[Go-diff] GO update 02/02/2009

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Mon Feb 2 21:30:47 PST 2009


OBODIFF of gene_ontology_write.obo version 1.427 by 1.430

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0010880
* Created object of type obo:TERM with id GO:0010881
* Created object of type obo:TERM with id GO:0010882
* Created object of type obo:TERM with id GO:0010883
* Created object of type obo:TERM with id GO:0010884
* Created object of type obo:TERM with id GO:0010885
* Created object of type obo:TERM with id GO:0010886
* Created object of type obo:TERM with id GO:0010887
* Created object of type obo:TERM with id GO:0010888
* Created object of type obo:TERM with id GO:0010889
* Created object of type obo:TERM with id GO:0010890
* Created object of type obo:TERM with id GO:0010891
* Created object of type obo:TERM with id GO:0010892
* Created object of type obo:TERM with id GO:0060417
* Created object of type obo:TERM with id GO:0060418
* Created object of type obo:TERM with id GO:0060419
* Created object of type obo:TERM with id GO:0060420
* Created object of type obo:TERM with id GO:0060421
* Created object of type obo:TERM with id GO:0070283
* Created object of type obo:TERM with id GO:0070284
* Created object of type obo:TERM with id GO:0070285
* Created object of type obo:TERM with id GO:0070286
* Created object of type obo:TERM with id GO:0070287
* Created object of type obo:TERM with id GO:0070288
* Created object of type obo:TERM with id GO:0070289
* Created object of type obo:TERM with id GO:0070290
* Created object of type obo:TERM with id GO:0070291
* Created object of type obo:TERM with id GO:0070292
* Created object of type obo:TERM with id GO:0070293
* Created object of type obo:TERM with id GO:0070294
* Created object of type obo:TERM with id GO:0070295
* Populated new object GO:0010880 (macro)
  * Changed name of GO:0010880 from "<new term>" to "regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum"
  * Set definition of GO:0010880 to "Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process whereby the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels."
  * Added definition dbxref GOC:dph to GO:0010880
  * Added definition dbxref GOC:tb to GO:0010880
  * Copied GO:0010880 to GO:0014808 with type regulates
  * Copied GO:0010880 to GO:0051279 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010880
* Populated new object GO:0010881 (macro)
  * Changed name of GO:0010881 from "<new term>" to "regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion"
  * Set definition of GO:0010881 to "Any process that modulates the frequency, rate or extent of cardiac muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction."
  * Added definition dbxref GOC:dph to GO:0010881
  * Added definition dbxref GOC:tb to GO:0010881
  * Copied GO:0010881 to GO:0010882 with type OBO_REL:is_a
  * Copied GO:0010881 to GO:0010880 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010881
* Populated new object GO:0010882 (macro)
  * Changed name of GO:0010882 from "<new term>" to "regulation of cardiac muscle contraction by calcium ion signaling"
  * Set definition of GO:0010882 to "Any process that modulates the frequency, rate or extent of cardiac muscle contraction by changing the calcium ion signals that trigger contraction."
  * Added definition dbxref GOC:dph to GO:0010882
  * Added definition dbxref GOC:tb to GO:0010882
  * Copied GO:0010882 to GO:0055117 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010882
* Populated new object GO:0010883 (macro)
  * Changed name of GO:0010883 from "<new term>" to "regulation of lipid storage"
  * Set definition of GO:0010883 to "Any process that modulates the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development."
  * Added definition dbxref GOC:dph to GO:0010883
  * Added definition dbxref GOC:tb to GO:0010883
  * Added synonym "regulation of lipid sequestration" to GO:0010883
  * Added general dbxref GOC:tb to synonym regulation of lipid sequestration of GO:0010883
  * Added general dbxref GOC:dph to synonym regulation of lipid sequestration of GO:0010883
  * Changed synonym scope of GO:0010883 from "Related" to "Narrow"
  * Copied GO:0010883 to GO:0032879 with type OBO_REL:is_a
  * Copied GO:0010883 to GO:0019915 with type regulates
  * Assigned namespace "biological_process" to GO:0010883
* Populated new object GO:0010884 (macro)
  * Changed name of GO:0010884 from "<new term>" to "positive regulation of lipid storage"
  * Set definition of GO:0010884 to "Any process that increases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development."
