[Go-diff] GO update 04/29/2009
Remote CVS for Gene Ontology
gocvs at genome.stanford.edu
Wed Apr 29 21:30:56 PDT 2009
OBODIFF of gene_ontology_write.obo version 1.576 by 1.581
Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0060563
* Created object of type obo:TERM with id GO:0060564
* Created object of type obo:TERM with id GO:0060565
* Created object of type obo:TERM with id GO:0060566
* Created object of type obo:TERM with id GO:0060567
* Created object of type obo:TERM with id GO:0060568
* Created object of type obo:TERM with id GO:0060569
* Created object of type obo:TERM with id GO:0060570
* Created object of type obo:TERM with id GO:0070603
* Created object of type obo:TERM with id GO:0070604
* Created object of type obo:TERM with id GO:0070605
* Created object of type obo:TERM with id GO:0070606
* Created object of type obo:TERM with id GO:0070607
* Created object of type obo:TERM with id GO:0070608
* Created object of type obo:TERM with id GO:0070609
* Created object of type obo:TERM with id GO:0070610
* Created object of type obo:TERM with id GO:0070611
* Created object of type obo:TERM with id GO:0070612
* Created object of type obo:TERM with id GO:0070613
* Created object of type obo:TERM with id GO:0070614
* Created object of type obo:TERM with id GO:0070615
* Created object of type obo:TERM with id GO:0070616
* Created object of type obo:TERM with id GO:0070617
* Created object of type obo:TERM with id GO:0070618
* Created object of type obo:TERM with id GO:0070619
* Created object of type obo:TERM with id GO:0070620
* Created object of type obo:TERM with id GO:0070621
* Created object of type obo:TERM with id GO:0070622
* Created object of type obo:TERM with id GO:0080129
* Created object of type obo:TERM with id GO:0080130
* Created object of type obo:TERM with id GO:0080131
* Populated new object GO:0060563 (macro)
* Changed name of GO:0060563 from "<new term>" to "neuroepithelial cell differentiation"
* Set definition of GO:0060563 to "The process by which epiblast cells acquire specialized features of neuroepithelial cells."
* Added definition dbxref GOC:dph to GO:0060563
* Added definition dbxref GOC:tb to GO:0060563
* Copied GO:0060563 to GO:0030154 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060563
* Populated new object GO:0060564 (macro)
* Changed name of GO:0060564 from "<new term>" to "negative regulation of anaphase-promoting complex activity during mitotic cell cycle"
* Set definition of GO:0060564 to "Any process that decreases the rate frequency or extent of anaphase-promoting complex activity regulating the mitotic cell cycle."
* Added definition dbxref GOC:dph to GO:0060564
* Added definition dbxref GOC:tb to GO:0060564
* Added synonym "<new synonym>" to GO:0060564
* Added synonym "negative regulation of APC activity during mitotic cell cycle" to GO:0060564
* Added general dbxref GOC:tb to synonym negative regulation of APC activity during mitotic cell cycle of GO:0060564
* Added general dbxref GOC:dph to synonym negative regulation of APC activity during mitotic cell cycle of GO:0060564
* Added synonym "negative regulation of APC/C activity during mitotic cell cycle" to GO:0060564
* Added general dbxref GOC:tb to synonym negative regulation of APC/C activity during mitotic cell cycle of GO:0060564
* Added general dbxref GOC:dph to synonym negative regulation of APC/C activity during mitotic cell cycle of GO:0060564
* Changed synonym scope of GO:0060564 from "Related" to "Exact"
* Added synonym "negative regulation of cyclosome activity during mitotic cell cycle" to GO:0060564
* Added general dbxref GOC:tb to synonym negative regulation of cyclosome activity during mitotic cell cycle of GO:0060564
* Added general dbxref GOC:dph to synonym negative regulation of cyclosome activity during mitotic cell cycle of GO:0060564
* Changed synonym scope of GO:0060564 from "Related" to "Exact"
* Copied GO:0060564 to GO:0051436 with type OBO_REL:is_a
* Copied GO:0060564 to GO:0031145 with type negatively_regulates
* Copied GO:0060564 to GO:0045841 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060564
* Populated new object GO:0060565 (macro)
* Changed name of GO:0060565 from "<new term>" to "inhibition of anaphase-promoting complex activity during mitotic cell cycle"
* Set definition of GO:0060565 to "Any process that prevents the activation of anaphase-promoting complex activity regulating the mitotic cell cycle."
* Added definition dbxref GOC:dph to GO:0060565
* Added definition dbxref GOC:tb to GO:0060565
* Added synonym "inhibition of APC activity during mitotic cell cycle" to GO:0060565
* Added general dbxref GOC:tb to synonym inhibition of APC activity during mitotic cell cycle of GO:0060565
* Added general dbxref GOC:dph to synonym inhibition of APC activity during mitotic cell cycle of GO:0060565
* Changed synonym scope of GO:0060565 from "Related" to "Exact"
* Added synonym "inhibition of APC/C activity during mitotic cell cycle" to GO:0060565
* Added general dbxref GOC:tb to synonym inhibition of APC/C activity during mitotic cell cycle of GO:0060565
* Added general dbxref GOC:dph to synonym inhibition of APC/C activity during mitotic cell cycle of GO:0060565
* Changed synonym scope of GO:0060565 from "Related" to "Exact"
* Added synonym "inhibition of cyclosome activity during mitotic cell cycle" to GO:0060565
* Added general dbxref GOC:tb to synonym inhibition of cyclosome activity during mitotic cell cycle of GO:0060565
* Added general dbxref GOC:dph to synonym inhibition of cyclosome activity during mitotic cell cycle of GO:0060565
* Copied GO:0060565 to GO:0060564 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060565
* Populated new object GO:0060566 (macro)
* Changed name of GO:0060566 from "<new term>" to "positive regulation of transcription termination"
* Set definition of GO:0060566 to "Any process that increases the rate, frequency or extent of transcription termination. Transcription termination is the process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA."
* Added definition dbxref GOC:dph to GO:0060566
* Added definition dbxref GOC:tb to GO:0060566
* Copied GO:0060566 to GO:0031554 with type OBO_REL:is_a
* Copied GO:0060566 to GO:0045893 with type OBO_REL:is_a
* Copied GO:0060566 to GO:0043243 with type OBO_REL:is_a
* Copied GO:0060566 to GO:0006353 with type positively_regulates
* Assigned namespace "biological_process" to GO:0060566
* Populated new object GO:0060567 (macro)
* Changed name of GO:0060567 from "<new term>" to "negative regulation of transcription termination"
* Set definition of GO:0060567 to "Any process that decreases the rate, frequency or extent of transcription termination. Transcription termination is the process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA."
* Added definition dbxref GOC:dph to GO:0060567
* Added definition dbxref GOC:tb to GO:0060567
* Copied GO:0060567 to GO:0043242 with type OBO_REL:is_a
* Copied GO:0060567 to GO:0006353 with type negatively_regulates
* Copied GO:0060567 to GO:0031554 with type OBO_REL:is_a
* Copied GO:0060567 to GO:0045892 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060567
* Populated new object GO:0060568 (macro)
* Changed name of GO:0060568 from "<new term>" to "regulation of peptide hormone processing"
* Set definition of GO:0060568 to "Any process that modulates the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone."
