[Go-diff] GO update 10/07/2008

Tue Oct 7 21:30:47 PDT 2008

OBODIFF of gene_ontology_write.obo version 1.255 by 1.256

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Added comment "This term was made obsolete because it represents a gene product and is named based on protein features."
* Changed definition of GO:0001584 from "A G-protein coupled receptor that is structurally/functionally related to the rhodopsin receptor." to "OBSOLETE. A G-protein coupled receptor that is structurally/functionally related to the rhodopsin receptor."
* Added definition dbxref GOC:mah to GO:0001584
* Deleted GO:0001584 --OBO_REL:is_a--> GO:0004930
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 1e12a3a
* Changed name of GO:0001588 from "dopamine D1 receptor-like receptor activity" to "dopamine receptor coupled via Gs"
* Changed definition of GO:0001588 from "A G-protein coupled receptor that binds the neurotransmitter dopamine and activates adenylate cyclase via coupling to Gs." to "Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gs to initiate a change in cell activity."
* Added definition dbxref GOC:mah to GO:0001588
* Changed name of GO:0001591 from "dopamine D2 receptor-like receptor activity" to "dopamine receptor coupled via Gi/Go"
* Changed definition of GO:0001591 from "A G-protein coupled receptor that binds the neurotransmitter dopamine and inhibits adenylate cyclase via coupling to Gi/Go." to "Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gi/Go to initiate a change in cell activity."
* Added definition dbxref GOC:mah to GO:0001591
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001598 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001598
* Deleted GO:0001598 --OBO_REL:is_a--> GO:0008528
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 1cb1408
* Deleted GO:0001603 --OBO_REL:is_a--> GO:0008528
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 1902151
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001606 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001606
* Deleted GO:0001606 --OBO_REL:is_a--> GO:0008528
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 17b7cd4
* Deleted GO:0001608 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001608 to GO:0004930 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001615 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001615
* Deleted GO:0001615 --OBO_REL:is_a--> GO:0001584
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 405378
* Deleted GO:0001616 --OBO_REL:is_a--> GO:0001615
* Copied GO:0001616 to GO:0004930 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001617 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001617
* Deleted GO:0001617 --OBO_REL:is_a--> GO:0001615
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 128050e
* Deleted GO:0001619 --OBO_REL:is_a--> GO:0001584
* Deleted GO:0001621 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001621 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0001622 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001622 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0001623 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001623 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0001624 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001624 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0001625 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001625 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0001626 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001626 to GO:0004930 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001627 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001627
* Deleted GO:0001627 --OBO_REL:is_a--> GO:0001584
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 63e916
* Deleted GO:0001628 --OBO_REL:is_a--> GO:0001584
* Copied GO:0001628 to GO:0004930 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001629 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001629
* Deleted GO:0001629 --OBO_REL:is_a--> GO:0001584
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 15bbb25
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001630 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001630
* Deleted GO:0001630 --OBO_REL:is_a--> GO:0001584
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 15b8b3f
* Added comment "This term was made obsolete because it represents a gene product and is named based on protein features."
* Changed definition of GO:0001633 from "A G-protein coupled receptor that is structurally/functionally related to the secretin receptor." to "OBSOLETE. A G-protein coupled receptor that is structurally/functionally related to the secretin receptor."