  * Added definition dbxref GOC:dph to GO:0010884
  * Added definition dbxref GOC:tb to GO:0010884
  * Added synonym "positive regulation of lipid sequestration" to GO:0010884
  * Added general dbxref GOC:tb to synonym positive regulation of lipid sequestration of GO:0010884
  * Added general dbxref GOC:dph to synonym positive regulation of lipid sequestration of GO:0010884
  * Changed synonym scope of GO:0010884 from "Related" to "Narrow"
  * Copied GO:0010884 to GO:0048518 with type OBO_REL:is_a
  * Copied GO:0010884 to GO:0019915 with type positively_regulates
  * Copied GO:0010884 to GO:0010883 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010884
* Populated new object GO:0010885 (macro)
  * Changed name of GO:0010885 from "<new term>" to "regulation of cholesterol storage"
  * Set definition of GO:0010885 to "Any process that modulates the rate or extent of cholesterol storage. Cholesterol storage is the accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones."
  * Added definition dbxref GOC:dph to GO:0010885
  * Added definition dbxref GOC:tb to GO:0010885
  * Copied GO:0010885 to GO:0010878 with type regulates
  * Copied GO:0010885 to GO:0010883 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010885
* Populated new object GO:0010886 (macro)
  * Changed name of GO:0010886 from "<new term>" to "positive regulation of cholesterol storage"
  * Set definition of GO:0010886 to "Any process that increases the rate or extent of cholesterol storage. Cholesterol storage is the accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones."
  * Added definition dbxref GOC:dph to GO:0010886
  * Added definition dbxref GOC:tb to GO:0010886
  * Added synonym "positive regulation of cholesterol sequestration" to GO:0010886
  * Added general dbxref GOC:tb to synonym positive regulation of cholesterol sequestration of GO:0010886
  * Added general dbxref GOC:dph to synonym positive regulation of cholesterol sequestration of GO:0010886
  * Changed synonym scope of GO:0010886 from "Related" to "Narrow"
  * Copied GO:0010886 to GO:0010878 with type positively_regulates
  * Copied GO:0010886 to GO:0010885 with type OBO_REL:is_a
  * Copied GO:0010886 to GO:0010884 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010886
* Populated new object GO:0010887 (macro)
  * Changed name of GO:0010887 from "<new term>" to "negative regulation of cholesterol storage"
  * Set definition of GO:0010887 to "Any process that decreases the rate or extent of cholesterol storage. Cholesterol storage is the accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones."
  * Added definition dbxref GOC:dph to GO:0010887
  * Added definition dbxref GOC:tb to GO:0010887
  * Added synonym "negative regulation of cholesterol sequestration" to GO:0010887
  * Added general dbxref GOC:tb to synonym negative regulation of cholesterol sequestration of GO:0010887
  * Added general dbxref GOC:dph to synonym negative regulation of cholesterol sequestration of GO:0010887
  * Changed synonym scope of GO:0010887 from "Related" to "Narrow"
  * Copied GO:0010887 to GO:0010878 with type negatively_regulates
  * Copied GO:0010887 to GO:0010888 with type OBO_REL:is_a
  * Copied GO:0010887 to GO:0010885 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010887
* Populated new object GO:0010888 (macro)
  * Changed name of GO:0010888 from "<new term>" to "negative regulation of lipid storage"
  * Set definition of GO:0010888 to "Any process that modulates the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development."