* Added definition dbxref GOC:dph to GO:0060568
* Added definition dbxref GOC:tb to GO:0060568
* Copied GO:0060568 to GO:0070613 with type OBO_REL:is_a
* Copied GO:0060568 to GO:0032350 with type OBO_REL:is_a
* Copied GO:0060568 to GO:0016486 with type regulates
* Assigned namespace "biological_process" to GO:0060568
* Populated new object GO:0060569 (macro)
* Changed name of GO:0060569 from "<new term>" to "positive regulation of peptide hormone processing"
* Set definition of GO:0060569 to "Any process that increases the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone."
* Added definition dbxref GOC:dph to GO:0060569
* Added definition dbxref GOC:tb to GO:0060569
* Copied GO:0060569 to GO:0032352 with type OBO_REL:is_a
* Copied GO:0060569 to GO:0060568 with type OBO_REL:is_a
* Copied GO:0060569 to GO:0016486 with type positively_regulates
* Assigned namespace "biological_process" to GO:0060569
* Populated new object GO:0060570 (macro)
* Changed name of GO:0060570 from "<new term>" to "negative regulation of peptide hormone processing"
* Set definition of GO:0060570 to "Any process that decreases the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone."
* Added definition dbxref GOC:dph to GO:0060570
* Added definition dbxref GOC:tb to GO:0060570
* Copied GO:0060570 to GO:0032351 with type OBO_REL:is_a
* Copied GO:0060570 to GO:0060568 with type OBO_REL:is_a
* Copied GO:0060570 to GO:0016486 with type negatively_regulates
* Assigned namespace "biological_process" to GO:0060570
* Populated new object GO:0070603 (macro)
* Changed name of GO:0070603 from "<new term>" to "SWI/SNF-type complex"
* Set definition of GO:0070603 to "A chromatin remodeling complex that contains an ortholog of the Sacccharomyces ATPase Swi2/Snf2 as one of the core components."
* Added definition dbxref GOC:mah to GO:0070603
* Added definition dbxref PMID:0 to GO:0070603
* Added synonym "SWI-SNF-type complex" to GO:0070603
* Added general dbxref GOC:mah to synonym SWI-SNF-type complex of GO:0070603
* Changed synonym scope of GO:0070603 from "Related" to "Exact"
* Copied GO:0070603 to GO:0016585 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070603
* Populated new object GO:0070604 (macro)
* Changed name of GO:0070604 from "<new term>" to "PBAF complex"
* Set definition of GO:0070604 to "A SWI/SNF-type complex that contains the ATPase product of the mammalian BAF180 gene."
* Added definition dbxref GOC:mah to GO:0070604
* Added definition dbxref PMID:16155938 to GO:0070604
* Added definition dbxref PMID:8895581 to GO:0070604
* Added synonym "Polybromo- and BAF containing complex" to GO:0070604
* Added general dbxref CORUM:565 to synonym Polybromo- and BAF containing complex of GO:0070604
* Changed synonym scope of GO:0070604 from "Related" to "Exact"
* Added synonym "SWI/SNF complex B" to GO:0070604
* Added general dbxref CORUM:565 to synonym SWI/SNF complex B of GO:0070604
* Changed synonym scope of GO:0070604 from "Related" to "Exact"
* Copied GO:0070604 to GO:0070603 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070604
* Populated new object GO:0070605 (macro)
* Changed name of GO:0070605 from "<new term>" to "regulation of 1,3-alpha-glucan metabolic process"
* Set definition of GO:0070605 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds."
* Added definition dbxref GOC:mah to GO:0070605
* Added GO:0070605 to category gosubset_prok
* Added synonym "regulation of 1,3-alpha-glucan metabolism" to GO:0070605
* Added general dbxref GOC:mah to synonym regulation of 1,3-alpha-glucan metabolism of GO:0070605
* Changed synonym scope of GO:0070605 from "Related" to "Exact"
* Added synonym "regulation of alpha-1,3 glucan metabolic process" to GO:0070605
* Added general dbxref GOC:mah to synonym regulation of alpha-1,3 glucan metabolic process of GO:0070605
* Changed synonym scope of GO:0070605 from "Related" to "Exact"
* Added synonym "regulation of alpha-1,3 glucan metabolism" to GO:0070605
* Added general dbxref GOC:mah to synonym regulation of alpha-1,3 glucan metabolism of GO:0070605
* Changed synonym scope of GO:0070605 from "Related" to "Exact"
* Copied GO:0070605 to GO:0032948 with type OBO_REL:is_a
* Copied GO:0070605 to GO:0070595 with type regulates
* Assigned namespace "biological_process" to GO:0070605
* Populated new object GO:0070606 (macro)
* Changed name of GO:0070606 from "<new term>" to "regulation of 1,3-alpha-glucan biosynthetic process"
* Set definition of GO:0070606 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds."
* Added definition dbxref GOC:mah to GO:0070606
* Added synonym "regulation of 1,3-alpha-glucan anabolism" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of 1,3-alpha-glucan anabolism of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of 1,3-alpha-glucan biosynthesis" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of 1,3-alpha-glucan biosynthesis of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of 1,3-alpha-glucan formation" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of 1,3-alpha-glucan formation of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of 1,3-alpha-glucan synthesis" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of 1,3-alpha-glucan synthesis of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of alpha-1,3 glucan anabolism" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of alpha-1,3 glucan anabolism of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of alpha-1,3 glucan biosynthesis" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of alpha-1,3 glucan biosynthesis of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of alpha-1,3 glucan biosynthetic process" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of alpha-1,3 glucan biosynthetic process of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of alpha-1,3 glucan formation" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of alpha-1,3 glucan formation of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Added synonym "regulation of alpha-1,3 glucan synthesis" to GO:0070606
* Added general dbxref GOC:mah to synonym regulation of alpha-1,3 glucan synthesis of GO:0070606
* Changed synonym scope of GO:0070606 from "Related" to "Exact"
* Copied GO:0070606 to GO:0070605 with type OBO_REL:is_a
* Copied GO:0070606 to GO:0032949 with type OBO_REL:is_a
* Copied GO:0070606 to GO:0070596 with type regulates
* Assigned namespace "biological_process" to GO:0070606
* Populated new object GO:0070607 (macro)
* Changed name of GO:0070607 from "<new term>" to "regulation of cell wall 1,3-alpha-glucan metabolic process"
* Set definition of GO:0070607 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of cells."
