[Go-diff] GO update 04/28/2009
Remote CVS for Gene Ontology
gocvs at genome.stanford.edu
Tue Apr 28 21:30:56 PDT 2009
OBODIFF of gene_ontology_write.obo version 1.567 by 1.576
Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0000968
* Created object of type obo:TERM with id GO:0000969
* Created object of type obo:TERM with id GO:0000970
* Created object of type obo:TERM with id GO:0000971
* Created object of type obo:TERM with id GO:0060560
* Created object of type obo:TERM with id GO:0060561
* Created object of type obo:TERM with id GO:0060562
* Created object of type obo:TERM with id GO:0070588
* Created object of type obo:TERM with id GO:0070589
* Created object of type obo:TERM with id GO:0070590
* Created object of type obo:TERM with id GO:0070591
* Created object of type obo:TERM with id GO:0070592
* Created object of type obo:TERM with id GO:0070593
* Created object of type obo:TERM with id GO:0070594
* Created object of type obo:TERM with id GO:0070595
* Created object of type obo:TERM with id GO:0070596
* Created object of type obo:TERM with id GO:0070597
* Created object of type obo:TERM with id GO:0070598
* Created object of type obo:TERM with id GO:0070599
* Created object of type obo:TERM with id GO:0070600
* Created object of type obo:TERM with id GO:0070601
* Created object of type obo:TERM with id GO:0070602
* Created object of type obo:TERM with id GO:0080120
* Created object of type obo:TERM with id GO:0080121
* Created object of type obo:TERM with id GO:0080122
* Created object of type obo:TERM with id GO:0080123
* Created object of type obo:TERM with id GO:0080124
* Created object of type obo:TERM with id GO:0080125
* Created object of type obo:TERM with id GO:0080126
* Created object of type obo:TERM with id GO:0080127
* Created object of type obo:TERM with id GO:0080128
* Created object of type obo:TERM with id ID:0000000
* Populated new object GO:0000968 (macro)
* Changed name of GO:0000968 from "<new term>" to "tRNA exon ligation"
* Set definition of GO:0000968 to "The process by which the two exons of a pre-tRNA which has had the intron removed are rejoined."
* Added definition dbxref GOC:krc to GO:0000968
* Copied GO:0000968 to GO:0006388 with type part_of
* Copied GO:0000968 to GO:0000378 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0000968
* Populated new object GO:0000969 (macro)
* Changed name of GO:0000969 from "<new term>" to "tRNA exon ligation utilizing ATP as source of linkage phosphate"
* Set definition of GO:0000969 to "The process by which the two exons of a pre-tRNA which has had the intron removed are rejoined where the splice junction phosphate is derived from exogenous ATP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in vertebrate species."
* Added definition dbxref GOC:krc to GO:0000969
* Added definition dbxref PMID:17786051 to GO:0000969
* Copied GO:0000969 to GO:0000968 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0000969
* Populated new object GO:0000970 (macro)
* Changed name of GO:0000970 from "<new term>" to "tRNA exon ligation utilizing GTP as source of linkage phosphate"
* Set definition of GO:0000970 to "The process by which the two exons of a pre-tRNA which has had the intron removed are rejoined where the splice junction phosphate is derived from exogenous GTP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in the yeast Saccharomyces cerevisiae where the ligation reaction also produces a 2'-phosphate at the splice junction which is subsequently removed as part of the ligation process."
* Added definition dbxref GOC:krc to GO:0000970
* Added definition dbxref PMID:18217203 to GO:0000970
* Added definition dbxref PMID:9299409 to GO:0000970
* Copied GO:0000970 to GO:0000968 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0000970
* Populated new object GO:0000971 (macro)
* Changed name of GO:0000971 from "<new term>" to "tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate"
* Set definition of GO:0000971 to "The process by which the two exons of a pre-tRNA which has had the intron removed are rejoined where the splice junction phosphate is derived from the 2',3' cyclic phosphate at the 3'-end of the 5'-exon. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in wheat, Chlamydomonas, and vertebrate species including humans."
* Added definition dbxref GOC:krc to GO:0000971
* Added definition dbxref PMID:17786051 to GO:0000971
* Added definition dbxref PMID:18217203 to GO:0000971
* Added definition dbxref PMID:9299409 to GO:0000971
* Copied GO:0000971 to GO:0000968 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0000971
* Populated new object GO:0060560 (macro)
* Changed name of GO:0060560 from "<new term>" to "developmental growth involved in morphogenesis"
* Set definition of GO:0060560 to "The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape."
* Added definition dbxref GOC:dph to GO:0060560
* Added synonym "differential growth" to GO:0060560
* Added general dbxref GOC:dph to synonym differential growth of GO:0060560
* Changed synonym scope of GO:0060560 from "Related" to "Exact"
* Copied GO:0060560 to GO:0009653 with type part_of
* Copied GO:0060560 to GO:0048589 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060560
* Populated new object GO:0060561 (macro)
* Changed name of GO:0060561 from "<new term>" to "apoptosis involved in morphogenesis"
* Set definition of GO:0060561 to "The process of apoptosis that contributes to the shaping of an anatomical structure."
* Added definition dbxref GOC:dph to GO:0060561
* Added synonym "morphogenetic apoptosis" to GO:0060561
* Added general dbxref GOC:dph to synonym morphogenetic apoptosis of GO:0060561
* Copied GO:0060561 to GO:0006915 with type OBO_REL:is_a
* Copied GO:0060561 to GO:0009653 with type part_of
* Assigned namespace "biological_process" to GO:0060561
* Populated new object GO:0060562 (macro)
* Changed name of GO:0060562 from "<new term>" to "epithelial tube morphogenesis"
* Set definition of GO:0060562 to "The process by which the anatomical structures of a tube are generated and organized from an epithelium. Morphogenesis pertains to the creation of form. Epithelial transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system."
* Added definition dbxref GOC:dph to GO:0060562
* Copied GO:0060562 to GO:0035239 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060562
* Populated new object GO:0070588 (macro)
* Changed name of GO:0070588 from "<new term>" to "transmembrane calcium ion transport"
* Set definition of GO:0070588 to "A process whereby a calcium ion is transported from one side of a membrane to the other."