  * Added definition dbxref GOC:dph to GO:0010888
  * Added definition dbxref GOC:tb to GO:0010888
  * Copied GO:0010888 to GO:0019915 with type negatively_regulates
  * Copied GO:0010888 to GO:0010883 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010888
* Populated new object GO:0010889 (macro)
  * Changed name of GO:0010889 from "<new term>" to "regulation of sequestering of triacylglycerol"
  * Set definition of GO:0010889 to "Any process that modulates the rate, frequency or extent of sequestering of triacylglycerol. Triacylglycerol sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system."
  * Added definition dbxref GOC:dph to GO:0010889
  * Added definition dbxref GOC:tb to GO:0010889
  * Added synonym "regulation of triacylglycerol sequestration" to GO:0010889
  * Added general dbxref GOC:tb to synonym regulation of triacylglycerol sequestration of GO:0010889
  * Added general dbxref GOC:dph to synonym regulation of triacylglycerol sequestration of GO:0010889
  * Changed synonym scope of GO:0010889 from "Related" to "Exact"
  * Copied GO:0010889 to GO:0030730 with type regulates
  * Copied GO:0010889 to GO:0010883 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010889
* Populated new object GO:0010890 (macro)
  * Changed name of GO:0010890 from "<new term>" to "positive regulation of sequestering of triacylglycerol"
  * Set definition of GO:0010890 to "Any process that increases the rate, frequency or extent of sequestering of triacylglycerol. Triacylglycerol sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system."
  * Added definition dbxref GOC:dph to GO:0010890
  * Added definition dbxref GOC:tb to GO:0010890
  * Added synonym "positive regulation of triacylglycerol sequestration" to GO:0010890
  * Added general dbxref GOC:tb to synonym positive regulation of triacylglycerol sequestration of GO:0010890
  * Added general dbxref GOC:dph to synonym positive regulation of triacylglycerol sequestration of GO:0010890
  * Changed synonym scope of GO:0010890 from "Related" to "Exact"
  * Copied GO:0010890 to GO:0030730 with type positively_regulates
  * Copied GO:0010890 to GO:0010884 with type OBO_REL:is_a
  * Copied GO:0010890 to GO:0010889 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010890
* Populated new object GO:0010891 (macro)
  * Changed name of GO:0010891 from "<new term>" to "negative regulation of sequestering of triacylglycerol"
  * Set definition of GO:0010891 to "Any process that modulates the rate, frequency or extent of sequestering of triacylglycerol. Triacylglycerol sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system."
  * Added definition dbxref GOC:dph to GO:0010891
  * Added definition dbxref GOC:tb to GO:0010891
  * Added synonym "negative regulation of triacylglycerol sequestration" to GO:0010891
  * Added general dbxref GOC:tb to synonym negative regulation of triacylglycerol sequestration of GO:0010891
  * Added general dbxref GOC:dph to synonym negative regulation of triacylglycerol sequestration of GO:0010891
  * Changed synonym scope of GO:0010891 from "Related" to "Exact"
  * Copied GO:0010891 to GO:0010889 with type OBO_REL:is_a
  * Copied GO:0010891 to GO:0030730 with type negatively_regulates
  * Copied GO:0010891 to GO:0010888 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010891
* Populated new object GO:0010892 (macro)
  * Changed name of GO:0010892 from "<new term>" to "positive regulation of mitochondrial translation in response to stress"
  * Set definition of GO:0010892 to "Any process that activates or increases the frequency, rate or extent of mitochondrial translation as a result of a stimulus indicating the organism is under stress."
  * Added definition dbxref GOC:dph to GO:0010892
  * Added definition dbxref GOC:jp to GO:0010892
  * Added definition dbxref GOC:tb to GO:0010892
  * Added definition dbxref PMID:8830768 to GO:0010892
  * Copied GO:0010892 to GO:0070131 with type OBO_REL:is_a
  * Copied GO:0010892 to GO:0032056 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010892
* Populated new object GO:0060417 (macro)
  * Changed name of GO:0060417 from "<new term>" to "yolk"
  * Set definition of GO:0060417 to "The cytoplasmic part that serves as a nutrient reserve or energy source for the developing embryo."