* Added definition dbxref GOC:mah to GO:0070607
* Added GO:0070607 to category gosubset_prok
* Added synonym "regulation of cell wall 1,3-alpha-glucan metabolism" to GO:0070607
* Added general dbxref GOC:mah to synonym regulation of cell wall 1,3-alpha-glucan metabolism of GO:0070607
* Changed synonym scope of GO:0070607 from "Related" to "Exact"
* Added synonym "regulation of cell wall alpha-1,3 glucan metabolic process" to GO:0070607
* Added general dbxref GOC:mah to synonym regulation of cell wall alpha-1,3 glucan metabolic process of GO:0070607
* Changed synonym scope of GO:0070607 from "Related" to "Exact"
* Added synonym "regulation of cell wall alpha-1,3 glucan metabolism" to GO:0070607
* Added general dbxref GOC:mah to synonym regulation of cell wall alpha-1,3 glucan metabolism of GO:0070607
* Changed synonym scope of GO:0070607 from "Related" to "Exact"
* Copied GO:0070607 to GO:0070597 with type regulates
* Copied GO:0070607 to GO:0070605 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070607
* Populated new object GO:0070608 (macro)
* Changed name of GO:0070608 from "<new term>" to "regulation of cell wall 1,3-alpha-glucan biosynthetic process"
* Set definition of GO:0070608 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of 1,3-alpha-glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of cells."
* Added definition dbxref GOC:mah to GO:0070608
* Added GO:0070608 to category gosubset_prok
* Added synonym "regulation of cell wall 1,3-alpha-glucan anabolism" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall 1,3-alpha-glucan anabolism of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall 1,3-alpha-glucan biosynthesis" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall 1,3-alpha-glucan biosynthesis of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall 1,3-alpha-glucan formation" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall 1,3-alpha-glucan formation of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall 1,3-alpha-glucan synthesis" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall 1,3-alpha-glucan synthesis of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall alpha-1,3-glucan anabolism" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall alpha-1,3-glucan anabolism of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall alpha-1,3-glucan biosynthesis" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall alpha-1,3-glucan biosynthesis of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall alpha-1,3-glucan biosynthetic process" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall alpha-1,3-glucan biosynthetic process of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall alpha-1,3-glucan formation" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall alpha-1,3-glucan formation of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Added synonym "regulation of cell wall alpha-1,3-glucan synthesis" to GO:0070608
* Added general dbxref GOC:mah to synonym regulation of cell wall alpha-1,3-glucan synthesis of GO:0070608
* Changed synonym scope of GO:0070608 from "Related" to "Exact"
* Copied GO:0070608 to GO:0070598 with type regulates
* Copied GO:0070608 to GO:0070607 with type OBO_REL:is_a
* Copied GO:0070608 to GO:0070606 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070608
* Populated new object GO:0070609 (macro)
* Changed name of GO:0070609 from "<new term>" to "regulation of fungal-type cell wall 1,3-alpha-glucan metabolic process"
* Set definition of GO:0070609 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving alpha-1,3 glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of ascospores."
* Added definition dbxref GOC:mah to GO:0070609
* Added GO:0070609 to category gosubset_prok
* Added synonym "regulation of ascospore wall 1,3-alpha-glucan metabolism" to GO:0070609
* Added general dbxref GOC:mah to synonym regulation of ascospore wall 1,3-alpha-glucan metabolism of GO:0070609
* Changed synonym scope of GO:0070609 from "Related" to "Exact"
* Added synonym "regulation of ascospore wall alpha-1,3 glucan metabolic process" to GO:0070609
* Added general dbxref GOC:mah to synonym regulation of ascospore wall alpha-1,3 glucan metabolic process of GO:0070609
* Changed synonym scope of GO:0070609 from "Related" to "Exact"
* Added synonym "regulation of ascospore wall alpha-1,3 glucan metabolism" to GO:0070609
* Added general dbxref GOC:mah to synonym regulation of ascospore wall alpha-1,3 glucan metabolism of GO:0070609
* Changed synonym scope of GO:0070609 from "Related" to "Exact"
* Copied GO:0070609 to GO:0070607 with type OBO_REL:is_a
* Copied GO:0070609 to GO:0070599 with type regulates
* Assigned namespace "biological_process" to GO:0070609
* Populated new object GO:0070610 (macro)
* Changed name of GO:0070610 from "<new term>" to "regulation of fungal-type cell wall 1,3-alpha-glucan biosynthetic process"
* Set definition of GO:0070610 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of 1,3-alpha-glucans, compounds composed of glucose residues linked by 1,3-alpha-D-glucosidic bonds, found in the walls of ascospores."
* Added definition dbxref GOC:mah to GO:0070610
* Added GO:0070610 to category gosubset_prok
* Added synonym "regulation of fungal-type cell wall 1,3-alpha-glucan anabolism" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall 1,3-alpha-glucan anabolism of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall 1,3-alpha-glucan biosynthesis" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall 1,3-alpha-glucan biosynthesis of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall 1,3-alpha-glucan formation" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall 1,3-alpha-glucan formation of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall 1,3-alpha-glucan synthesis" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall 1,3-alpha-glucan synthesis of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall alpha-1,3-glucan anabolism" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall alpha-1,3-glucan anabolism of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall alpha-1,3-glucan biosynthesis" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall alpha-1,3-glucan biosynthesis of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall alpha-1,3-glucan biosynthetic process" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall alpha-1,3-glucan biosynthetic process of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall alpha-1,3-glucan formation" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall alpha-1,3-glucan formation of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Added synonym "regulation of fungal-type cell wall alpha-1,3-glucan synthesis" to GO:0070610
* Added general dbxref GOC:mah to synonym regulation of fungal-type cell wall alpha-1,3-glucan synthesis of GO:0070610
* Changed synonym scope of GO:0070610 from "Related" to "Exact"
* Copied GO:0070610 to GO:0070609 with type OBO_REL:is_a
* Copied GO:0070610 to GO:0070600 with type regulates
* Copied GO:0070610 to GO:0070608 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070610
* Populated new object GO:0070611 (macro)
* Changed name of GO:0070611 from "<new term>" to "histone methyltransferase activity (H3-R2 specific)"
* Set definition of GO:0070611 to "Catalysis of the addition of a methyl group to arginine at position 2 of the histone H3."
* Added definition dbxref GOC:mah to GO:0070611
* Added definition dbxref PMID:17898714 to GO:0070611
* Added synonym "histone-arginine N-methyltransferase activity (H3-R2 specific)" to GO:0070611
* Added general dbxref GOC:mah to synonym histone-arginine N-methyltransferase activity (H3-R2 specific) of GO:0070611
* Changed synonym scope of GO:0070611 from "Related" to "Exact"
* Copied GO:0070611 to GO:0008469 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070611
* Populated new object GO:0070612 (macro)
* Changed name of GO:0070612 from "<new term>" to "histone methyltransferase activity (H2A-R3 specific)"
* Set definition of GO:0070612 to "Catalysis of the addition of a methyl group to arginine at position 3 of the histone H2A."
* Added definition dbxref GOC:mah to GO:0070612
* Added definition dbxref PMID:17898714 to GO:0070612
* Added synonym "histone-arginine N-methyltransferase activity (H2A-R3 specific)" to GO:0070612
* Added general dbxref GOC:mah to synonym histone-arginine N-methyltransferase activity (H2A-R3 specific) of GO:0070612
* Changed synonym scope of GO:0070612 from "Related" to "Exact"
* Copied GO:0070612 to GO:0008469 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070612
* Populated new object GO:0070613 (macro)
* Changed name of GO:0070613 from "<new term>" to "regulation of protein processing"
* Set definition of GO:0070613 to "Any process that modulates the frequency, rate or extent of protein processing, the posttranslational modification of a protein leading to the attainment of the full functional capacity of the protein."