* Added definition dbxref GOC:mah to GO:0070588
* Added GO:0070588 to category gosubset_prok
* Added synonym "transmembrane calcium transport" to GO:0070588
* Added general dbxref GOC:mah to synonym transmembrane calcium transport of GO:0070588
* Changed synonym scope of GO:0070588 from "Related" to "Exact"
* Copied GO:0070588 to GO:0006816 with type OBO_REL:is_a
* Copied GO:0070588 to GO:0034220 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070588
* Populated new object GO:0070589 (macro)
* Changed name of GO:0070589 from "<new term>" to "cellular component macromolecule biosynthetic process"
* Set definition of GO:0070589 to "The chemical reactions and pathways resulting in the formation of a macromolecule that is destined to form part of a specific cellular component."
* Added definition dbxref GOC:mah to GO:0070589
* Added synonym "cellular component macromolecule biosynthesis" to GO:0070589
* Added general dbxref GOC:mah to synonym cellular component macromolecule biosynthesis of GO:0070589
* Changed synonym scope of GO:0070589 from "Related" to "Exact"
* Copied GO:0070589 to GO:0034645 with type OBO_REL:is_a
* Copied GO:0070589 to GO:0044085 with type part_of
* Assigned namespace "biological_process" to GO:0070589
* Populated new object GO:0070590 (macro)
* Changed name of GO:0070590 from "<new term>" to "spore wall biogenesis"
* Set definition of GO:0070590 to "The process by which a spore wall is synthesized, aggregates, and bonds together. A spore wall is the specialized cell wall lying outside the cell membrane of a spore."
* Added definition dbxref GOC:mah to GO:0070590
* Copied GO:0070590 to GO:0030435 with type part_of
* Copied GO:0070590 to GO:0042546 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070590
* Populated new object GO:0070591 (macro)
* Changed name of GO:0070591 from "<new term>" to "ascospore wall biogenesis"
* Set definition of GO:0070591 to "The process by which an ascospore wall is synthesized, aggregates, and bonds together."
* Added definition dbxref GOC:mah to GO:0070591
* Copied GO:0070591 to GO:0030437 with type part_of
* Copied GO:0070591 to GO:0070590 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070591
* Populated new object GO:0070592 (macro)
* Changed name of GO:0070592 from "<new term>" to "cell wall polysaccharide biosynthetic process"
* Set definition of GO:0070592 to "The chemical reactions and pathways resulting in the formation of a polysaccharide destined to form part of a cell wall."
* Added definition dbxref GOC:mah to GO:0070592
* Added GO:0070592 to category gosubset_prok
* Added synonym "cell wall polysaccharide anabolism" to GO:0070592
* Added general dbxref GOC:mah to synonym cell wall polysaccharide anabolism of GO:0070592
* Changed synonym scope of GO:0070592 from "Related" to "Exact"
* Added synonym "cell wall polysaccharide biosynthesis" to GO:0070592
* Added general dbxref GOC:mah to synonym cell wall polysaccharide biosynthesis of GO:0070592
* Changed synonym scope of GO:0070592 from "Related" to "Exact"
* Added synonym "cell wall polysaccharide synthesis" to GO:0070592
* Added general dbxref GOC:mah to synonym cell wall polysaccharide synthesis of GO:0070592
* Changed synonym scope of GO:0070592 from "Related" to "Exact"
* Copied GO:0070592 to GO:0044038 with type OBO_REL:is_a
* Copied GO:0070592 to GO:0033692 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070592
* Populated new object GO:0070593 (macro)
* Changed name of GO:0070593 from "<new term>" to "dendrite self-avoidance"
* Set definition of GO:0070593 to "The process by which dendrites recognize and avoid contact with sister dendrites from the same cell."
* Added definition dbxref GOC:sart to GO:0070593
* Added definition dbxref PMID:17482551 to GO:0070593
* Added synonym "dendrite repulsion" to GO:0070593
* Added general dbxref GOC:sart to synonym dendrite repulsion of GO:0070593
* Changed synonym scope of GO:0070593 from "Related" to "Exact"
* Copied GO:0070593 to GO:0008038 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070593
* Populated new object GO:0070594 (macro)
* Changed name of GO:0070594 from "<new term>" to "juvenile hormone response element binding"
* Set definition of GO:0070594 to "Interacting selectively with the juvenile hormone response element (JHRE), a conserved sequence found in the promoters of genes whose expression is regulated in response to juvenile hormone."
* Added definition dbxref GOC:sart to GO:0070594
* Added definition dbxref PMID:17956872 to GO:0070594
* Added synonym "JHRE binding" to GO:0070594
* Added general dbxref GOC:mah to synonym JHRE binding of GO:0070594
* Changed synonym scope of GO:0070594 from "Related" to "Exact"
* Copied GO:0070594 to GO:0010843 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070594
* Populated new object GO:0070595 (macro)
* Changed name of GO:0070595 from "<new term>" to "1,3-alpha-glucan metabolic process"
* Set definition of GO:0070595 to "The chemical reactions and pathways involving alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds."
* Added definition dbxref GOC:mah to GO:0070595
* Added GO:0070595 to category gosubset_prok
* Added synonym "1,3-alpha-glucan metabolism" to GO:0070595
* Added general dbxref GOC:mah to synonym 1,3-alpha-glucan metabolism of GO:0070595
* Changed synonym scope of GO:0070595 from "Related" to "Exact"
* Added synonym "alpha-1,3 glucan metabolic process" to GO:0070595
* Added general dbxref GOC:mah to synonym alpha-1,3 glucan metabolic process of GO:0070595
* Changed synonym scope of GO:0070595 from "Related" to "Exact"
* Added synonym "alpha-1,3 glucan metabolism" to GO:0070595
* Added general dbxref GOC:mah to synonym alpha-1,3 glucan metabolism of GO:0070595
* Changed synonym scope of GO:0070595 from "Related" to "Exact"
* Copied GO:0070595 to GO:0030978 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070595
* Populated new object GO:0070596 (macro)
* Changed name of GO:0070596 from "<new term>" to "1,3-alpha-glucan biosynthetic process"
* Set definition of GO:0070596 to "The chemical reactions and pathways resulting in the formation of alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds."
