GOC:mah to synonym mitochondrial translation termination of GO:0070126
* Changed synonym scope of GO:0070126 from "Related" to "Exact"
* Copied GO:0070126 to GO:0032543 with type part_of
* Copied GO:0070126 to GO:0006415 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070126
* Populated new object GO:0070127 (macro)
* Changed name of GO:0070127 from "<new term>" to "tRNA aminoacylation for mitochondrial protein translation"
* Set definition of GO:0070127 to "The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070127
* Copied GO:0070127 to GO:0032543 with type part_of
* Copied GO:0070127 to GO:0006413 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070127
* Populated new object GO:0070128 (macro)
* Changed name of GO:0070128 from "<new term>" to "conversion of mitochondrial met-tRNAf to fmet-tRNA"
* Set definition of GO:0070128 to "The process whereby methionine carried by an initiator methionine tRNA ina mitochondrion is N-formylated."
* Added definition dbxref GOC:mah to GO:0070128
* Added synonym "mitochondrial N-terminal peptidyl-methionine N-formylation" to GO:0070128
* Changed synonym scope of GO:0070128 from "Related" to "Exact"
* Copied GO:0070128 to GO:0006413 with type part_of
* Copied GO:0070128 to GO:0001718 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070128
* Populated new object GO:0070129 (macro)
* Changed name of GO:0070129 from "<new term>" to "regulation of mitochondrial translation"
* Set definition of GO:0070129 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070129
* Added synonym "regulation of mitochondrial protein anabolism" to GO:0070129
* Added general dbxref GOC:mah to synonym regulation of mitochondrial protein anabolism of GO:0070129
* Changed synonym scope of GO:0070129 from "Related" to "Exact"
* Added synonym "regulation of mitochondrial protein biosynthesis" to GO:0070129
* Added general dbxref GOC:mah to synonym regulation of mitochondrial protein biosynthesis of GO:0070129
* Changed synonym scope of GO:0070129 from "Related" to "Exact"
* Added synonym "regulation of mitochondrial protein formation" to GO:0070129
* Added general dbxref GOC:mah to synonym regulation of mitochondrial protein formation of GO:0070129
* Changed synonym scope of GO:0070129 from "Related" to "Exact"
* Added synonym "regulation of mitochondrial protein synthesis" to GO:0070129
* Added general dbxref GOC:mah to synonym regulation of mitochondrial protein synthesis of GO:0070129
* Changed synonym scope of GO:0070129 from "Related" to "Exact"
* Copied GO:0070129 to GO:0032543 with type regulates
* Copied GO:0070129 to GO:0006417 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070129
* Populated new object GO:0070130 (macro)
* Changed name of GO:0070130 from "<new term>" to "negative regulation of mitochondrial translation"
* Set definition of GO:0070130 to "Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070130
* Added synonym "negative regulation of mitochondrial protein anabolism" to GO:0070130
* Added general dbxref GOC:mah to synonym negative regulation of mitochondrial protein anabolism of GO:0070130
* Changed synonym scope of GO:0070130 from "Related" to "Exact"
* Added synonym "negative regulation of mitochondrial protein biosynthesis" to GO:0070130
* Added general dbxref GOC:mah to synonym negative regulation of mitochondrial protein biosynthesis of GO:0070130
* Changed synonym scope of GO:0070130 from "Related" to "Exact"
* Added synonym "negative regulation of mitochondrial protein formation" to GO:0070130
* Added general dbxref GOC:mah to synonym negative regulation of mitochondrial protein formation of GO:0070130
* Changed synonym scope of GO:0070130 from "Related" to "Exact"
* Added synonym "negative regulation of mitochondrial protein synthesis" to GO:0070130
* Added general dbxref GOC:mah to synonym negative regulation of mitochondrial protein synthesis of GO:0070130
* Changed synonym scope of GO:0070130 from "Related" to "Exact"
* Copied GO:0070130 to GO:0017148 with type OBO_REL:is_a
* Copied GO:0070130 to GO:0070129 with type OBO_REL:is_a
* Copied GO:0070130 to GO:0032543 with type negatively_regulates
* Assigned namespace "biological_process" to GO:0070130
* Populated new object GO:0070131 (macro)
* Changed name of GO:0070131 from "<new term>" to "positive regulation of mitochondrial translation"
* Set definition of GO:0070131 to "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070131
* Added synonym "positive regulation of mitochondrial protein anabolism" to GO:0070131