  * Added definition dbxref GOC:dph to GO:0060417
  * Added definition dbxref GOC:tb to GO:0060417
  * Added definition dbxref PMID:18046696 to GO:0060417
  * Copied GO:0060417 to GO:0044444 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0060417
* Populated new object GO:0060418 (macro)
  * Changed name of GO:0060418 from "<new term>" to "yolk plasma"
  * Set definition of GO:0060418 to "Discrete structures that partition the water-soluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed."
  * Added definition dbxref GOC:dph to GO:0060418
  * Added definition dbxref GOC:tb to GO:0060418
  * Added definition dbxref PMID:18046696 to GO:0060418
  * Copied GO:0060418 to GO:0060417 with type part_of
  * Copied GO:0060418 to GO:0044444 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0060418
* Populated new object GO:0060419 (macro)
  * Changed name of GO:0060419 from "<new term>" to "heart growth"
  * Set definition of GO:0060419 to "The increase in size or mass of the heart."
  * Added definition dbxref GOC:dph to GO:0060419
  * Added definition dbxref GOC:tb to GO:0060419
  * Copied GO:0060419 to GO:0035265 with type OBO_REL:is_a
  * Copied GO:0060419 to GO:0007507 with type part_of
  * Copied GO:0060419 to GO:0048589 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060419
* Populated new object GO:0060420 (macro)
  * Changed name of GO:0060420 from "<new term>" to "regulation of heart growth"
  * Set definition of GO:0060420 to "Any process that modulates the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart."
  * Added definition dbxref GOC:dph to GO:0060420
  * Added definition dbxref GOC:tb to GO:0060420
  * Copied GO:0060420 to GO:0060419 with type regulates
  * Copied GO:0060420 to GO:0046620 with type OBO_REL:is_a
  * Copied GO:0060420 to GO:0048638 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060420
* Populated new object GO:0060421 (macro)
  * Changed name of GO:0060421 from "<new term>" to "positive regulation of heart growth"
  * Set definition of GO:0060421 to "Any process that increases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart."
  * Added definition dbxref GOC:dph to GO:0060421
  * Added definition dbxref GOC:tb to GO:0060421
  * Copied GO:0060421 to GO:0046622 with type OBO_REL:is_a
  * Copied GO:0060421 to GO:0048639 with type OBO_REL:is_a
  * Copied GO:0060421 to GO:0060419 with type positively_regulates
  * Copied GO:0060421 to GO:0060420 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0060421
* Populated new object GO:0070283 (macro)
  * Changed name of GO:0070283 from "<new term>" to "radical SAM enzyme activity"
  * Set definition of GO:0070283 to "Catalysis of a reaction in which S-adenosyl-L-methionine (SAM) undergoes reductive cleavage to serve as a source of the 5'-deoxyadenosyl radical."
  * Added definition dbxref PMID:17291766 to GO:0070283
  * Added definition dbxref PMID:18307109 to GO:0070283
  * Copied GO:0070283 to GO:0003824 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070283
* Populated new object GO:0070284 (macro)
  * Changed name of GO:0070284 from "<new term>" to "4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase activity"
  * Set definition of GO:0070284 to "Catalysis of the reaction: 5-aminoimidazole ribonucleotide (AIR) + S-adenosylmethionine (SAM) = 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P) + 5'deoxyadenosine (5-dAdo)."
  * Added definition dbxref PMID:18953358 to GO:0070284
  * Added synonym "HMP-P synthase activity" to GO:0070284
  * Added general dbxref PMID:18953358 to synonym HMP-P synthase activity of GO:0070284
  * Changed synonym scope of GO:0070284 from "Related" to "Exact"
  * Added synonym "ThiC" to GO:0070284
  * Added general dbxref PMID:18953358 to synonym ThiC of GO:0070284
  * Copied GO:0070284 to GO:0070283 with type OBO_REL:is_a
  * Copied GO:0070284 to GO:0016853 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070284
* Populated new object GO:0070285 (macro)
  * Changed name of GO:0070285 from "<new term>" to "pigment cell development"
  * Set definition of GO:0070285 to "The process whose specific outcome is the progression of a pigmen cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate."