* Added definition dbxref GOC:mah to GO:0070596
* Added synonym "1,3-alpha-glucan anabolism" to GO:0070596
* Added general dbxref GOC:mah to synonym 1,3-alpha-glucan anabolism of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "1,3-alpha-glucan biosynthesis" to GO:0070596
* Added general dbxref GOC:mah to synonym 1,3-alpha-glucan biosynthesis of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "1,3-alpha-glucan formation" to GO:0070596
* Added general dbxref GOC:mah to synonym 1,3-alpha-glucan formation of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "1,3-alpha-glucan synthesis" to GO:0070596
* Added general dbxref GOC:mah to synonym 1,3-alpha-glucan synthesis of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "alpha-1,3 glucan anabolism" to GO:0070596
* Added general dbxref GOC:mah to synonym alpha-1,3 glucan anabolism of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "alpha-1,3 glucan biosynthesis" to GO:0070596
* Added general dbxref GOC:mah to synonym alpha-1,3 glucan biosynthesis of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "alpha-1,3 glucan biosynthetic process" to GO:0070596
* Added general dbxref GOC:mah to synonym alpha-1,3 glucan biosynthetic process of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "alpha-1,3 glucan formation" to GO:0070596
* Added general dbxref GOC:mah to synonym alpha-1,3 glucan formation of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Added synonym "alpha-1,3 glucan synthesis" to GO:0070596
* Added general dbxref GOC:mah to synonym alpha-1,3 glucan synthesis of GO:0070596
* Changed synonym scope of GO:0070596 from "Related" to "Exact"
* Copied GO:0070596 to GO:0070595 with type OBO_REL:is_a
* Copied GO:0070596 to GO:0030979 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070596
* Populated new object GO:0070597 (macro)
* Changed name of GO:0070597 from "<new term>" to "cell wall 1,3-alpha-glucan metabolic process"
* Set definition of GO:0070597 to "The chemical reactions and pathways involving alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of cells."
* Added definition dbxref GOC:mah to GO:0070597
* Added GO:0070597 to category gosubset_prok
* Added synonym "cell wall 1,3-alpha-glucan metabolism" to GO:0070597
* Added general dbxref GOC:mah to synonym cell wall 1,3-alpha-glucan metabolism of GO:0070597
* Changed synonym scope of GO:0070597 from "Related" to "Exact"
* Added synonym "cell wall alpha-1,3 glucan metabolic process" to GO:0070597
* Added general dbxref GOC:mah to synonym cell wall alpha-1,3 glucan metabolic process of GO:0070597
* Changed synonym scope of GO:0070597 from "Related" to "Exact"
* Added synonym "cell wall alpha-1,3 glucan metabolism" to GO:0070597
* Added general dbxref GOC:mah to synonym cell wall alpha-1,3 glucan metabolism of GO:0070597
* Changed synonym scope of GO:0070597 from "Related" to "Exact"
* Copied GO:0070597 to GO:0070595 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070597
* Populated new object GO:0070598 (macro)
* Changed name of GO:0070598 from "<new term>" to "cell wall 1,3-alpha-glucan biosynthetic process"
* Set definition of GO:0070598 to "The chemical reactions and pathways resulting in the formation of 1,3-alpha-glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of cells."
* Added definition dbxref GOC:mah to GO:0070598
* Added GO:0070598 to category gosubset_prok
* Added synonym "cell wall 1,3-alpha-glucan anabolism" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall 1,3-alpha-glucan anabolism of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall 1,3-alpha-glucan biosynthesis" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall 1,3-alpha-glucan biosynthesis of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall 1,3-alpha-glucan formation" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall 1,3-alpha-glucan formation of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall 1,3-alpha-glucan synthesis" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall 1,3-alpha-glucan synthesis of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall alpha-1,3-glucan anabolism" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall alpha-1,3-glucan anabolism of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall alpha-1,3-glucan biosynthesis" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall alpha-1,3-glucan biosynthesis of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall alpha-1,3-glucan biosynthetic process" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall alpha-1,3-glucan biosynthetic process of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall alpha-1,3-glucan formation" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall alpha-1,3-glucan formation of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Added synonym "cell wall alpha-1,3-glucan synthesis" to GO:0070598
* Added general dbxref GOC:mah to synonym cell wall alpha-1,3-glucan synthesis of GO:0070598
* Changed synonym scope of GO:0070598 from "Related" to "Exact"
* Copied GO:0070598 to GO:0070597 with type OBO_REL:is_a
* Copied GO:0070598 to GO:0070592 with type OBO_REL:is_a
* Copied GO:0070598 to GO:0070596 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070598
* Populated new object GO:0070599 (macro)
* Changed name of GO:0070599 from "<new term>" to "fungal-type cell wall 1,3-alpha-glucan metabolic process"
* Set definition of GO:0070599 to "The chemical reactions and pathways involving alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of ascospores."
* Added definition dbxref GOC:mah to GO:0070599
* Added GO:0070599 to category gosubset_prok
* Added synonym "ascospore wall 1,3-alpha-glucan metabolism" to GO:0070599
* Added general dbxref GOC:mah to synonym ascospore wall 1,3-alpha-glucan metabolism of GO:0070599
* Changed synonym scope of GO:0070599 from "Related" to "Exact"
* Added synonym "ascospore wall alpha-1,3 glucan metabolic process" to GO:0070599
* Added general dbxref GOC:mah to synonym ascospore wall alpha-1,3 glucan metabolic process of GO:0070599
* Changed synonym scope of GO:0070599 from "Related" to "Exact"
* Added synonym "ascospore wall alpha-1,3 glucan metabolism" to GO:0070599
* Added general dbxref GOC:mah to synonym ascospore wall alpha-1,3 glucan metabolism of GO:0070599
* Changed synonym scope of GO:0070599 from "Related" to "Exact"
* Copied GO:0070599 to GO:0070597 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070599
* Populated new object GO:0070600 (macro)
* Changed name of GO:0070600 from "<new term>" to "fungal-type cell wall 1,3-alpha-glucan biosynthetic process"
* Set definition of GO:0070600 to "The chemical reactions and pathways resulting in the formation of 1,3-alpha-glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of ascospores."