* Added definition dbxref GOC:mah to GO:0070613
* Copied GO:0070613 to GO:0031399 with type OBO_REL:is_a
* Copied GO:0070613 to GO:0016485 with type regulates
* Assigned namespace "biological_process" to GO:0070613
* Populated new object GO:0070614 (macro)
* Changed name of GO:0070614 from "<new term>" to "tungstate ion transport"
* Set definition of GO:0070614 to "The directed movement of tungstate (WO4 2-) ions into, out of, within or between cells. Tungstate is a bivalent oxoanion of tungstet."
* Added definition dbxref GOC:dh to GO:0070614
* Added GO:0070614 to category gosubset_prok
* Copied GO:0070614 to GO:0015698 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070614
* Populated new object GO:0070615 (macro)
* Changed name of GO:0070615 from "<new term>" to "nucleosome-dependent ATPase activity"
* Added comment "Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'."
* Set definition of GO:0070615 to "Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of one or more nucleosomes."
* Added definition dbxref GOC:mah to GO:0070615
* Added definition dbxref PMID:19165147 to GO:0070615
* Added synonym "nucleosome-activated ATPase activity" to GO:0070615
* Added general dbxref GOC:mah to synonym nucleosome-activated ATPase activity of GO:0070615
* Changed synonym scope of GO:0070615 from "Related" to "Exact"
* Copied GO:0070615 to GO:0042623 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070615
* Populated new object GO:0070616 (macro)
* Changed name of GO:0070616 from "<new term>" to "regulation of thiamin diphosphate biosynthetic process"
* Set definition of GO:0070616 to "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamin diphosphate."
* Added definition dbxref GOC:mah to GO:0070616
* Added GO:0070616 to category gosubset_prok
* Added synonym "regulation of thiamin diphosphate anabolism" to GO:0070616
* Added general dbxref GOC:mah to synonym regulation of thiamin diphosphate anabolism of GO:0070616
* Changed synonym scope of GO:0070616 from "Related" to "Exact"
* Added synonym "regulation of thiamin diphosphate biosynthesis" to GO:0070616
* Added general dbxref GOC:mah to synonym regulation of thiamin diphosphate biosynthesis of GO:0070616
* Changed synonym scope of GO:0070616 from "Related" to "Exact"
* Added synonym "regulation of thiamin diphosphate formation" to GO:0070616
* Added general dbxref GOC:mah to synonym regulation of thiamin diphosphate formation of GO:0070616
* Changed synonym scope of GO:0070616 from "Related" to "Exact"
* Added synonym "regulation of thiamin diphosphate synthesis" to GO:0070616
* Added general dbxref GOC:mah to synonym regulation of thiamin diphosphate synthesis of GO:0070616
* Changed synonym scope of GO:0070616 from "Related" to "Exact"
* Copied GO:0070616 to GO:0051196 with type OBO_REL:is_a
* Copied GO:0070616 to GO:0009229 with type regulates
* Assigned namespace "biological_process" to GO:0070616
* Populated new object GO:0070617 (macro)
* Changed name of GO:0070617 from "<new term>" to "negative regulation of thiamin diphosphate biosynthetic process"
* Set definition of GO:0070617 to "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamin diphosphate."
* Added definition dbxref GOC:mah to GO:0070617
* Added GO:0070617 to category gosubset_prok
* Added synonym "down regulation of thiamin diphosphate biosynthetic process" to GO:0070617
* Added general dbxref GOC:mah to synonym down regulation of thiamin diphosphate biosynthetic process of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Exact"
* Added synonym "down-regulation of thiamin diphosphate biosynthetic process" to GO:0070617
* Added general dbxref GOC:mah to synonym down-regulation of thiamin diphosphate biosynthetic process of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Exact"
* Added synonym "downregulation of thiamin diphosphate biosynthetic process" to GO:0070617
* Added general dbxref GOC:mah to synonym downregulation of thiamin diphosphate biosynthetic process of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Exact"
* Added synonym "inhibition of thiamin diphosphate biosynthetic process" to GO:0070617
* Added general dbxref GOC:mah to synonym inhibition of thiamin diphosphate biosynthetic process of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Narrow"
* Added synonym "negative regulation of thiamin diphosphate anabolism" to GO:0070617
* Added general dbxref GOC:mah to synonym negative regulation of thiamin diphosphate anabolism of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Exact"
* Added synonym "negative regulation of thiamin diphosphate biosynthesis" to GO:0070617
* Added general dbxref GOC:mah to synonym negative regulation of thiamin diphosphate biosynthesis of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Exact"
* Added synonym "negative regulation of thiamin diphosphate formation" to GO:0070617
* Added general dbxref GOC:mah to synonym negative regulation of thiamin diphosphate formation of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Exact"
* Added synonym "negative regulation of thiamin diphosphate synthesis" to GO:0070617
* Added general dbxref GOC:mah to synonym negative regulation of thiamin diphosphate synthesis of GO:0070617
* Changed synonym scope of GO:0070617 from "Related" to "Exact"
* Copied GO:0070617 to GO:0070616 with type OBO_REL:is_a
* Copied GO:0070617 to GO:0051198 with type OBO_REL:is_a
* Copied GO:0070617 to GO:0009229 with type negatively_regulates
* Assigned namespace "biological_process" to GO:0070617
* Populated new object GO:0070618 (macro)
* Changed name of GO:0070618 from "<new term>" to "Grb2-Sos complex"
* Set definition of GO:0070618 to "A protein complex that contains Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway."
* Added definition dbxref GOC:mah to GO:0070618
* Added definition dbxref PMID:7798267 to GO:0070618
* Added definition dbxref PMID:8940013 to GO:0070618
* Added synonym "Grb2-mSos1 complex" to GO:0070618
* Added general dbxref CORUM:2545 to synonym Grb2-mSos1 complex of GO:0070618
* Changed synonym scope of GO:0070618 from "Related" to "Narrow"
* Copied GO:0070618 to GO:0044459 with type OBO_REL:is_a
* Copied GO:0070618 to GO:0043234 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070618
* Populated new object GO:0070619 (macro)
* Changed name of GO:0070619 from "<new term>" to "Shc-Grb2-Sos complex"
* Set definition of GO:0070619 to "A protein complex that contains Grb2, the adaptor protein Shc and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway."
* Added definition dbxref GOC:mah to GO:0070619
* Added definition dbxref PMID:7970708 to GO:0070619
* Added definition dbxref PMID:8940013 to GO:0070619
* Added synonym "Shc-Grb2-mSos1 complex, EGF stimulated" to GO:0070619
* Added general dbxref CORUM:2553 to synonym Shc-Grb2-mSos1 complex, EGF stimulated of GO:0070619
* Changed synonym scope of GO:0070619 from "Related" to "Narrow"
* Copied GO:0070619 to GO:0043234 with type OBO_REL:is_a
* Copied GO:0070619 to GO:0044459 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070619
* Populated new object GO:0070620 (macro)
* Changed name of GO:0070620 from "<new term>" to "EGFR-Grb2-Sos complex"
* Set definition of GO:0070620 to "A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway."
