[Go-diff] GO update 10/15/2008

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Wed Oct 15 21:30:48 PDT 2008 

OBODIFF of gene_ontology_write.obo version 1.267 by 1.271

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0010782
* Created object of type obo:TERM with id GO:0010783
* Created object of type obo:TERM with id GO:0010784
* Created object of type obo:TERM with id GO:0010785
* Created object of type obo:TERM with id GO:0010786
* Created object of type obo:TERM with id GO:0010787
* Created object of type obo:TERM with id GO:0010788
* Created object of type obo:TERM with id GO:0010789
* Created object of type obo:TERM with id GO:0010790
* Created object of type obo:TERM with id GO:0080022
* Created object of type obo:TERM with id GO:0080023
* Created object of type obo:TERM with id GO:0080024
* Populated new object GO:0010782 (macro)
  * Changed name of GO:0010782 from "<new term>" to "proboscis morphogenesis, labial disc-derived"
  * Set definition of GO:0010782 to "The process by which the anatomical structures of the proboscis that are derived from the labial disc are generated and organized."
  * Added definition dbxref GOC:dph to GO:0010782
  * Added definition dbxref GOC:tb to GO:0010782
  * Copied GO:0010782 to GO:0048734 with type part_of
  * Copied GO:0010782 to GO:0009653 with type OBO_REL:is_a
  * Copied GO:0010782 to GO:0007454 with type part_of
  * Assigned namespace "biological_process" to GO:0010782
* Populated new object GO:0010783 (macro)
  * Changed name of GO:0010783 from "<new term>" to "proboscis morphogenesis, eye-antennal disc-derived"
  * Set definition of GO:0010783 to "The process by which the anatomical structures of the proboscis that are derived from the eye-antennal disc are generated and organized."
  * Added definition dbxref GOC:dph to GO:0010783
  * Added definition dbxref GOC:tb to GO:0010783
  * Copied GO:0010783 to GO:0048734 with type part_of
  * Copied GO:0010783 to GO:0009653 with type OBO_REL:is_a
  * Copied GO:0010783 to GO:0007455 with type part_of
  * Assigned namespace "biological_process" to GO:0010783
* Populated new object GO:0010784 (macro)
  * Changed name of GO:0010784 from "<new term>" to "proboscis morphogenesis, clypeo-labral disc-derived"
  * Set definition of GO:0010784 to "The process by which the anatomical structures of the proboscis that are derived from the clypeo-labral disc are generated and organized."
  * Added definition dbxref GOC:dph to GO:0010784
  * Added definition dbxref GOC:tb to GO:0010784
  * Copied GO:0010784 to GO:0009653 with type OBO_REL:is_a
  * Copied GO:0010784 to GO:0007453 with type part_of
  * Copied GO:0010784 to GO:0048734 with type part_of
  * Assigned namespace "biological_process" to GO:0010784
* Populated new object GO:0010785 (macro)
  * Changed name of GO:0010785 from "<new term>" to "clathrin coating of Golgi vesicle, plasma membrane to endosome targeting"
  * Set definition of GO:0010785 to "The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles that will move from the plasma membrane to the endosome, forming a vesicle coat."
  * Added definition dbxref GOC:dph to GO:0010785
  * Added definition dbxref GOC:tb to GO:0010785
  * Copied GO:0010785 to GO:0048201 with type part_of
  * Copied GO:0010785 to GO:0048202 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010785
* Populated new object GO:0010786 (macro)
  * Changed name of GO:0010786 from "<new term>" to "clathrin coating of Golgi vesicle, trans-Golgi to endosome targeting"
  * Set definition of GO:0010786 to "The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles that will move from the trans-Golgi to the endosome, forming a vesicle coat."
  * Added definition dbxref GOC:dph to GO:0010786
  * Added definition dbxref GOC:tb to GO:0010786
  * Copied GO:0010786 to GO:0048202 with type OBO_REL:is_a
  * Copied GO:0010786 to GO:0048203 with type part_of
  * Assigned namespace "biological_process" to GO:0010786
* Populated new object GO:0010787 (macro)
  * Changed name of GO:0010787 from "<new term>" to "COPI coating of Golgi vesicle, inter-Golgi cisterna"
  * Set definition of GO:0010787 to "The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of inter-Golgi cisterna transport vesicles, forming a vesicle coat."
  * Added definition dbxref GOC:dph to GO:0010787
  * Added definition dbxref GOC:tb to GO:0010787
  * Copied GO:0010787 to GO:0048205 with type OBO_REL:is_a
  * Copied GO:0010787 to GO:0048204 with type part_of
  * Assigned namespace "biological_process" to GO:0010787
* Populated new object GO:0010788 (macro)
  * Changed name of GO:0010788 from "<new term>" to "COPI coating of Golgi vesicle, cis-Golgi to rough ER"
  * Set definition of GO:0010788 to "The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of cis-Golgi to rough ER transport vesicles, forming a vesicle coat."