* Added definition dbxref GOC:mah to GO:0070600
* Added GO:0070600 to category gosubset_prok
* Added synonym "fungal-type cell wall 1,3-alpha-glucan anabolism" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall 1,3-alpha-glucan anabolism of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall 1,3-alpha-glucan biosynthesis" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall 1,3-alpha-glucan biosynthesis of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall 1,3-alpha-glucan formation" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall 1,3-alpha-glucan formation of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall 1,3-alpha-glucan synthesis" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall 1,3-alpha-glucan synthesis of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall alpha-1,3-glucan anabolism" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall alpha-1,3-glucan anabolism of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall alpha-1,3-glucan biosynthesis" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall alpha-1,3-glucan biosynthesis of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall alpha-1,3-glucan biosynthetic process" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall alpha-1,3-glucan biosynthetic process of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall alpha-1,3-glucan formation" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall alpha-1,3-glucan formation of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Added synonym "fungal-type cell wall alpha-1,3-glucan synthesis" to GO:0070600
* Added general dbxref GOC:mah to synonym fungal-type cell wall alpha-1,3-glucan synthesis of GO:0070600
* Changed synonym scope of GO:0070600 from "Related" to "Exact"
* Copied GO:0070600 to GO:0070599 with type OBO_REL:is_a
* Copied GO:0070600 to GO:0070598 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070600
* Populated new object GO:0070601 (macro)
* Changed name of GO:0070601 from "<new term>" to "centromeric sister chromatid cohesion"
* Set definition of GO:0070601 to "The cell cycle process by which the sister chromatids of a replicated chromosome are joined along the length of the centromeric region of the chromosome."
* Added definition dbxref GOC:mah to GO:0070601
* Added synonym "sister chromatid cohesion at centromere" to GO:0070601
* Added general dbxref GOC:mah to synonym sister chromatid cohesion at centromere of GO:0070601
* Changed synonym scope of GO:0070601 from "Related" to "Exact"
* Copied GO:0070601 to GO:0007062 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070601
* Populated new object GO:0070602 (macro)
* Changed name of GO:0070602 from "<new term>" to "regulation of centromeric sister chromatid cohesion"
* Set definition of GO:0070602 to "Any process that modulates the frequency, rate or extent of sister chromatid cohesion in the centromeric region of a chromosome."
* Added definition dbxref GOC:mah to GO:0070602
* Added synonym "regulation of sister chromatid cohesion at centromere" to GO:0070602
* Added general dbxref GOC:mah to synonym regulation of sister chromatid cohesion at centromere of GO:0070602
* Changed synonym scope of GO:0070602 from "Related" to "Exact"
* Copied GO:0070602 to GO:0070601 with type regulates
* Copied GO:0070602 to GO:0007063 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070602
* Populated new object GO:0080120 (macro)
* Changed name of GO:0080120 from "<new term>" to "CAAX-box protein processing"
* Set definition of GO:0080120 to "A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three sequential, enzymatic, post-translational modifications essential to their targeting: First, the proteins are prenylated by one of two prenyltransferases called farnesyltransferase and geranylgeranyltransferase-I. Prenylation results in the covalent attachment of either farnesyl or geranylgeranyl isoprenoid moieties to the cysteine in the CAAX box motif. Prenylation is followed by proteolytic removal of the last three amino acids of the protein (AAX). Finally, the newly exposed carboxylate group of the isoprenylcysteine is methylated by an ER-associated prenyl-dependent carboxylmethyltransferase."
* Added definition dbxref PMID:12039957 to GO:0080120
* Added definition dbxref PMID:17114793 to GO:0080120
* Added definition dbxref PMID:18641086 to GO:0080120
* Added synonym "CAAX-box protein processing" to GO:0080120
* Changed synonym scope of GO:0080120 from "Related" to "Exact"
* Copied GO:0080120 to GO:0016485 with type OBO_REL:is_a
* Copied GO:0080120 to GO:0051605 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0080120
* Populated new object GO:0080121 (macro)
* Changed name of GO:0080121 from "<new term>" to "AMP transport"
* Set definition of GO:0080121 to "The directed movement of AMP, adenosine monophosphate, into, out of,
within or between cells."
* Added definition dbxref PMID:18923018 to GO:0080121
* Added synonym "adenosine monophosphate transport" to GO:0080121
* Changed synonym scope of GO:0080121 from "Related" to "Exact"
* Copied GO:0080121 to GO:0051503 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0080121
* Populated new object GO:0080122 (macro)
* Changed name of GO:0080122 from "<new term>" to "AMP transmembrane transporter activity"
* Set definition of GO:0080122 to "Catalysis of the transfer of AMP, adenosine monophosphate, from one side of a membrane to the other."
* Added definition dbxref PMID:18923018 to GO:0080122
* Added synonym "adenosine monophosphate transmembrane transporter activity" to GO:0080122
* Changed synonym scope of GO:0080122 from "Related" to "Exact"
* Copied GO:0080122 to GO:0000295 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0080122
* Populated new object GO:0080123 (macro)
* Changed name of GO:0080123 from "<new term>" to "jasmonate-amino synthetase activity"
* Set definition of GO:0080123 to "Catalysis of the reaction: jasmonate (JA) + an amino acid (including non-standard amino acids, such as ACC (1-aminocyclopropane-1-carboxylate)) = a jasmonyl-amino acid (amide-linked) conjugate."