* Added definition dbxref GOC:mah to GO:0001633
* Deleted GO:0001633 --OBO_REL:is_a--> GO:0004930
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 112dbf2
* Deleted GO:0001634 --OBO_REL:is_a--> GO:0001633
* Copied GO:0001634 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0001635 --OBO_REL:is_a--> GO:0001633
* Copied GO:0001635 to GO:0004930 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0001636 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0001636
* Deleted GO:0001636 --OBO_REL:is_a--> GO:0001633
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 12628ea
* Deleted GO:0001639 --OBO_REL:is_a--> GO:0008067
* Copied GO:0001639 to GO:0008066 with type OBO_REL:is_a
* Deleted GO:0001640 --OBO_REL:is_a--> GO:0008067
* Copied GO:0001640 to GO:0008066 with type OBO_REL:is_a
* Added synonym "ligand-dependent GPCR activity" to GO:0004930
* Changed synonym scope of GO:0004930 from "Related" to "Exact"
* Deleted GO:0004948 --OBO_REL:is_a--> GO:0001633
* Copied GO:0004948 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004949 --OBO_REL:is_a--> GO:0001584
* Copied GO:0004949 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004953 --OBO_REL:is_a--> GO:0001584
* Copied GO:0004953 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004965 --OBO_REL:is_a--> GO:0008067
* Copied GO:0004965 to GO:0008066 with type OBO_REL:is_a
* Deleted GO:0004967 --OBO_REL:is_a--> GO:0001633
* Copied GO:0004967 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004974 --OBO_REL:is_a--> GO:0001584
* Copied GO:0004974 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004984 --OBO_REL:is_a--> GO:0001584
* Copied GO:0004984 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004990 --OBO_REL:is_a--> GO:0001603
* Copied GO:0004990 to GO:0008528 with type OBO_REL:is_a
* Deleted GO:0004991 --OBO_REL:is_a--> GO:0001633
* Copied GO:0004991 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004992 --OBO_REL:is_a--> GO:0001584
* Copied GO:0004992 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004997 --OBO_REL:is_a--> GO:0001615
* Copied GO:0004997 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0004999 --OBO_REL:is_a--> GO:0001633
* Copied GO:0004999 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0005000 --OBO_REL:is_a--> GO:0001603
* Copied GO:0005000 to GO:0008528 with type OBO_REL:is_a
* Deleted GO:0008020 --OBO_REL:is_a--> GO:0001584
* Copied GO:0008020 to GO:0004930 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it represents a gene product and is named based on protein features."
* Changed definition of GO:0008067 from "A G-protein coupled receptor that is structurally/functionally related to the metabotropic glutamate receptor." to "OBSOLETE. A G-protein coupled receptor that is structurally/functionally related to the metabotropic glutamate receptor."
* Added definition dbxref GOC:mah to GO:0008067
* Deleted GO:0008067 --OBO_REL:is_a--> GO:0004930
* Deleted GO:0008067 --OBO_REL:is_a--> GO:0008066
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 482fc1
* Deleted GO:0008227 --OBO_REL:is_a--> GO:0001584
* Copied GO:0008227 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0008502 --OBO_REL:is_a--> GO:0001584
* Copied GO:0008502 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0008527 --OBO_REL:is_a--> GO:0001584
* Copied GO:0008527 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0008528 --OBO_REL:is_a--> GO:0001584
* Copied GO:0008528 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0010710 --OBO_REL:is_a--> GO:0060255
* Deleted GO:0015055 --OBO_REL:is_a--> GO:0001633
* Copied GO:0015055 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0015056 --OBO_REL:is_a--> GO:0001636
* Copied GO:0015056 to GO:0004930 with type OBO_REL:is_a
* Added comment "This term was made obsolete because it represents a gene product, was not defined, and is named based on protein features."
* Set definition of GO:0015058 to "OBSOLETE (was not defined before being made obsolete)."
* Added definition dbxref GOC:mah to GO:0015058
* Deleted GO:0015058 --OBO_REL:is_a--> GO:0001633
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 1372c26
* Deleted GO:0016500 --OBO_REL:is_a--> GO:0001584
* Copied GO:0016500 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0016519 --OBO_REL:is_a--> GO:0001636
* Copied GO:0016519 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0016520 --OBO_REL:is_a--> GO:0001633
* Copied GO:0016520 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0016527 --OBO_REL:is_a--> GO:0001633
* Copied GO:0016527 to GO:0004930 with type OBO_REL:is_a
* Deleted GO:0030684 --OBO_REL:is_a--> GO:0044424
* Deleted GO:0031400 --OBO_REL:is_a--> GO:0010757