  * Added definition dbxref GOC:cvs to GO:0070285
  * Copied GO:0070285 to GO:0048468 with type OBO_REL:is_a
  * Copied GO:0070285 to GO:0050931 with type part_of
  * Assigned namespace "biological_process" to GO:0070285
* Populated new object GO:0070286 (macro)
  * Changed name of GO:0070286 from "<new term>" to "axonemal dynein complex assembly"
  * Set definition of GO:0070286 to "The aggregation, arrangement and bonding together of a set of components to form an axonemal dynein complex, a dynein complex found in eukaryotic cilia and flagella, in which the motor domain heads interact with adjacent microtubules to generate a sliding force which is converted to a bending motion."
  * Added definition dbxref GOC:mah to GO:0070286
  * Added definition dbxref PMID:19052621 to GO:0070286
  * Copied GO:0070286 to GO:0043623 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070286
* Populated new object GO:0070287 (macro)
  * Changed name of GO:0070287 from "<new term>" to "ferritin receptor activity"
  * Set definition of GO:0070287 to "Combining with ferritin, an iron-storing protein complex, to initiate a change in cell activity."
  * Added definition dbxref GOC:mah to GO:0070287
  * Added definition dbxref PMID:17459943 to GO:0070287
  * Added definition dbxref PMID:19154717 to GO:0070287
  * Added synonym "ferritin complex receptor activity" to GO:0070287
  * Added general dbxref GOC:mah to synonym ferritin complex receptor activity of GO:0070287
  * Changed synonym scope of GO:0070287 from "Related" to "Exact"
  * Copied GO:0070287 to GO:0004888 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070287
* Populated new object GO:0070288 (macro)
  * Changed name of GO:0070288 from "<new term>" to "ferritin complex"
  * Set definition of GO:0070288 to "A protein complex that binds iron and acts as a major iron storage system. Intracellular and extracellular ferritin complexes have different ratios of two types of ferritin monomer, the L (light) chain and H (heavy) chain."
  * Added definition dbxref GOC:mah to GO:0070288
  * Added definition dbxref PMID:19154717 to GO:0070288
  * Copied GO:0070288 to GO:0043234 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0070288
* Populated new object GO:0070289 (macro)
  * Changed name of GO:0070289 from "<new term>" to "extracellular ferritin complex"
  * Set definition of GO:0070289 to "A ferritin complex located in the extracellular region. Extracellular ferritin complexes contain L (light) chains but few or no H (heavy) chains."
  * Added definition dbxref GOC:mah to GO:0070289
  * Added definition dbxref PMID:19154717 to GO:0070289
  * Added synonym "serum ferritin complex" to GO:0070289
  * Added general dbxref PMID:19154717 to synonym serum ferritin complex of GO:0070289
  * Copied GO:0070289 to GO:0044421 with type OBO_REL:is_a
  * Copied GO:0070289 to GO:0070288 with type OBO_REL:is_a
  * Assigned namespace "cellular_component" to GO:0070289
* Populated new object GO:0070290 (macro)
  * Changed name of GO:0070290 from "<new term>" to "NAPE-specific phospholipase D activity"
  * Set definition of GO:0070290 to "Catalysis of the release of N-acylethanolamine from N-acyl-phosphatidylethanolamine (NAPE) to generate N-acylethanolamine (NAE)."