* Added definition dbxref PMID:15258265 to GO:0080123
* Added definition dbxref PMID:17291501 to GO:0080123
* Added synonym "ja-amino synthetase activity" to GO:0080123
* Changed synonym scope of GO:0080123 from "Related" to "Exact"
* Added synonym "jasmonate-amido synthetase activity" to GO:0080123
* Changed synonym scope of GO:0080123 from "Related" to "Exact"
* Added synonym "jasmonate-amino acid conjugate synthetase activity" to GO:0080123
* Changed synonym scope of GO:0080123 from "Related" to "Exact"
* Added synonym "jasmonate-amino acid synthetase activity" to GO:0080123
* Changed synonym scope of GO:0080123 from "Related" to "Exact"
* Added synonym "jasmonate:amino acid synthetase activity" to GO:0080123
* Changed synonym scope of GO:0080123 from "Related" to "Exact"
* Added synonym "jasmonic acid-amino synthetase activity" to GO:0080123
* Changed synonym scope of GO:0080123 from "Related" to "Exact"
* Added synonym "jasmonyl-amino synthetase activity" to GO:0080123
* Changed synonym scope of GO:0080123 from "Related" to "Exact"
* Copied GO:0080123 to GO:0016881 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0080123
* Populated new object GO:0080124 (macro)
* Changed name of GO:0080124 from "<new term>" to "pheophytinase activity"
* Set definition of GO:0080124 to "Catalysis of the reaction: pheophytin + H2O = phytol + pheophorbide."
* Added definition dbxref PMID:19304936 to GO:0080124
* Added synonym "pheophytin pheophorbide hydrolase activity" to GO:0080124
* Changed synonym scope of GO:0080124 from "Related" to "Exact"
* Copied GO:0080124 to GO:0004091 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0080124
* Populated new object GO:0080125 (macro)
* Changed name of GO:0080125 from "<new term>" to "multicellular structure septum development"
* Set definition of GO:0080125 to "The process whose specific outcome is the progression of the multicellular structure septum over time, from its formation to the mature structure. The multicellular structure septum is the thin partition or membrane that divides a cavity or a mass of tissue."
* Added definition dbxref GOC:DHL to GO:0080125
* Copied GO:0080125 to GO:0009888 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0080125
* Populated new object GO:0080126 (macro)
* Changed name of GO:0080126 from "<new term>" to "ovary septum development"
* Set definition of GO:0080126 to "The process whose specific outcome is the progression of the ovary septum over time, from its formation to the mature structure. The ovary septum is the thin partition that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s)."
* Added definition dbxref PMID:17855426 to GO:0080126
* Copied GO:0080126 to GO:0080125 with type OBO_REL:is_a
* Copied GO:0080126 to GO:0048440 with type part_of
* Assigned namespace "biological_process" to GO:0080126
* Populated new object GO:0080127 (macro)
* Changed name of GO:0080127 from "<new term>" to "fruit septum development"
* Set definition of GO:0080127 to "The process whose specific outcome is the progression of the fruit septum over time, from its formation to the mature structure. The fruit septum is a thin partition or membrane that divides a cavity or a mass of tissue in the fruit."
* Added definition dbxref GOC:DHL to GO:0080127
* Added definition dbxref PO:0005008 to GO:0080127
* Copied GO:0080127 to GO:0080125 with type OBO_REL:is_a
* Copied GO:0080127 to GO:0010154 with type part_of
* Assigned namespace "biological_process" to GO:0080127
* Populated new object GO:0080128 (macro)
* Changed name of GO:0080128 from "<new term>" to "anther septum development"
* Set definition of GO:0080128 to "The process whose specific outcome is the progression of the anther septum over time, from its formation to the mature structure. The anther septum is a thin partition or stretch of cells that are present in the anther dehiscence zone."
* Added definition dbxref GOC:DHL to GO:0080128
* Added definition dbxref PO:0005010 to GO:0080128
* Copied GO:0080128 to GO:0080125 with type OBO_REL:is_a
* Copied GO:0080128 to GO:0048653 with type part_of
* Assigned namespace "biological_process" to GO:0080128
* Populated new object ID:0000000 (macro)
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 2e20ef
* Assigned namespace "biological_process" to ID:0000000
* Copied GO:0001658 to GO:0060562 with type OBO_REL:is_a
* Deleted GO:0001759 --OBO_REL:is_a--> GO:0010092
* Copied GO:0001759 to GO:0010092 with type positively_regulates
* Deleted GO:0001837 --OBO_REL:is_a--> GO:0051239
* Deleted GO:0001838 --OBO_REL:is_a--> GO:0035239
* Copied GO:0001838 to GO:0048646 with type OBO_REL:is_a
* Copied GO:0001838 to GO:0060562 with type part_of
* Deleted GO:0006038 --OBO_REL:is_a--> GO:0044038
* Copied GO:0006038 to GO:0070592 with type OBO_REL:is_a
* Copied GO:0006038 to GO:0009272 with type part_of
* Changed definition of GO:0006075 from "The chemical reactions and pathways resulting in the formation of beta-1,3 glucans." to "The chemical reactions and pathways resulting in the formation of beta-1,3 glucans, compounds composed of glucose residues linked by 1,3-beta-D-glucosidic bonds."
* Deleted GO:0006075 --OBO_REL:is_a--> GO:0051278
* Deleted GO:0006078 --OBO_REL:is_a--> GO:0051278
* Deleted GO:0008361 --OBO_REL:is_a--> GO:0022604
* Copied GO:0009252 to GO:0044038 with type OBO_REL:is_a
* Changed definition of GO:0009272 from "The chemical reactions and pathways resulting in the formation of the fungal-type cell wall. The fungal-type cell wall contains beta-glucan and may contain chitin." to "The process by which a fungal-type cell wall is synthesized, aggregates, and bonds together. The fungal-type cell wall contains beta-glucan and may contain chitin."