* Added definition dbxref GOC:mah to GO:0070620
* Added definition dbxref PMID:7798267 to GO:0070620
* Added definition dbxref PMID:8940013 to GO:0070620
* Added synonym "Egfr-Grb2-mSos1 complex, EGF stimulated" to GO:0070620
* Added general dbxref CORUM:2548 to synonym Egfr-Grb2-mSos1 complex, EGF stimulated of GO:0070620
* Changed synonym scope of GO:0070620 from "Related" to "Narrow"
* Copied GO:0070620 to GO:0044459 with type OBO_REL:is_a
* Copied GO:0070620 to GO:0043234 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070620
* Populated new object GO:0070621 (macro)
* Changed name of GO:0070621 from "<new term>" to "EGFR-Shc-Grb2-Sos complex"
* Set definition of GO:0070621 to "A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2, the adaptor protein SHC and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway."
* Added definition dbxref GOC:mah to GO:0070621
* Added definition dbxref PMID:7798267 to GO:0070621
* Added definition dbxref PMID:8940013 to GO:0070621
* Copied GO:0070621 to GO:0044459 with type OBO_REL:is_a
* Copied GO:0070621 to GO:0043234 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070621
* Populated new object GO:0070622 (macro)
* Changed name of GO:0070622 from "<new term>" to "UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex"
* Set definition of GO:0070622 to "A protein complex that possesses UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity; the bovine complex contains disulfide-linked homodimers of 166- and 51-kDa subunits and two identical, noncovalently associated 56-kDa subunits."
* Added definition dbxref GOC:mah to GO:0070622
* Added definition dbxref PMID:8940155 to GO:0070622
* Added synonym "N-acetylglucosamine-1-phosphotransferase complex" to GO:0070622
* Added general dbxref CORUM:406 to synonym N-acetylglucosamine-1-phosphotransferase complex of GO:0070622
* Added synonym "UDP-N-acetylglucosamine:lysosomal-enzyme N-acetylglucosamine-1-phosphotransferase complex" to GO:0070622
* Added general dbxref PMID:8940155 to synonym UDP-N-acetylglucosamine:lysosomal-enzyme N-acetylglucosamine-1-phosphotransferase complex of GO:0070622
* Changed synonym scope of GO:0070622 from "Related" to "Exact"
* Copied GO:0070622 to GO:0005764 with type part_of
* Copied GO:0070622 to GO:0043234 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070622
* Populated new object GO:0080129 (macro)
* Changed name of GO:0080129 from "<new term>" to "proteasome core complex assembly"
* Set definition of GO:0080129 to "The aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles."
* Added definition dbxref PMID:12401807 to GO:0080129
* Added definition dbxref PMID:17971041 to GO:0080129
* Added synonym "20S proteasome assembly" to GO:0080129
* Changed synonym scope of GO:0080129 from "Related" to "Exact"
* Copied GO:0080129 to GO:0043248 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0080129
* Populated new object GO:0080130 (macro)
* Changed name of GO:0080130 from "<new term>" to "L-phenylalanine:2-oxoglutarate aminotransferase activity"
* Added comment "This reaction falls within the larger set of reactions associated with EC 2.6.1.57 and several other EC numbers (See BRENDA:http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.57)."
* Set definition of GO:0080130 to "Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = phenylpyruvate + L-glutamate."
* Added definition dbxref GOC:pmn_curators to GO:0080130
* Added definition dbxref PMID:18394996 to GO:0080130
* Added synonym "L-phenylalanine:alpha-ketoglutarate aminotransferase activity" to GO:0080130
* Changed synonym scope of GO:0080130 from "Related" to "Exact"
* Copied GO:0080130 to GO:0070546 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0080130
* Populated new object GO:0080131 (macro)
* Changed name of GO:0080131 from "<new term>" to "hydroxyjasmonate sulfotransferase activity"
* Set definition of GO:0080131 to "Catalysis of the reaction: a hydroxyjasmonate + PAPS (phosphoadenosine-5'-phosphosulfate) = a hydroxyjasmonate sulfate + PAP (adenosine-3',5'-bisphosphate)."
* Added definition dbxref E.C.:2.8.2.- to GO:0080131
* Added definition dbxref GOC:pmn_curators to GO:0080131
* Added definition dbxref MetaCyc:RXN-10451 to GO:0080131
* Added definition dbxref MetaCyc:RXN-10453 to GO:0080131
* Added definition dbxref PMID:12637544 to GO:0080131
* Added synonym "12-hydroxyjasmonate sulfotransferase activity" to GO:0080131
* Changed synonym scope of GO:0080131 from "Related" to "Narrow"
* Added synonym "12-hydroxyjasmonic acid sulfotransferase activity" to GO:0080131
* Changed synonym scope of GO:0080131 from "Related" to "Narrow"
* Added synonym "12-OHJA sulfotransferase activity" to GO:0080131
* Changed synonym scope of GO:0080131 from "Related" to "Narrow"
* Added synonym "hydroxyjasmonic acid sulfotransferase activity" to GO:0080131
* Changed synonym scope of GO:0080131 from "Related" to "Exact"
* Added synonym "OHJA sulfotransferase activity" to GO:0080131
* Changed synonym scope of GO:0080131 from "Related" to "Exact"
* Copied GO:0080131 to GO:0008146 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0080131
* Copied GO:0001840 to GO:0043009 with type part_of
* Changed name of GO:0001950 from "PME fraction" to "plasma membrane enriched fraction"
* Added synonym "PME fraction" to GO:0001950
* Added general dbxref GOC:mah to synonym PME fraction of GO:0001950
* Changed name of GO:0002085 from "repression of premature neural plate formation" to "inhibition of neuroepithelial cell differentiation"
* Changed definition of GO:0002085 from "The process that prevents cells of the epiblast from differentiating into neuroepithelial cells before the appropriate time." to "Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process by which epiblast cells acquire specialized features of neuroepithelial cells."
* Deleted synonym "negative regulation of neural plate formation" from GO:0002085
* Added synonym "repression of premature neural plate formation" to GO:0002085
* Added general dbxref GOC:tairtb to synonym repression of premature neural plate formation of GO:0002085
* Added general dbxref GOC:dph to synonym repression of premature neural plate formation of GO:0002085
* Changed synonym scope of GO:0002085 from "Related" to "Narrow"
* Deleted GO:0002085 --negatively_regulates--> GO:0055124
* Deleted GO:0002085 --part_of--> GO:0043009
* Copied GO:0002085 to GO:0021990 with type negatively_regulates
* Copied GO:0002085 to GO:0060563 with type negatively_regulates
* Deleted synonym "nterleukin-33 receptor ligand" from GO:0002112
* Added synonym "interleukin-33 receptor ligand" to GO:0002112
* Added general dbxref GOC:mah to synonym interleukin-33 receptor ligand of GO:0002112
* Changed synonym scope of GO:0002112 from "Related" to "Narrow"
* Changed comment from "Different forms of the complex differing in type of N-glycosylation of polycystin-1 can exist (endoglycosidase sensitive and endoglcosidase resistant)." to "Different forms of the complex differing in type of N-glycosylation of polycystin-1 can exist (endoglycosidase sensitive and endoglycosidase resistant)."