* Added general dbxref GOC:mah to synonym positive regulation of mitochondrial protein anabolism of GO:0070131
* Changed synonym scope of GO:0070131 from "Related" to "Exact"
* Added synonym "positive regulation of mitochondrial protein biosynthesis" to GO:0070131
* Added general dbxref GOC:mah to synonym positive regulation of mitochondrial protein biosynthesis of GO:0070131
* Changed synonym scope of GO:0070131 from "Related" to "Exact"
* Added synonym "positive regulation of mitochondrial protein formation" to GO:0070131
* Added general dbxref GOC:mah to synonym positive regulation of mitochondrial protein formation of GO:0070131
* Changed synonym scope of GO:0070131 from "Related" to "Exact"
* Added synonym "positive regulation of mitochondrial protein synthesis" to GO:0070131
* Added general dbxref GOC:mah to synonym positive regulation of mitochondrial protein synthesis of GO:0070131
* Changed synonym scope of GO:0070131 from "Related" to "Exact"
* Copied GO:0070131 to GO:0032543 with type positively_regulates
* Copied GO:0070131 to GO:0045727 with type OBO_REL:is_a
* Copied GO:0070131 to GO:0070129 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070131
* Populated new object GO:0070132 (macro)
* Changed name of GO:0070132 from "<new term>" to "regulation of mitochondrial translational initiation"
* Set definition of GO:0070132 to "Any process that modulates the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070132
* Added synonym "regulation of mitochondrial translation initiation" to GO:0070132
* Added general dbxref GOC:mah to synonym regulation of mitochondrial translation initiation of GO:0070132
* Changed synonym scope of GO:0070132 from "Related" to "Exact"
* Copied GO:0070132 to GO:0070124 with type regulates
* Copied GO:0070132 to GO:0006446 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070132
* Populated new object GO:0070133 (macro)
* Changed name of GO:0070133 from "<new term>" to "negative regulation of mitochondrial translational initiation"
* Set definition of GO:0070133 to "Any process that stops, prevents or reduces the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070133
* Added synonym "negative regulation of mitochondrial translation initiation" to GO:0070133
* Added general dbxref GOC:mah to synonym negative regulation of mitochondrial translation initiation of GO:0070133
* Changed synonym scope of GO:0070133 from "Related" to "Exact"
* Copied GO:0070133 to GO:0045947 with type OBO_REL:is_a
* Copied GO:0070133 to GO:0070124 with type negatively_regulates
* Copied GO:0070133 to GO:0070132 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070133
* Populated new object GO:0070134 (macro)
* Changed name of GO:0070134 from "<new term>" to "positive regulation of mitochondrial translational initiation"
* Set definition of GO:0070134 to "Any process that activates or increases the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion."
* Added definition dbxref GOC:mah to GO:0070134
* Added synonym "positive regulation of mitochondrial translation initiation" to GO:0070134
* Added general dbxref GOC:mah to synonym positive regulation of mitochondrial translation initiation of GO:0070134
* Changed synonym scope of GO:0070134 from "Related" to "Exact"
* Copied GO:0070134 to GO:0070124 with type positively_regulates
* Copied GO:0070134 to GO:0045948 with type OBO_REL:is_a
* Copied GO:0070134 to GO:0070132 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070134
* Populated new object GO:0070135 (macro)
* Changed name of GO:0070135 from "<new term>" to "beta-1,2-oligomannoside metabolic process"
* Set definition of GO:0070135 to "The chemical reactions and pathways involving beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan."
* Added definition dbxref GOC:mah to GO:0070135
* Added definition dbxref PMID:18234669 to GO:0070135
* Added synonym "beta-1,2-oligomannoside metabolism" to GO:0070135
* Added general dbxref GOC:mah to synonym beta-1,2-oligomannoside metabolism of GO:0070135
* Changed synonym scope of GO:0070135 from "Related" to "Exact"
* Copied GO:0070135 to GO:0010383 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070135
* Populated new object GO:0070136 (macro)
* Changed name of GO:0070136 from "<new term>" to "beta-1,2-oligomannoside biosynthetic process"
* Set definition of GO:0070136 to "The chemical reactions and pathways resulting in the formation of beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan."