* Changed synonym scope of GO:0009272 from "Exact" to "Related"
* Changed synonym scope of GO:0009272 from "Exact" to "Related"
* Changed synonym scope of GO:0009272 from "Exact" to "Related"
* Changed synonym scope of GO:0009272 from "Exact" to "Related"
* Changed synonym scope of GO:0009272 from "Exact" to "Related"
* Changed synonym scope of GO:0009273 from "Exact" to "Related"
* Changed synonym scope of GO:0009273 from "Exact" to "Related"
* Changed synonym scope of GO:0009273 from "Exact" to "Related"
* Changed synonym scope of GO:0009273 from "Exact" to "Related"
* Changed synonym scope of GO:0009273 from "Exact" to "Related"
* Deleted GO:0010092 --part_of--> GO:0009887
* Copied GO:0010092 to GO:0048645 with type part_of
* Deleted GO:0010093 --part_of--> GO:0048444
* Copied GO:0010093 to GO:0048449 with type part_of
* Changed name of GO:0010382 from "cellular cell wall metabolic process" to "cellular cell wall macromolecule metabolic process"
* Changed definition of GO:0010382 from "The chemical reactions and pathways involving the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis, occurring at the level of the cell." to "The chemical reactions and pathways involving macromolecules forming, or destined to form, part of a cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis, occurring at the level of the cell."
* Added definition dbxref GOC:mah to GO:0010382
* Deleted synonym "cellular cell wall metabolism" from GO:0010382
* Added synonym "cellular cell wall macromolecule metabolism" to GO:0010382
* Changed synonym scope of GO:0010382 from "Related" to "Exact"
* Set definition of GO:0015266 to "Catalysis of energy-independent facilitated diffusion, mediated by passage of proteins through a transmembrane aqueous pore or channel."
* Added definition dbxref GOC:rb to GO:0015266
* Deleted GO:0016265 --OBO_REL:is_a--> GO:0032502
* Copied GO:0016265 to GO:0008150 with type OBO_REL:is_a
* Changed name of GO:0016998 from "cell wall catabolic process" to "cell wall macromolecule catabolic process"
* Changed definition of GO:0016998 from "The chemical reactions and pathways resulting in the breakdown of a cell wall." to "The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall."
* Added general dbxref GOC:mah to synonym cell wall breakdown of GO:0016998
* Changed synonym scope of GO:0016998 from "Exact" to "Related"
* Added general dbxref GOC:mah to synonym cell wall catabolism of GO:0016998
* Changed synonym scope of GO:0016998 from "Exact" to "Related"
* Added general dbxref GOC:mah to synonym cell wall degradation of GO:0016998
* Changed synonym scope of GO:0016998 from "Exact" to "Related"
* Changed definition of GO:0019416 from "The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as as electron acceptor." to "The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as an electron acceptor."
* Changed definition of GO:0019418 from "The chemical reactions and pathways resulting the conversion of of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate." to "The chemical reactions and pathways resulting in the conversion of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate."
* Deleted GO:0021906 --OBO_REL:is_a--> GO:0048646
* Copied GO:0021906 to GO:0048859 with type OBO_REL:is_a
* Copied GO:0021978 to GO:0021537 with type part_of
* Deleted GO:0030476 --part_of--> GO:0030437
* Copied GO:0030476 to GO:0070591 with type part_of
* Changed definition of GO:0030979 from "The chemical reactions and pathways resulting in the formation of alpha-glucans." to "The chemical reactions and pathways resulting in the formation of alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds."
* Deleted GO:0030979 --OBO_REL:is_a--> GO:0051278
* Changed name of GO:0032219 from "cell wall catabolic process during cytogamy" to "cell wall macromolecule catabolic process during cytogamy"
* Changed definition of GO:0032219 from "The chemical reactions and pathways resulting in the breakdown of a cell wall during cytogamy." to "The chemical reactions and pathways resulting in the breakdown of macromolecules forming part of a cell wall during cytogamy."
* Deleted GO:0032949 --OBO_REL:is_a--> GO:0032995
* Deleted GO:0032953 --OBO_REL:is_a--> GO:0032995
* Changed definition of GO:0032995 from "Any process that modulates the chemical reactions and pathways resulting in the formation of the fungal-type cell wall. The fungal-type cell wall contains beta-glucan and may contain chitin." to "Any process that modulates the process by which a cell wall is synthesized, aggregates, and bonds together. The fungal-type cell wall contains beta-glucan and may contain chitin."
* Added general dbxref GOC:mah to synonym regulation of chitin- and beta-glucan-containing cell wall biogenesis of GO:0032995
* Changed synonym scope of GO:0032995 from "Exact" to "Related"
* Deleted GO:0034217 --part_of--> GO:0030476
* Copied GO:0034217 to GO:0070591 with type part_of
* Deleted GO:0034223 --OBO_REL:is_a--> GO:0034307
* Changed definition of GO:0034294 from "The chemical reactions and pathways resulting in the formation of the specialized envelope lying outside the cell membrane of a spore derived from a product of meiosis." to "The aggregation, arrangement and bonding together of a set of components to form a sexual spore wall, the specialized envelope lying outside the cell membrane of a spore derived from a product of meiosis."
* Deleted synonym "ascospore wall 1,3-beta-glucan metabolism" from GO:0034409
* Deleted synonym "ascospore wall beta-1,3 glucan metabolic process" from GO:0034409
* Deleted synonym "ascospore wall beta-1,3 glucan metabolism" from GO:0034409
* Added synonym "fungal-type cell wall 1,3-beta-glucan metabolism" to GO:0034409
* Changed synonym scope of GO:0034409 from "Related" to "Exact"
* Added synonym "fungal-type cell wall beta-1,3 glucan metabolic process" to GO:0034409
* Changed synonym scope of GO:0034409 from "Related" to "Exact"
* Added synonym "fungal-type cell wall beta-1,3 glucan metabolism" to GO:0034409
* Changed synonym scope of GO:0034409 from "Related" to "Exact"
* Deleted GO:0034410 --OBO_REL:is_a--> GO:0044038
* Copied GO:0034410 to GO:0070592 with type OBO_REL:is_a
* Copied GO:0034411 to GO:0051278 with type OBO_REL:is_a
* Copied GO:0034412 to GO:0051278 with type OBO_REL:is_a
* Deleted GO:0035001 --OBO_REL:is_a--> GO:0048589
* Copied GO:0035001 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0035015 --OBO_REL:is_a--> GO:0048589
* Copied GO:0035015 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0035016 --OBO_REL:is_a--> GO:0048589
* Copied GO:0035016 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0035318 --OBO_REL:is_a--> GO:0070584
* Deleted GO:0035319 --OBO_REL:is_a--> GO:0070584
* Changed definition of GO:0042243 from "The chemical reactions and pathways resulting in the formation of the specialized envelope lying outside the cell membrane of a spore derived from a product of mitosis." to "The aggregation, arrangement and bonding together of a set of components to form an asexual spore wall, the specialized envelope lying outside the cell membrane of a spore derived from a product of mitosis."