  * Added definition dbxref GOC:elh to GO:0070290
  * Added definition dbxref PMID:14634025 to GO:0070290
  * Added definition dbxref PMID:15878693 to GO:0070290
  * Added general dbxref EC:3.1.4.4 to GO:0070290
  * Added general dbxref MetaCyc:PHOSPHOLIPASE-D-RXN to GO:0070290
  * Copied GO:0070290 to GO:0004620 with type OBO_REL:is_a
  * Copied GO:0070290 to GO:0008081 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070290
* Populated new object GO:0070291 (macro)
  * Changed name of GO:0070291 from "<new term>" to "N-acylethanolamine metabolic process"
  * Set definition of GO:0070291 to "The chemical reactions and pathways involving N-acylethanolamines."
  * Added definition dbxref GOC:elh to GO:0070291
  * Added definition dbxref PMID:14634025 to GO:0070291
  * Added definition dbxref PMID:15878693 to GO:0070291
  * Added synonym "N-acylethanolamine metabolism" to GO:0070291
  * Added general dbxref PMID:14634025 to synonym N-acylethanolamine metabolism of GO:0070291
  * Added general dbxref GOC:elh to synonym N-acylethanolamine metabolism of GO:0070291
  * Added general dbxref PMID:15877693 to synonym N-acylethanolamine metabolism of GO:0070291
  * Changed synonym scope of GO:0070291 from "Related" to "Exact"
  * Added synonym "NAE metabolic process" to GO:0070291
  * Added general dbxref PMID:14634025 to synonym NAE metabolic process of GO:0070291
  * Added general dbxref GOC:elh to synonym NAE metabolic process of GO:0070291
  * Added general dbxref PMID:15877693 to synonym NAE metabolic process of GO:0070291
  * Changed synonym scope of GO:0070291 from "Related" to "Exact"
  * Added synonym "NAE metabolism" to GO:0070291
  * Added general dbxref PMID:14634025 to synonym NAE metabolism of GO:0070291
  * Added general dbxref GOC:elh to synonym NAE metabolism of GO:0070291
  * Added general dbxref PMID:15877693 to synonym NAE metabolism of GO:0070291
  * Changed synonym scope of GO:0070291 from "Related" to "Exact"
  * Copied GO:0070291 to GO:0006580 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070291
* Populated new object GO:0070292 (macro)
  * Changed name of GO:0070292 from "<new term>" to "N-acylphosphatidylethanolamine metabolic process"
  * Set definition of GO:0070292 to "The chemical reactions and pathways involving N-acylethanolamines."
  * Added definition dbxref GOC:elh to GO:0070292
  * Added definition dbxref PMID:14634025 to GO:0070292
  * Added definition dbxref PMID:15878693 to GO:0070292
  * Added synonym "N-acylphosphatidylethanolamine metabolism" to GO:0070292
  * Added general dbxref PMID:14634025 to synonym N-acylphosphatidylethanolamine metabolism of GO:0070292
  * Added general dbxref GOC:elh to synonym N-acylphosphatidylethanolamine metabolism of GO:0070292
  * Added general dbxref PMID:15877693 to synonym N-acylphosphatidylethanolamine metabolism of GO:0070292
  * Changed synonym scope of GO:0070292 from "Related" to "Exact"
  * Added synonym "NAPE metabolic process" to GO:0070292
  * Added general dbxref PMID:14634025 to synonym NAPE metabolic process of GO:0070292
  * Added general dbxref GOC:elh to synonym NAPE metabolic process of GO:0070292
  * Added general dbxref PMID:15877693 to synonym NAPE metabolic process of GO:0070292
  * Changed synonym scope of GO:0070292 from "Related" to "Exact"
  * Added synonym "NAPE metabolism" to GO:0070292
  * Added general dbxref PMID:14634025 to synonym NAPE metabolism of GO:0070292
  * Added general dbxref GOC:elh to synonym NAPE metabolism of GO:0070292
  * Added general dbxref PMID:15877693 to synonym NAPE metabolism of GO:0070292
  * Changed synonym scope of GO:0070292 from "Related" to "Exact"
  * Copied GO:0070292 to GO:0046337 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070292
* Populated new object GO:0070293 (macro)
  * Changed name of GO:0070293 from "<new term>" to "renal absorption"
  * Set definition of GO:0070293 to "A renal system process by which water, ions, and glucose are taken up from the collecting ducts and proximal and distal loops of the nephron."