* Added synonym "anaphase-promoting complex activity" to GO:0004842
* Added general dbxref GOC:tairtb to synonym anaphase-promoting complex activity of GO:0004842
* Added general dbxref GOC:dph to synonym anaphase-promoting complex activity of GO:0004842
* Changed synonym scope of GO:0004842 from "Related" to "Narrow"
* Changed definition of GO:0005183 from "The action characteristic of gonadotropin hormone-releasing hormone (GnRH), any of a family of decapeptide amide hormones that are released by the eleased by the mammalian hypothalamus into the hypophyseal-portal circulation in response to neural and/or chemical stimuli. Upon receptor binding, GnRH causes the release of follicle-stimulating hormone and luteinizing hormone by the anterior pituitary." to "The action characteristic of gonadotropin hormone-releasing hormone (GnRH), any of a family of decapeptide amide hormones that are released by the mammalian hypothalamus into the hypophyseal-portal circulation in response to neural and/or chemical stimuli. Upon receptor binding, GnRH causes the release of follicle-stimulating hormone and luteinizing hormone by the anterior pituitary."
* Deleted GO:0006465 --OBO_REL:is_a--> GO:0016485
* Copied GO:0006465 to GO:0051605 with type OBO_REL:is_a
* Changed name of GO:0007092 from "activation of anaphase-promoting complex during mitotic cell cycle" to "activation of anaphase-promoting complex activity during mitotic cell cycle"
* Deleted GO:0007092 --part_of--> GO:0030071
* Deleted GO:0007092 --part_of--> GO:0031145
* Copied GO:0007092 to GO:0031145 with type positively_regulates
* Copied GO:0007092 to GO:0045842 with type OBO_REL:is_a
* Added synonym "NAD(P)H dehydrogenase complex (plastoquinone) assembly" to GO:0010275
* Changed synonym scope of GO:0010275 from "Related" to "Narrow"
* Changed name of GO:0010953 from "regulation of protein maturation by proteolysis" to "regulation of protein maturation by peptide bond cleavage"
* Changed definition of GO:0010953 from "Any process that modulates the rate, frequency or extent of protein maturation by proteolysis. Protein maturation by proteolysis is the hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein." to "Any process that modulates the rate, frequency or extent of protein maturation by peptide bond cleavage. Protein maturation by peptide bond cleavage is the hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein."
* Added definition dbxref GOC:mah to GO:0010953
* Deleted GO:0010953 --OBO_REL:is_a--> GO:0030162
* Copied GO:0010953 to GO:0070613 with type OBO_REL:is_a
* Changed name of GO:0010954 from "positive regulation of protein maturation by proteolysis" to "positive regulation of protein maturation by peptide bond cleavage"
* Changed definition of GO:0010954 from "Any process that increases the rate, frequency or extent of protein maturation by proteolysis. Protein maturation by proteolysis is the hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein." to "Any process that increases the rate, frequency or extent of protein maturation by peptide bond cleavage. Protein maturation by peptide bond cleavage is the hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein."
* Added definition dbxref GOC:mah to GO:0010954
* Deleted GO:0010954 --OBO_REL:is_a--> GO:0045862
* Copied GO:0010954 to GO:0031401 with type OBO_REL:is_a
* Changed name of GO:0010955 from "negative regulation of protein maturation by proteolysis" to "negative regulation of protein maturation by peptide bond cleavage"
* Changed definition of GO:0010955 from "Any process that decreases the rate, frequency or extent of protein maturation by proteolysis. Protein maturation by proteolysis is the hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein." to "Any process that decreases the rate, frequency or extent of protein maturation by peptide bond cleavage. Protein peptide bond cleavage bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein."
* Added definition dbxref GOC:mah to GO:0010955
* Deleted GO:0010955 --OBO_REL:is_a--> GO:0045861
* Copied GO:0010955 to GO:0031400 with type OBO_REL:is_a
* Changed name of GO:0014045 from "establishment of endotehlial blood-brain barrier" to "establishment of endothelial blood-brain barrier"
* Changed definition of GO:0014703 from "A process whereby force is generated within oscillatory skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Oscillatory muscle contraction occurs in insect wing muscles and is characterised by asynchrony between action potential and contraction and by stretch activation." to "A process whereby force is generated within oscillatory skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Oscillatory muscle contraction occurs in insect wing muscles and is characterized by asynchrony between action potential and contraction and by stretch activation."
* Changed definition of GO:0016485 from "The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations." to "The posttranslational modification, which may include cleavage of peptide bonds, of a protein, leading to the attainment of the full functional capacity of the protein. Protein processing particularly affects secretory proteins and proteins targeted for membranes or specific cellular locations."
* Added definition dbxref GOC:mah to GO:0016485
* Added synonym "protein maturation by posttranslational modification" to GO:0016485
* Added general dbxref GOC:mah to synonym protein maturation by posttranslational modification of GO:0016485
* Changed synonym scope of GO:0016485 from "Related" to "Exact"
* Deleted GO:0016485 --OBO_REL:is_a--> GO:0043687
* Copied GO:0016485 to GO:0051604 with type OBO_REL:is_a
* Changed definition of GO:0016514 from "Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components." to "A SWI/SNF-type complex that contains nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components."
* Deleted synonym "PBAF complex" from GO:0016514
* Deleted synonym "Polybromo- and BAF containing complex" from GO:0016514
* Deleted synonym "SWI/SNF complex B" from GO:0016514
* Added synonym "SWI-SNF complex" to GO:0016514
* Added general dbxref GOC:mah to synonym SWI-SNF complex of GO:0016514
* Changed synonym scope of GO:0016514 from "Related" to "Exact"
* Deleted GO:0016514 --OBO_REL:is_a--> GO:0016585
* Copied GO:0016514 to GO:0070603 with type OBO_REL:is_a
* Changed definition of GO:0016516 from "A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukni-2 receptor." to "A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukin-2 receptor."
* Changed definition of GO:0019814 from "A protein complex that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains, held together by disulfide bonds and sometimes complexed with additional proteins. An immunoglobin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph." to "A protein complex that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains, held together by disulfide bonds and sometimes complexed with additional proteins. An immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph."
* Changed definition of GO:0031554 from "Any process that modulates the frequency, rate, extent, or location of transcription termination." to "Any process that modulates the frequency, rate, extent, or location of transcription termination. Transcription termination is the process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA."
* Copied GO:0031565 to GO:0032465 with type OBO_REL:is_a
* Changed definition of GO:0032427 from "Interacting selectively with the GTPase protein binding domain (GDB) domain of a protein. The GBD is a short motif, inculding a minimum region of 16 amino acids, identified in proteins that bind to small GTPases such as Cdc42 and Rac." to "Interacting selectively with the GTPase protein binding domain (GDB) domain of a protein. The GBD is a short motif, including a minimum region of 16 amino acids, identified in proteins that bind to small GTPases such as Cdc42 and Rac."