* Changed definition of GO:0042244 from "The chemical reactions and pathways resulting in the formation of the specialized envelope lying outside the cell membrane of a spore." to "The aggregation, arrangement and bonding together of a set of components to form a spore wall; a spore wall is the specialized envelope lying outside the cell membrane of a spore."
* Deleted GO:0042244 --part_of--> GO:0030435
* Copied GO:0042244 to GO:0070590 with type part_of
* Changed name of GO:0044036 from "cell wall metabolic process" to "cell wall macromolecule metabolic process"
* Changed definition of GO:0044036 from "The chemical reactions and pathways involving the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis." to "The chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis."
* Added definition dbxref GOC:mah to GO:0044036
* Deleted GO:0044036 --OBO_REL:is_a--> GO:0008152
* Deleted GO:0044036 --part_of--> GO:0007047
* Copied GO:0044036 to GO:0043170 with type OBO_REL:is_a
* Changed name of GO:0044037 from "multi-organism cell wall metabolic process" to "multi-organism cell wall macromolecule metabolic process"
* Changed definition of GO:0044037 from "The chemical reactions and pathways involving the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis, involving more than one organism." to "The chemical reactions and pathways involving macromolecules forming, or destined to form, part of a cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis, involving more than one organism."
* Added definition dbxref GOC:mah to GO:0044037
* Deleted synonym "multi-organism cell wall metabolism" from GO:0044037
* Added synonym "multi-organism cell wall macromolecule metabolism" to GO:0044037
* Added general dbxref GOC:mah to synonym multi-organism cell wall macromolecule metabolism of GO:0044037
* Changed synonym scope of GO:0044037 from "Related" to "Exact"
* Changed name of GO:0044038 from "cell wall biosynthetic process" to "cell wall macromolecule biosynthetic process"
* Changed definition of GO:0044038 from "The chemical reactions and pathways resulting in the formation of a cell wall." to "The chemical reactions and pathways resulting in the formation of a macromolecule destined to form part of a cell wall."
* Deleted synonym "cell wall anabolism" from GO:0044038
* Deleted synonym "cell wall biosynthesis" from GO:0044038
* Deleted synonym "cell wall synthesis" from GO:0044038
* Added synonym "cell wall macromolecule anabolism" to GO:0044038
* Added general dbxref GOC:mah to synonym cell wall macromolecule anabolism of GO:0044038
* Changed synonym scope of GO:0044038 from "Related" to "Exact"
* Added synonym "cell wall macromolecule biosynthesis" to GO:0044038
* Added general dbxref GOC:mah to synonym cell wall macromolecule biosynthesis of GO:0044038
* Changed synonym scope of GO:0044038 from "Related" to "Exact"
* Added synonym "cell wall macromolecule synthesis" to GO:0044038
* Added general dbxref GOC:mah to synonym cell wall macromolecule synthesis of GO:0044038
* Changed synonym scope of GO:0044038 from "Related" to "Exact"
* Deleted GO:0044038 --OBO_REL:is_a--> GO:0044249
* Copied GO:0044038 to GO:0070589 with type OBO_REL:is_a
* Changed name of GO:0044039 from "cellular cell wall catabolic process" to "cellular cell wall macromolecule catabolic process"
* Changed definition of GO:0044039 from "The chemical reactions and pathways resulting in the breakdown of a cell wall, occurring at the level of the cell." to "The chemical reactions and pathways resulting in the breakdown of macromolecules forming part of a cell wall, occurring at the level of the cell."
* Deleted synonym "cellular cell wall breakdown" from GO:0044039
* Deleted synonym "cellular cell wall catabolism" from GO:0044039
* Deleted synonym "cellular cell wall degradation" from GO:0044039
* Added synonym "cellular cell wall macromolecule breakdown" to GO:0044039
* Added general dbxref GOC:mah to synonym cellular cell wall macromolecule breakdown of GO:0044039
* Changed synonym scope of GO:0044039 from "Related" to "Exact"
* Added synonym "cellular cell wall macromolecule catabolism" to GO:0044039
* Added general dbxref GOC:mah to synonym cellular cell wall macromolecule catabolism of GO:0044039
* Changed synonym scope of GO:0044039 from "Related" to "Exact"
* Added synonym "cellular cell wall macromolecule degradation" to GO:0044039
* Added general dbxref GOC:mah to synonym cellular cell wall macromolecule degradation of GO:0044039
* Changed synonym scope of GO:0044039 from "Related" to "Exact"
* Deleted GO:0045492 --OBO_REL:is_a--> GO:0033692
* Deleted GO:0045492 --OBO_REL:is_a--> GO:0044038
* Copied GO:0045492 to GO:0070592 with type OBO_REL:is_a
* Deleted GO:0048449 --OBO_REL:is_a--> GO:0048444
* Copied GO:0048449 to GO:0048444 with type part_of
* Deleted GO:0048526 --OBO_REL:is_a--> GO:0048589
* Copied GO:0048526 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0048812 --OBO_REL:is_a--> GO:0070584
* Changed definition of GO:0051101 from "Any process that modulates the frequency, rate or extent of DNA binding. DNA binding is any process by which a gene product interacts selectively with DNA (deoxyribonucleic acid)." to "Any process that modulates the frequency, rate or extent of DNA binding. DNA binding is any process by which a gene product interacts selectively with DNA (deoxyribonucleic acid)."