  * Added definition dbxref GOC:dph to GO:0070293
  * Added definition dbxref GOC:mah to GO:0070293
  * Added synonym "nephron absorption" to GO:0070293
  * Added general dbxref GOC:mah to synonym nephron absorption of GO:0070293
  * Changed synonym scope of GO:0070293 from "Related" to "Exact"
  * Added synonym "renal reabsorption" to GO:0070293
  * Added general dbxref GOC:dph to synonym renal reabsorption of GO:0070293
  * Changed synonym scope of GO:0070293 from "Related" to "Exact"
  * Copied GO:0070293 to GO:0003014 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070293
* Populated new object GO:0070294 (macro)
  * Changed name of GO:0070294 from "<new term>" to "renal sodium ion absorption"
  * Set definition of GO:0070294 to "A renal system process by which sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron."
  * Added definition dbxref GOC:dph to GO:0070294
  * Added definition dbxref GOC:mah to GO:0070294
  * Added synonym "nephron sodium ion absorption" to GO:0070294
  * Added general dbxref GOC:mah to synonym nephron sodium ion absorption of GO:0070294
  * Changed synonym scope of GO:0070294 from "Related" to "Exact"
  * Added synonym "renal sodium ion reabsorption" to GO:0070294
  * Added general dbxref GOC:dph to synonym renal sodium ion reabsorption of GO:0070294
  * Changed synonym scope of GO:0070294 from "Related" to "Exact"
  * Copied GO:0070294 to GO:0003096 with type OBO_REL:is_a
  * Copied GO:0070294 to GO:0070293 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070294
* Populated new object GO:0070295 (macro)
  * Changed name of GO:0070295 from "<new term>" to "renal water absorption"
  * Set definition of GO:0070295 to "A renal system process by which water is taken up from the collecting ducts and proximal and distal loops of the nephron."
  * Added definition dbxref GOC:dph to GO:0070295
  * Added definition dbxref GOC:mah to GO:0070295
  * Added synonym "nephron water absorption" to GO:0070295
  * Added general dbxref GOC:mah to synonym nephron water absorption of GO:0070295
  * Changed synonym scope of GO:0070295 from "Related" to "Exact"
  * Added synonym "renal watern reabsorption" to GO:0070295
  * Added general dbxref GOC:dph to synonym renal watern reabsorption of GO:0070295
  * Changed synonym scope of GO:0070295 from "Related" to "Exact"
  * Copied GO:0070295 to GO:0003097 with type OBO_REL:is_a
  * Copied GO:0070295 to GO:0070293 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070295
* Added definition dbxref PMID:18307109 to GO:0004076
* Copied GO:0004076 to GO:0070283 with type OBO_REL:is_a
* Changed definition of GO:0005858 from "A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains." to "A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which is converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains."
* Changed definition of GO:0005903 from "Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell." to "Dense covering of microvilli on the apical surface of epithelial cells in tissues such as the intestine, kidney, and choroid plexus; the microvilli aid absorption by increasing the surface area of the cell."
* Added definition dbxref GOC:sl to GO:0005903
* Changed definition of GO:0006855 from "The directed movement of drugs into, out of, within or between cells." to "The directed movement of drugs across a membrane into, out of, within or between cells."
* Copied GO:0006855 to GO:0055085 with type OBO_REL:is_a
* Changed name of GO:0008043 from "ferritin complex" to "intracellular ferritin complex"
* Changed definition of GO:0008043 from "A iron-storing protein complex, which in humans has 24 subunits. There are two different ferritin subunits, the L (light) chain and H (heavy) chain." to "A ferritin complex located in the cell. Intracellular ferritin complexes contain 24 subunits, in a mixture of L (light) chains and H (heavy) chains."