* Changed name of GO:0033050 from "clavulanic acid biosythetic process" to "clavulanic acid biosynthetic process"
* Changed name of GO:0033495 from "ferulate biosythetic process" to "ferulate biosynthetic process"
* Changed name of GO:0033497 from "sinapate biosythetic process" to "sinapate biosynthetic process"
* Changed name of GO:0033525 from "sinapate ester biosythetic process" to "sinapate ester biosynthetic process"
* Changed definition of GO:0035060 from "A multi-subunit ATP-dependent chromatin remodeling complex, a counterpart of the SWI/SNF complex that contains the ATPase product of the Drosophila brahma gene." to "A SWI/SNF-type complex that contains the ATPase product of the Drosophila brahma gene, or an ortholog thereof."
* Deleted GO:0035060 --OBO_REL:is_a--> GO:0016585
* Copied GO:0035060 to GO:0070603 with type OBO_REL:is_a
* Deleted GO:0035103 --OBO_REL:is_a--> GO:0016485
* Copied GO:0035103 to GO:0051605 with type OBO_REL:is_a
* Changed definition of GO:0043091 from "The directed movement of L-arginine, the L-enantiomec of 2-amino-5-guanidinopentanoic acid, into a cell or organelle." to "The directed movement of L-arginine, the L-enantiomer of 2-amino-5-guanidinopentanoic acid, into a cell or organelle."
* Added synonym "26S proteasome assembly" to GO:0043248
* Changed synonym scope of GO:0043248 from "Related" to "Narrow"
* Changed definition of GO:0048505 from "The process controlling the timing and/or rate at which relatively unspecialized cells acquire specialized features." to "The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features."
* Changed name of GO:0051487 from "activation of anaphase-promoting complex during meiotic cell cycle" to "activation of anaphase-promoting complex activity during meiotic cell cycle"
* Changed name of GO:0051488 from "activation of anaphase-promoting complex" to "activation of anaphase-promoting complex activity"
* Changed name of GO:0051605 from "protein maturation by proteolysis" to "protein maturation by peptide bond cleavage"
* Changed definition of GO:0051605 from "The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein." to "The hydrolysis of a peptide bond or bonds within a protein as part of protein maturation, the process leading to the attainment of the full functional capacity of a protein."
* Added definition dbxref GOC:mah to GO:0051605
* Added general dbxref GOC:mah to synonym peptidolysis during protein maturation of GO:0051605
* Changed synonym scope of GO:0051605 from "Exact" to "Related"
* Added synonym "protein maturation by peptide bond hydrolysis" to GO:0051605
* Added general dbxref GOC:mah to synonym protein maturation by peptide bond hydrolysis of GO:0051605
* Changed synonym scope of GO:0051605 from "Related" to "Exact"
* Added synonym "protein maturation by proteolysis" to GO:0051605
* Added general dbxref GOC:mah to synonym protein maturation by proteolysis of GO:0051605
* Deleted GO:0051605 --OBO_REL:is_a--> GO:0006508
* Deleted GO:0051605 --OBO_REL:is_a--> GO:0051604
* Copied GO:0051605 to GO:0016485 with type OBO_REL:is_a
* Deleted GO:0055124 --OBO_REL:is_a--> GO:0021990
* org.geneontology.oboedit.datamodel.history.ObsoleteObjectHistoryItem at 16994d5
* Changed definition of GO:0060164 from "The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron." to "The process controlling the activation and/or rate at which a relatively unspecialized cell acquires features of a neuron."
* Changed name of GO:0060367 from "saggital suture morphogenesis" to "sagittal suture morphogenesis"
* Changed definition of GO:0060367 from "The process by which the saggital suture is generated and organized. Morphogenesis pertains to the creation of form." to "The process by which the sagittal suture is generated and organized. Morphogenesis pertains to the creation of form."
* Changed definition of GO:0060429 from "The process whose specific outcome is the progression of an epitelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure." to "The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure."
* Changed name of GO:0060480 from "lung goblet cell differentation" to "lung goblet cell differentiation"
* Changed name of GO:0060493 from "mesenchymal-enodermal cell signaling involved in lung induction" to "mesenchymal-endodermal cell signaling involved in lung induction"
* Changed definition of GO:0060493 from "Any process that mediates the transfer of information from a mesenchymal cell to an endodermal cell and cotributes to the formation of the lung bud." to "Any process that mediates the transfer of information from a mesenchymal cell to an endodermal cell and contributes to the formation of the lung bud."
* Changed name of GO:0060496 from "mesenchymal-enodermal cell signaling involved in lung development" to "mesenchymal-endodermal cell signaling involved in lung development"
* Changed definition of GO:0060510 from "The process whereby a relatively unspecialized cell acquires specialized features of a Type II pneumocyte. A Type II pneumocyte is a surfactant secreting cell that contains abundant cytoplasm containing numerous lipid-rich multilammelar bodies." to "The process whereby a relatively unspecialized cell acquires specialized features of a Type II pneumocyte. A Type II pneumocyte is a surfactant secreting cell that contains abundant cytoplasm containing numerous lipid-rich multilamellar bodies."
* Changed name of GO:0060516 from "primary protstatic bud elongation" to "primary prostatic bud elongation"
* Deleted synonym "prostate bud elongation involved in protstate morphogenesis" from GO:0060516
* Added synonym "prostate bud elongation involved in prostate morphogenesis" to GO:0060516
* Added general dbxref GOC:dph to synonym prostate bud elongation involved in prostate morphogenesis of GO:0060516
* Changed synonym scope of GO:0060516 from "Related" to "Exact"
* Changed name of GO:0060517 from "epithelial cell proliferation involved in protstatic bud elongation" to "epithelial cell proliferation involved in prostatic bud elongation"
* Changed definition of GO:0060522 from "Signaling at short range from mesenchymal cells to cells of an epitelium that results in a developmental change in the epithelial cells." to "Signaling at short range from mesenchymal cells to cells of an epithelium that results in a developmental change in the epithelial cells."
* Changed name of GO:0060527 from "prostate epithelial cord abrorization involved in prostate glandular acinus morphogenesis" to "prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis"
* Changed definition of GO:0070088 from "An inclusion body located in the cytoplasm that consists of polyhydroxyalkanoate (PHA) molecules and associated proteins, surrounded by a phospholipid monolayer; the proteins include PHA synthase, PHA depolymerases and 3HB-oligomer hydroxylase, phasins (PhaPs), which are thought to be the major structural proteins of the membrane surrounding the inclusion, and the regulator of phasin expresssion PhaR." to "An inclusion body located in the cytoplasm that consists of polyhydroxyalkanoate (PHA) molecules and associated proteins, surrounded by a phospholipid monolayer; the proteins include PHA synthase, PHA depolymerase and 3HB-oligomer hydroxylase, phasins (PhaPs), which are thought to be the major structural proteins of the membrane surrounding the inclusion, and the regulator of phasin expression PhaR."