* Deleted GO:0051278 --OBO_REL:is_a--> GO:0033692
* Copied GO:0051278 to GO:0070592 with type OBO_REL:is_a
* Deleted GO:0052324 --OBO_REL:is_a--> GO:0044038
* Copied GO:0052324 to GO:0070592 with type OBO_REL:is_a
* Copied GO:0052324 to GO:0009832 with type part_of
* Deleted GO:0052325 --OBO_REL:is_a--> GO:0044038
* Copied GO:0052325 to GO:0070592 with type OBO_REL:is_a
* Copied GO:0052325 to GO:0009832 with type part_of
* Changed definition of GO:0055087 from "A protein complex that regulates RNA degradation by the exosome complex. In Saccharomyces the complex has a heterotetrameric stoichiometry consisting of one copy of Ski2p and Ski3. and two copies of Ski8p." to "A protein complex that regulates RNA degradation by the exosome complex. In Saccharomyces the complex has a heterotetrameric stoichiometry consisting of one copy each of Ski2p and Ski3 and two copies of Ski8p."
* Deleted GO:0060057 --OBO_REL:is_a--> GO:0006915
* Copied GO:0060057 to GO:0060561 with type OBO_REL:is_a
* Deleted GO:0060186 --OBO_REL:is_a--> GO:0048589
* Copied GO:0060186 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0060271 --OBO_REL:is_a--> GO:0070584
* Deleted GO:0060424 --part_of--> GO:0060425
* Copied GO:0060424 to GO:0060431 with type part_of
* Copied GO:0060441 to GO:0060562 with type OBO_REL:is_a
* Copied GO:0060446 to GO:0060562 with type OBO_REL:is_a
* Deleted GO:0060447 --OBO_REL:is_a--> GO:0048589
* Copied GO:0060447 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0060449 --OBO_REL:is_a--> GO:0048589
* Copied GO:0060449 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0060492 --part_of--> GO:0060431
* Copied GO:0060492 to GO:0060424 with type positively_regulates
* Deleted GO:0060503 --OBO_REL:is_a--> GO:0048589
* Copied GO:0060503 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0060514 --part_of--> GO:0060513
* Copied GO:0060514 to GO:0060515 with type positively_regulates
* Deleted GO:0060515 --part_of--> GO:0060512
* Copied GO:0060515 to GO:0060513 with type part_of
* Deleted GO:0060516 --OBO_REL:is_a--> GO:0048589
* Copied GO:0060516 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0060520 --part_of--> GO:0060515
* Copied GO:0060520 to GO:0060514 with type positively_regulates
* Deleted GO:0060523 --OBO_REL:is_a--> GO:0048589
* Copied GO:0060523 to GO:0060560 with type OBO_REL:is_a
* Deleted GO:0070136 --OBO_REL:is_a--> GO:0044038
* Changed definition of GO:0070225 from "Catalysis of the reaction: hydrogen sulfide + oxidized cytochrome c = S0 + reduced cytochrome c" to "Catalysis of the reaction: hydrogen sulfide + oxidized cytochrome c = S0 + reduced cytochrome c."
* Changed definition of GO:0070469 from "The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes).The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient." to "The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient."
* Changed definition of GO:0070479 from "The chemical reactions and pathways resulting in the breakdown of the nuclear-transcribed mRNA transcript body of an mRNA in which an amino-acid codon has changed to a nonsense codon; occurs when the 5' end is not protected by a 5'-cap; degradation proceeds in the 5' to 3' direction.'" to "The chemical reactions and pathways resulting in the breakdown of the nuclear-transcribed mRNA transcript body of an mRNA in which an amino-acid codon has changed to a nonsense codon; occurs when the 5' end is not protected by a 5'-cap; degradation proceeds in the 5' to 3' direction."
* Changed definition of GO:0070550 from "The cell cycle process whereby the chromatin structure of the rDNA repeats is compacted. In S. cerevisiae, condensation and resolution of the rDNA occurs during anaphasep" to "The cell cycle process whereby the chromatin structure of the rDNA repeats is compacted. In S. cerevisiae, condensation and resolution of the rDNA occurs during anaphase."
* Changed definition of GO:0070586 from "The attachment of one cell to another cell affecting
gastrulation." to "The attachment of one cell to another cell affecting gastrulation."
* Changed definition of GO:0080061 from "Catalysis of the reaction: indole-3-acetonitrile (IAN) + 2H2O = indole-3-acetic acid (IAA) + NH3" to "Catalysis of the reaction: indole-3-acetonitrile (IAN) + 2H2O = indole-3-acetic acid (IAA) + NH3."
* Changed definition of GO:0080096 from "Catalysis of the reaction: a phosphatidate + a sterol = a sterol
ester + a lysophosphatidate." to "Catalysis of the reaction: a phosphatidate + a sterol = a sterol ester + a lysophosphatidate."
* Changed comment from "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 (See BRENDA: http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.28; note: 3-indole-2-oxopropanoate = indolepyruvate)." to "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 (See BRENDA:http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.28; note: 3-indole-2-oxopropanoate = indolepyruvate)."
* Changed comment from "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 and several other EC numbers (See BRENDA: http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.44)." to "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 and several other EC numbers (See BRENDA:http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.44)."
* Changed comment from "This reaction falls within the larger set of reactions associated with EC 2.6.1.5 (See BRENDA: http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.5)." to "This reaction falls within the larger set of reactions associated with EC 2.6.1.5 (See BRENDA:http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.5)."
* Added comment "This reaction falls within the larger set of reactions associated with EC 2.6.1.50 (See BRENDA:http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.50)."
* Changed definition of GO:0080100 from "Catalysis of the reaction: L-glutamine + 2-oxoglutarate = 2-oxoglutaramate + L-glutamate. This reaction falls within the larger set of reactions associated with EC 2.6.1.50 (See BRENDA: http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.50)." to "Catalysis of the reaction: L-glutamine + 2-oxoglutarate = 2-oxoglutaramate + L-glutamate."
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