* Deleted definition dbxref UniProtKB:P02792 from GO:0008043
* Added definition dbxref GOC:mah to GO:0008043
* Added definition dbxref PMID:19154717 to GO:0008043
* Deleted GO:0008043 --OBO_REL:is_a--> GO:0043234
* Copied GO:0008043 to GO:0070288 with type OBO_REL:is_a
* Added synonym "cholesterol sequestration" to GO:0010878
* Added general dbxref GOC:tb to synonym cholesterol sequestration of GO:0010878
* Added general dbxref GOC:dph to synonym cholesterol sequestration of GO:0010878
* Changed synonym scope of GO:0010878 from "Related" to "Narrow"
* Added synonym "sequestration of cholesterol" to GO:0010878
* Added general dbxref GOC:tb to synonym sequestration of cholesterol of GO:0010878
* Added general dbxref GOC:dph to synonym sequestration of cholesterol of GO:0010878
* Changed synonym scope of GO:0010878 from "Related" to "Narrow"
* Changed name of GO:0014723 from "regulation of skeletal muscle contraction via modulation of calcium ion sensitivity of myofibril" to "regulation of skeletal muscle contraction by modulation of calcium ion sensitivity of myofibril"
* Changed name of GO:0014809 from "regulation of skeletal muscle contraction via regulation of the release of sequestered calcium ion" to "regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion"
* Deleted GO:0014809 --part_of--> GO:0014808
* Copied GO:0014809 to GO:0010880 with type OBO_REL:is_a
* Changed name of GO:0014810 from "positive regulation of skeletal muscle contraction via regulation of the release of sequestered calcium ion" to "positive regulation of skeletal muscle contraction by regulation of the release of sequestered calcium ion"
* Changed name of GO:0014811 from "negative regulation of skeletal muscle contraction via regulation of the release of sequestered calcium ion" to "negative regulation of skeletal muscle contraction by regulation of the release of sequestered calcium ion"
* Added definition dbxref PMID:18307109 to GO:0016992
* Copied GO:0016992 to GO:0070283 with type OBO_REL:is_a
* Changed name of GO:0031583 from "G-protein signaling, phospholipase D activating pathway" to "activation of phospholipase D activity by G-protein coupled receptor protein signaling pathway"
* Copied GO:0031583 to GO:0031584 with type OBO_REL:is_a
* Changed name of GO:0031584 from "phospholipase D activation" to "activation of phospholipase D activity"
* Changed definition of GO:0031584 from "The series of molecular signals that results in the upregulation of phospholipase D activity in response to the initial signal." to "Any process that initiates the activity of inactive phospholipase D."
* Added definition dbxref GOC:dph to GO:0031584
* Added definition dbxref GOC:tb to GO:0031584
* Deleted GO:0031584 --OBO_REL:is_a--> GO:0031583
* Copied GO:0031584 to GO:0010518 with type OBO_REL:is_a
* Changed definition of GO:0042718 from "Discrete structures that partition the yolk of oocytes and ova, which may or may not be membrane enclosed." to "Discrete structures that partition the water-insoluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed."
* Added definition dbxref PMID:18046696 to GO:0042718
* Copied GO:0042718 to GO:0060417 with type part_of
* Added definition dbxref PMID:18307109 to GO:0043365
* Copied GO:0043365 to GO:0070283 with type OBO_REL:is_a
* Copied GO:0043634 to GO:0034661 with type OBO_REL:is_a
* Added definition dbxref PMID:18307109 to GO:0046405
* Copied GO:0046405 to GO:0070283 with type OBO_REL:is_a
* Added definition dbxref PMID:18307109 to GO:0050066
* Copied GO:0050066 to GO:0070283 with type OBO_REL:is_a
* Copied GO:0055017 to GO:0060419 with type part_of


More information about the Go-diff mailing list