  * Added definition dbxref GOC:dph to GO:0010788
  * Added definition dbxref GOC:tb to GO:0010788
  * Copied GO:0010788 to GO:0048205 with type OBO_REL:is_a
  * Copied GO:0010788 to GO:0048206 with type part_of
  * Assigned namespace "biological_process" to GO:0010788
* Populated new object GO:0010789 (macro)
  * Changed name of GO:0010789 from "<new term>" to "meiotic sister chromatid cohesion involved in meiosis I"
  * Set definition of GO:0010789 to "The cell cycle process whereby sister chromatids of a replicated chromosome are joined along the entire length of the chromosome during meiosis I."
  * Added definition dbxref GOC:dph to GO:0010789
  * Added definition dbxref GOC:tb to GO:0010789
  * Copied GO:0010789 to GO:0007127 with type part_of
  * Copied GO:0010789 to GO:0051177 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010789
* Populated new object GO:0010790 (macro)
  * Changed name of GO:0010790 from "<new term>" to "meiotic sister chromatid cohesion involved in meiosis II"
  * Set definition of GO:0010790 to "The cell cycle process whereby sister chromatids of a replicated chromosome are joined along the entire length of the chromosome during meiosis II."
  * Added definition dbxref GOC:dph to GO:0010790
  * Added definition dbxref GOC:tb to GO:0010790
  * Copied GO:0010790 to GO:0007135 with type part_of
  * Copied GO:0010790 to GO:0051177 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010790
* Populated new object GO:0080022 (macro)
  * Changed name of GO:0080022 from "<new term>" to "primary root development"
  * Set definition of GO:0080022 to "The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle."
  * Added definition dbxref GOC:DL to GO:0080022
  * Copied GO:0080022 to GO:0048364 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0080022
* Populated new object GO:0080023 (macro)
  * Changed name of GO:0080023 from "<new term>" to "3R-hydroxyacyl-CoA dehydratase activity"
  * Set definition of GO:0080023 to "Catalysis of the reaction: 3R-hydroxyacyl-CoA = 2E-enoyl-CoA + H2O."
  * Added definition dbxref PMID:16982622 to GO:0080023
  * Copied GO:0080023 to GO:0016836 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0080023
* Populated new object GO:0080024 (macro)
  * Changed name of GO:0080024 from "<new term>" to "indolebutyric acid metabolic process"
  * Set definition of GO:0080024 to "The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants."
  * Added definition dbxref PMID:18725356 to GO:0080024
  * Added synonym "IBA metabolic process" to GO:0080024
  * Changed synonym scope of GO:0080024 from "Related" to "Exact"
  * Added synonym "IBA metabolism" to GO:0080024
  * Changed synonym scope of GO:0080024 from "Related" to "Exact"
  * Added synonym "indole-3-butyric acid metabolic process" to GO:0080024
  * Changed synonym scope of GO:0080024 from "Related" to "Narrow"
  * Copied GO:0080024 to GO:0009850 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0080024
* Copied GO:0031286 to GO:0032108 with type OBO_REL:is_a
* Copied GO:0031286 to GO:0075262 with type OBO_REL:is_a
* Copied GO:0031287 to GO:0075261 with type OBO_REL:is_a
* Copied GO:0031287 to GO:0032109 with type OBO_REL:is_a
* Copied GO:0032803 to GO:0060255 with type OBO_REL:is_a
* Deleted GO:0032964 --OBO_REL:is_a--> GO:0006412
* Deleted GO:0032965 --OBO_REL:is_a--> GO:0006417
* Deleted GO:0032966 --OBO_REL:is_a--> GO:0017148
* Deleted GO:0045220 --OBO_REL:is_a--> GO:0045727
* Deleted GO:0045221 --OBO_REL:is_a--> GO:0017148
* Deleted GO:0045224 --OBO_REL:is_a--> GO:0045727
* Deleted GO:0045225 --OBO_REL:is_a--> GO:0017148
* Deleted GO:0045713 --OBO_REL:is_a--> GO:0006412
* Deleted GO:0045714 --OBO_REL:is_a--> GO:0006417
* Copied GO:0045714 to GO:0010556 with type OBO_REL:is_a
* Deleted GO:0045715 --OBO_REL:is_a--> GO:0017148
* Copied GO:0045715 to GO:0010558 with type OBO_REL:is_a
* Deleted GO:0045716 --OBO_REL:is_a--> GO:0045727