* Changed definition of GO:0070137 from "Catalysis of the hydrolysis of peptide bonds between analpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO)." to "Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO)."
* Changed definition of GO:0070139 from "Catalysis of the hydrolysis of peptide bonds between analpha-carboxyl group and an alpha-amino group within the small conjugating protein SUMO." to "Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within the small conjugating protein SUMO."
* Changed definition of GO:0070231 from "The process of apopotosis in a T cell." to "The process of apoptosis in a T cell."
* Changed definition of GO:0070285 from "The process whose specific outcome is the progression of a pigmen cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate." to "The process whose specific outcome is the progression of a pigment cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate."
* Deleted synonym "renal watern reabsorption" from GO:0070295
* Added synonym "renal water reabsorption" to GO:0070295
* Added general dbxref GOC:dph to synonym renal water reabsorption of GO:0070295
* Changed synonym scope of GO:0070295 from "Related" to "Exact"
* Changed definition of GO:0070449 from "A transcription elongation factor complex that suppresses RNA polymerase II pausing, and may act by promoting proper alignment of the 3?-end of nascent transcripts with the polymerase catalytic site. Consists of a transcriptionally active Elongin A subunit (abut 100 kDa)and two smaller Elongin B (about 18 kDa) and Elongin C (about 15 kDa)subunits." to "A transcription elongation factor complex that suppresses RNA polymerase II pausing, and may act by promoting proper alignment of the 3'-end of nascent transcripts with the polymerase catalytic site. Consists of a transcriptionally active Elongin A subunit (abut 100 kDa)and two smaller Elongin B (about 18 kDa) and Elongin C (about 15 kDa)subunits."
* Changed definition of GO:0070477 from "An intracellular part that represents the innermost portion of an endospore; the endospore core is dehydrated, enriched in dipicolinic acid and divaletn cations, and metabolically inactive." to "An intracellular part that represents the innermost portion of an endospore; the endospore core is dehydrated, enriched in dipicolinic acid and divalent cations, and metabolically inactive."
* Changed definition of GO:0070500 from "The chemical reactions and pathways involving poly-gamma-glutamate, a polymer of D- and/or L-glutamatic acid residues linked by gamma-peptidyl bonds." to "The chemical reactions and pathways involving poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds."
* Changed definition of GO:0070501 from "The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamatic acid residues linked by gamma-peptidyl bonds." to "The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds."
* Deleted synonym "poly-gamma-glutamate biosythesis" from GO:0070501
* Deleted synonym "poly-gamma-glutamate sythesis" from GO:0070501
* Added synonym "poly-gamma-glutamate biosynthesis" to GO:0070501
* Added general dbxref GOC:mah to synonym poly-gamma-glutamate biosynthesis of GO:0070501
* Changed synonym scope of GO:0070501 from "Related" to "Exact"
* Added synonym "poly-gamma-glutamate synthesis" to GO:0070501
* Added general dbxref GOC:mah to synonym poly-gamma-glutamate synthesis of GO:0070501
* Changed synonym scope of GO:0070501 from "Related" to "Exact"
* Changed definition of GO:0070502 from "The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamatic acid residues linked by gamma-peptidyl bonds, that forms all or part of a bacterial capsule." to "The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds, that forms all or part of a bacterial capsule."
* Deleted synonym "capsule poly-gamma-glutamate biosythesis" from GO:0070502
* Deleted synonym "capsule poly-gamma-glutamate sythesis" from GO:0070502
* Added synonym "capsule poly-gamma-glutamate biosynthesis" to GO:0070502
* Added general dbxref GOC:mah to synonym capsule poly-gamma-glutamate biosynthesis of GO:0070502
* Changed synonym scope of GO:0070502 from "Related" to "Exact"
* Added synonym "capsule poly-gamma-glutamate synthesis" to GO:0070502
* Added general dbxref GOC:mah to synonym capsule poly-gamma-glutamate synthesis of GO:0070502
* Changed synonym scope of GO:0070502 from "Related" to "Exact"
* Changed definition of GO:0070522 from "A heterodimeric protein complex that has endonuclease activity specific for bubble structures characteristic of certain DNA lesions. The subunits are konw as XPF/ERCC4 and ERCC1 in mammals, and Rad1p and Rad10p in S. cerevisiae." to "A heterodimeric protein complex that has endonuclease activity specific for bubble structures characteristic of certain DNA lesions. The subunits are known as XPF/ERCC4 and ERCC1 in mammals, and Rad1p and Rad10p in S. cerevisiae."
* Changed definition of GO:0070543 from "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acide stimulus." to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus."
* Changed definition of GO:0080014 from "Catalysis of the addition of a hydroxyl group to thalianol ((13R,14R,17E)-podioda-8,17,21-trien-3beta-ol) to create thalian-diol((13R,14R,17E)-podioda-8,17,21-trien-3beta,?-diol). Several thalian-diol isomers may be created by the same enzyme because the hydroxyl group may be attached at one of several different available carbons in ring B or C of thalianol (as indicated by the ''?'')." to "Catalysis of the addition of a hydroxyl group to thalianol ((13R,14R,17E)-podioda-8,17,21-trien-3beta-ol) to create thalian-diol ((13R,14R,17E)-podioda-8,17,21-trien-3beta,?-diol). Several thalian-diol isomers may be created by the same enzyme because the hydroxyl group may be attached at one of several different available carbons in ring B or C of thalianol (as indicated by the ''?'')."
* Deleted synonym "postive regulation of cytokinin mediated signalling" from GO:0080038
* Added synonym "positive regulation of cytokinin mediated signalling" to GO:0080038
* Added general dbxref GOC:mah to synonym positive regulation of cytokinin mediated signalling of GO:0080038
* Changed synonym scope of GO:0080038 from "Related" to "Exact"
* Changed definition of GO:0080051 from "The directed movement of cutin into, out of, within or between cells. Cutin, which consisits of C16-18 fatty acids, is the major component of the cuticle that covers the plant surface." to "The directed movement of cutin into, out of, within or between cells. Cutin, which consists of C16-18 fatty acids, is the major component of the cuticle that covers the plant surface."
* Changed comment from "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 (See BRENDA:http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.28; note: 3-indole-2-oxopropanoate = indolepyruvate)." to "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 (See BRENDA: http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.28; note: 3-indole-2-oxopropanoate = indolepyruvate)."
* Changed comment from "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 and several other EC numbers (See BRENDA:http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.44)." to "This reaction falls within the larger set of reactions associated with EC 2.6.1.28 and several other EC numbers (See BRENDA: http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.44)."
* Changed comment from "This reaction falls within the larger set of reactions associated with EC 2.6.1.5 (See BRENDA:http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.5)." to "This reaction falls within the larger set of reactions associated with EC 2.6.1.5 (See BRENDA: http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.5)."
* Changed comment from "This reaction falls within the larger set of reactions associated with EC 2.6.1.50 (See BRENDA:http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.50)." to "This reaction falls within the larger set of reactions associated with EC 2.6.1.50 (See BRENDA: http://www.brenda-enzymes.org/php/result_flat.php4?ecno=2.6.1.50)."
* Destroyed object ID:0000000
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