* Added definition dbxref GOC:mah to GO:0070136
* Added definition dbxref PMID:18234669 to GO:0070136
* Added synonym "beta-1,2-oligomannoside anabolism" to GO:0070136
* Added general dbxref GOC:mah to synonym beta-1,2-oligomannoside anabolism of GO:0070136
* Changed synonym scope of GO:0070136 from "Related" to "Exact"
* Added synonym "beta-1,2-oligomannoside biosynthesis" to GO:0070136
* Added general dbxref GOC:mah to synonym beta-1,2-oligomannoside biosynthesis of GO:0070136
* Changed synonym scope of GO:0070136 from "Related" to "Exact"
* Added synonym "beta-1,2-oligomannoside formation" to GO:0070136
* Added general dbxref GOC:mah to synonym beta-1,2-oligomannoside formation of GO:0070136
* Changed synonym scope of GO:0070136 from "Related" to "Exact"
* Added synonym "beta-1,2-oligomannoside synthesis" to GO:0070136
* Added general dbxref GOC:mah to synonym beta-1,2-oligomannoside synthesis of GO:0070136
* Changed synonym scope of GO:0070136 from "Related" to "Exact"
* Copied GO:0070136 to GO:0051278 with type OBO_REL:is_a
* Copied GO:0070136 to GO:0070135 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070136
* Added GO:0005626 to category gosubset_prok
* Copied GO:0007317 to GO:0022604 with type OBO_REL:is_a
* Copied GO:0008359 to GO:0022604 with type OBO_REL:is_a
* Changed definition of GO:0015239 from "Enables the directed movement of drugs into, out of, within or between cells." to "Enables the directed movement of drugs across a membrane into, out of, within or between cells."
* Added definition dbxref GOC:mah to GO:0015239
* Copied GO:0015239 to GO:0022857 with type OBO_REL:is_a
* Set definition of GO:0016849 to "Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond."
* Added definition dbxref GOC:jl to GO:0016849
* Deleted GO:0018728 --OBO_REL:is_a--> GO:0008410
* Destroyed object GO:0018728
* Removed GO:0030582 from category gosubset_prok
* Added GO:0030659 to category gosubset_prok
* Added GO:0033202 to category gosubset_prok
* added secondary id GO:0018728 to GO:0033877
* Added general dbxref UM-BBD_enzymeID:e0260 to GO:0033877
* Added synonym "succinyl-CoA:benzylsuccinate CoA-transferase activity" to GO:0033877
* Changed synonym scope of GO:0033877 from "Related" to "Exact"
* Copied GO:0034242 to GO:0051093 with type OBO_REL:is_a
* Added GO:0034641 to category gosubset_prok
* Added GO:0034660 to category gosubset_prok
* Added GO:0034708 to category gosubset_prok
* Added GO:0034755 to category gosubset_prok
* Added GO:0043527 to category gosubset_prok
* Added GO:0043624 to category gosubset_prok
* Deleted GO:0045631 --OBO_REL:is_a--> GO:0045595
* Copied GO:0045631 to GO:0045664 with type OBO_REL:is_a
* Deleted GO:0045632 --OBO_REL:is_a--> GO:0045596
* Copied GO:0045632 to GO:0045665 with type OBO_REL:is_a
* Deleted GO:0045633 --OBO_REL:is_a--> GO:0045597
* Copied GO:0045633 to GO:0045666 with type OBO_REL:is_a
* Copied GO:0045664 to GO:0045595 with type OBO_REL:is_a
* Deleted GO:0046532 --OBO_REL:is_a--> GO:0045595
* Copied GO:0046532 to GO:0045664 with type OBO_REL:is_a
* Deleted GO:0046533 --OBO_REL:is_a--> GO:0045596
* Copied GO:0046533 to GO:0045665 with type OBO_REL:is_a
* Deleted GO:0046534 --OBO_REL:is_a--> GO:0045597
* Copied GO:0046534 to GO:0045666 with type OBO_REL:is_a
* Added GO:0048874 to category gosubset_prok
* Deleted GO:0050767 --OBO_REL:is_a--> GO:0060284
* Deleted general dbxref GOC:tb from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Deleted general dbxref GOC:dph from synonym oocyte nucleus localization during oocyte axis determination of GO:0051663
* Changed synonym scope of GO:0051663 from "Related" to "Exact"
* Copied GO:0060142 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0060143 to GO:0051094 with type OBO_REL:is_a
* Added GO:0070011 to category gosubset_prok
* Added GO:0070071 to category gosubset_prok
* Copied GO:0075072 to GO:0051701 with type part_of
* Deleted GO:0075073 --OBO_REL:is_a--> GO:0051701
More information about the Go-diff
mailing list