* Copied GO:0045716 to GO:0010557 with type OBO_REL:is_a
* Deleted GO:0048202 --part_of--> GO:0048203
* Deleted GO:0048202 --part_of--> GO:0048201
* Deleted GO:0048205 --part_of--> GO:0048204
* Deleted GO:0048205 --OBO_REL:is_a--> GO:0048220
* Deleted GO:0048205 --part_of--> GO:0048206
* Deleted GO:0048617 --part_of--> GO:0048613
* Deleted GO:0048618 --part_of--> GO:0048614
* Deleted GO:0048619 --part_of--> GO:0048613
* Deleted GO:0048620 --part_of--> GO:0048614
* Deleted GO:0048734 --part_of--> GO:0007453
* Deleted GO:0048734 --part_of--> GO:0007455
* Deleted GO:0048734 --part_of--> GO:0007454
* Deleted GO:0051177 --part_of--> GO:0007127
* Deleted GO:0051544 --OBO_REL:is_a--> GO:0045727
* Deleted GO:0051545 --OBO_REL:is_a--> GO:0017148
* Copied GO:0075005 to GO:0051701 with type OBO_REL:is_a
* Copied GO:0075006 to GO:0050793 with type OBO_REL:is_a
* Copied GO:0075007 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075008 to GO:0051093 with type OBO_REL:is_a
* Deleted GO:0075010 --OBO_REL:is_a--> GO:0075305
* Copied GO:0075010 to GO:0075006 with type OBO_REL:is_a
* Deleted GO:0075011 --OBO_REL:is_a--> GO:0075337
* Copied GO:0075011 to GO:0075007 with type OBO_REL:is_a
* Deleted GO:0075012 --OBO_REL:is_a--> GO:0075309
* Copied GO:0075012 to GO:0075008 with type OBO_REL:is_a
* Copied GO:0075017 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075018 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075019 to GO:0051093 with type OBO_REL:is_a
* Deleted GO:0075026 --OBO_REL:is_a--> GO:0050793
* Deleted GO:0075026 --OBO_REL:is_a--> GO:0075305
* Copied GO:0075026 to GO:0075017 with type OBO_REL:is_a
* Deleted GO:0075027 --OBO_REL:is_a--> GO:0075337
* Deleted GO:0075027 --OBO_REL:is_a--> GO:0051094
* Copied GO:0075027 to GO:0075018 with type OBO_REL:is_a
* Deleted GO:0075028 --OBO_REL:is_a--> GO:0075309
* Deleted GO:0075028 --OBO_REL:is_a--> GO:0051093
* Copied GO:0075028 to GO:0075019 with type OBO_REL:is_a
* Deleted GO:0075030 --OBO_REL:is_a--> GO:0075305
* Deleted GO:0075030 --OBO_REL:is_a--> GO:0050793
* Copied GO:0075030 to GO:0075026 with type OBO_REL:is_a
* Deleted GO:0075031 --OBO_REL:is_a--> GO:0051094
* Deleted GO:0075031 --OBO_REL:is_a--> GO:0075337
* Copied GO:0075031 to GO:0075027 with type OBO_REL:is_a
* Deleted GO:0075032 --OBO_REL:is_a--> GO:0051093
* Deleted GO:0075032 --OBO_REL:is_a--> GO:0075309
* Copied GO:0075032 to GO:0075028 with type OBO_REL:is_a
* Deleted GO:0075036 --OBO_REL:is_a--> GO:0075305
* Copied GO:0075036 to GO:0075017 with type OBO_REL:is_a
* Deleted GO:0075037 --OBO_REL:is_a--> GO:0075337
* Copied GO:0075037 to GO:0075018 with type OBO_REL:is_a
* Deleted GO:0075038 --OBO_REL:is_a--> GO:0075309
* Copied GO:0075038 to GO:0075019 with type OBO_REL:is_a
* Deleted GO:0075040 --OBO_REL:is_a--> GO:0075305
* Copied GO:0075040 to GO:0075036 with type OBO_REL:is_a
* Deleted GO:0075041 --OBO_REL:is_a--> GO:0075337
* Copied GO:0075041 to GO:0075018 with type OBO_REL:is_a
* Deleted GO:0075042 --OBO_REL:is_a--> GO:0075309
* Copied GO:0075042 to GO:0075038 with type OBO_REL:is_a
* Copied GO:0075045 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075046 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075047 to GO:0051093 with type OBO_REL:is_a
* Copied GO:0075049 to GO:0040012 with type OBO_REL:is_a
* Copied GO:0075049 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0075049 to GO:0051128 with type OBO_REL:is_a
* Copied GO:0075050 to GO:0051130 with type OBO_REL:is_a
* Copied GO:0075050 to GO:0040017 with type OBO_REL:is_a
* Copied GO:0075051 to GO:0040013 with type OBO_REL:is_a
* Copied GO:0075051 to GO:0051129 with type OBO_REL:is_a
* Copied GO:0075054 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075054 to GO:0075338 with type OBO_REL:is_a
* Copied GO:0075054 to GO:0040012 with type OBO_REL:is_a
* Copied GO:0075055 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075055 to GO:0040017 with type OBO_REL:is_a
* Copied GO:0075056 to GO:0040013 with type OBO_REL:is_a
* Copied GO:0075056 to GO:0051093 with type OBO_REL:is_a
* Deleted GO:0075058 --OBO_REL:is_a--> GO:0052372
* Copied GO:0075058 to GO:0075054 with type OBO_REL:is_a
* Deleted GO:0075059 --OBO_REL:is_a--> GO:0075294
* Copied GO:0075059 to GO:0075055 with type OBO_REL:is_a
* Deleted GO:0075060 --OBO_REL:is_a--> GO:0052374
* Copied GO:0075060 to GO:0075056 with type OBO_REL:is_a
* Copied GO:0075073 to GO:0051701 with type OBO_REL:is_a
* Copied GO:0075075 to GO:0045761 with type OBO_REL:is_a
* Copied GO:0075076 to GO:0045762 with type OBO_REL:is_a
* Copied GO:0075077 to GO:0007194 with type OBO_REL:is_a
* Copied GO:0075106 to GO:0045761 with type OBO_REL:is_a
* Copied GO:0075107 to GO:0045762 with type OBO_REL:is_a
* Copied GO:0075108 to GO:0007194 with type OBO_REL:is_a
* Deleted GO:0075184 --OBO_REL:is_a--> GO:0050793
* Copied GO:0075184 to GO:0043903 with type OBO_REL:is_a
* Copied GO:0075184 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075185 to GO:0043902 with type OBO_REL:is_a
* Copied GO:0075186 to GO:0043901 with type OBO_REL:is_a
* Deleted GO:0075188 --OBO_REL:is_a--> GO:0050793
* Copied GO:0075188 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075193 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075194 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075195 to GO:0051093 with type OBO_REL:is_a
* Copied GO:0075198 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075198 to GO:0075338 with type OBO_REL:is_a
* Copied GO:0075198 to GO:0040012 with type OBO_REL:is_a
* Copied GO:0075199 to GO:0040017 with type OBO_REL:is_a
* Copied GO:0075199 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075200 to GO:0051093 with type OBO_REL:is_a
* Copied GO:0075200 to GO:0040013 with type OBO_REL:is_a
* Copied GO:0075202 to GO:0075338 with type OBO_REL:is_a
* Copied GO:0075202 to GO:0040012 with type OBO_REL:is_a
* Copied GO:0075202 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075203 to GO:0040017 with type OBO_REL:is_a
* Copied GO:0075203 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075204 to GO:0051093 with type OBO_REL:is_a
* Copied GO:0075204 to GO:0040013 with type OBO_REL:is_a
* Copied GO:0075209 to GO:0009967 with type OBO_REL:is_a
* Copied GO:0075210 to GO:0009968 with type OBO_REL:is_a
* Deleted GO:0075227 --OBO_REL:is_a--> GO:0075305
* Copied GO:0075227 to GO:0075006 with type OBO_REL:is_a
* Deleted GO:0075228 --OBO_REL:is_a--> GO:0075337
* Copied GO:0075228 to GO:0075007 with type OBO_REL:is_a
* Deleted GO:0075229 --OBO_REL:is_a--> GO:0075309
* Copied GO:0075229 to GO:0075008 with type OBO_REL:is_a
* Copied GO:0075231 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0075232 to GO:0043902 with type OBO_REL:is_a
* Copied GO:0075233 to GO:0043901 with type OBO_REL:is_a
* Copied GO:0075260 to GO:0051239 with type OBO_REL:is_a
* Copied GO:0075261 to GO:0051240 with type OBO_REL:is_a
* Copied GO:0075262 to GO:0051241 with type OBO_REL:is_a
* Copied GO:0075296 to GO:0051781 with type OBO_REL:is_a
* Copied GO:0075297 to GO:0051782 with type OBO_REL:is_a
* Copied GO:0075306 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075307 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075308 to GO:0051093 with type OBO_REL:is_a
* Copied GO:0075322 to GO:0075310 with type OBO_REL:is_a
* Copied GO:0075323 to GO:0075311 with type OBO_REL:is_a
* Copied GO:0075324 to GO:0075312 with type OBO_REL:is_a
* Copied GO:0075329 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0075330 to GO:0051094 with type OBO_REL:is_a
* Copied GO:0075331 to GO:0051093 with type OBO_REL:is_a
* Copied GO:0075338 to GO:0044419 with type OBO_REL:is_a
* Copied GO:0075339 to GO:0043902 with type OBO_REL:is_a
* Copied GO:0075340 to GO:0043901 with type OBO_REL:is_a

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