[Go-diff] GO update 02/19/2009
Remote CVS for Gene Ontology
gocvs at genome.stanford.edu
Thu Feb 19 21:30:48 PST 2009
OBODIFF of gene_ontology_write.obo version 1.449 by 1.451
Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0002134
* Created object of type obo:TERM with id GO:0002135
* Created object of type obo:TERM with id GO:0070389
* Created object of type obo:TERM with id GO:0070390
* Created object of type obo:TERM with id GO:0070391
* Created object of type obo:TERM with id GO:0070392
* Created object of type obo:TERM with id GO:0070393
* Created object of type obo:TERM with id GO:0070394
* Created object of type obo:TERM with id GO:0070395
* Created object of type obo:TERM with id GO:0070396
* Created object of type obo:TERM with id GO:0070397
* Created object of type obo:TERM with id GO:0070398
* Created object of type obo:TERM with id GO:0070399
* Created object of type obo:TERM with id GO:0070400
* Created object of type obo:TERM with id GO:0070401
* Created object of type obo:TERM with id GO:0070402
* Created object of type obo:TERM with id GO:0070403
* Created object of type obo:TERM with id GO:0070404
* Created object of type obo:TERM with id GO:0070405
* Created object of type obo:TERM with id GO:0070406
* Created object of type obo:TERM with id GO:0070407
* Populated new object GO:0002134 (macro)
* Changed name of GO:0002134 from "<new term>" to "UTP binding"
* Set definition of GO:0002134 to "Interacting selectively with UTP, uridine 5'-triphosphate."
* Added definition dbxref GOC:hjd to GO:0002134
* Added definition dbxref Oxford Dictionary (ISBN:0198506732) to GO:0002134
* Copied GO:0002134 to GO:0032557 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0002134
* Populated new object GO:0002135 (macro)
* Changed name of GO:0002135 from "<new term>" to "CTP binding"
* Set definition of GO:0002135 to "Interacting selectively with CTP, cytidine 5'-triphosphate."
* Added definition dbxref GOC:hjd to GO:0002135
* Added definition dbxref The Anatomical Basis of Mouse Development (ISBN:0124020607) to GO:0002135
* Copied GO:0002135 to GO:0032557 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0002135
* Populated new object GO:0070389 (macro)
* Changed name of GO:0070389 from "<new term>" to "chaperone cofactor-dependent protein refolding"
* Set definition of GO:0070389 to "The process of assisting in the restoration of the biological activity of an unfolded or misfolded protein, which is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release."
* Added definition dbxref GOC:mah to GO:0070389
* Added definition dbxref GOC:rb to GO:0070389
* Added GO:0070389 to category gosubset_prok
* Added synonym "chaperone co-factor-dependent protein refolding" to GO:0070389
* Changed synonym scope of GO:0070389 from "Related" to "Exact"
* Copied GO:0070389 to GO:0042026 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070389
* Populated new object GO:0070390 (macro)
* Changed name of GO:0070390 from "<new term>" to "transcription export complex 2"
* Set definition of GO:0070390 to "A protein complex that couples SAGA-dependent gene expression to mRNA export at the inner side of the nuclear pore complex (NPC). The TREX-2 complex is tethered to the inner side of the NPC via the nucleoporins Nup1 and Nup60; in S. cerevisiae it contains Sac3p, Thp1p, Sus1p and Cdc31p."
* Added definition dbxref GOC:df to GO:0070390
* Added definition dbxref GOC:mah to GO:0070390
* Added definition dbxref PMID:17786152 to GO:0070390
* Added synonym "Sac3-Thp1-Sus1-Cdc31 complex" to GO:0070390
* Added general dbxref PMID:17786152 to synonym Sac3-Thp1-Sus1-Cdc31 complex of GO:0070390
* Changed synonym scope of GO:0070390 from "Related" to "Exact"
* Added synonym "TREX-2 complex" to GO:0070390
* Added general dbxref GOC:df to synonym TREX-2 complex of GO:0070390
* Changed synonym scope of GO:0070390 from "Related" to "Exact"
* Copied GO:0070390 to GO:0043234 with type OBO_REL:is_a
* Copied GO:0070390 to GO:0044428 with type OBO_REL:is_a
* Assigned namespace "cellular_component" to GO:0070390
* Populated new object GO:0070391 (macro)
* Changed name of GO:0070391 from "<new term>" to "response to lipoteichoic acid"
* Set definition of GO:0070391 to "A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipoteichoic acid stimulus; lipoteichoic acid is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor."
* Added definition dbxref GOC:add to GO:0070391
* Added definition dbxref PMID:14665680 to GO:0070391
* Added definition dbxref PMID:16020688 to GO:0070391
* Added synonym "response to LTA" to GO:0070391
* Added general dbxref GOC:add to synonym response to LTA of GO:0070391
* Changed synonym scope of GO:0070391 from "Related" to "Exact"
* Copied GO:0070391 to GO:0002237 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070391
* Populated new object GO:0070392 (macro)
* Changed name of GO:0070392 from "<new term>" to "detection of lipoteichoic acid"
* Set definition of GO:0070392 to "The series of events in which a lipoteichoic acid stimulus is received by a cell and converted into a molecular signal; lipoteichoic acid is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor."
* Added definition dbxref GOC:add to GO:0070392
* Added definition dbxref PMID:14665680 to GO:0070392
* Added definition dbxref PMID:16020688 to GO:0070392
* Added synonym "detection of LTA" to GO:0070392
* Added general dbxref GOC:add to synonym detection of LTA of GO:0070392
* Changed synonym scope of GO:0070392 from "Related" to "Exact"
* Copied GO:0070392 to GO:0032490 with type OBO_REL:is_a
* Copied GO:0070392 to GO:0070391 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070392
* Populated new object GO:0070393 (macro)
* Changed name of GO:0070393 from "<new term>" to "teichoic acid catabolic process"
* Set definition of GO:0070393 to "The chemical reactions and pathways resulting in the breakdown of teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues."
* Added definition dbxref GOC:add to GO:0070393
* Added definition dbxref PMID:14665680 to GO:0070393
* Added synonym "teichoic acid breakdown" to GO:0070393
* Added general dbxref GOC:add to synonym teichoic acid breakdown of GO:0070393
* Changed synonym scope of GO:0070393 from "Related" to "Exact"
* Added synonym "teichoic acid catabolism" to GO:0070393
* Added general dbxref GOC:add to synonym teichoic acid catabolism of GO:0070393
* Changed synonym scope of GO:0070393 from "Related" to "Exact"
* Added synonym "teichoic acid degradation" to GO:0070393
* Added general dbxref GOC:add to synonym teichoic acid degradation of GO:0070393
* Changed synonym scope of GO:0070393 from "Related" to "Exact"
* Copied GO:0070393 to GO:0046374 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070393
* Populated new object GO:0070394 (macro)
* Changed name of GO:0070394 from "<new term>" to "lipoteichoic acid metabolic process"
* Set definition of GO:0070394 to "The chemical reactions and pathways involving lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor."
* Added definition dbxref GOC:add to GO:0070394
* Added definition dbxref PMID:14665680 to GO:0070394
* Added definition dbxref PMID:16020688 to GO:0070394
* Added synonym "lipoteichoic acid metabolism" to GO:0070394
* Added general dbxref GOC:add to synonym lipoteichoic acid metabolism of GO:0070394
* Changed synonym scope of GO:0070394 from "Related" to "Exact"
* Added synonym "LTA metabolic process" to GO:0070394
* Added general dbxref GOC:add to synonym LTA metabolic process of GO:0070394
* Changed synonym scope of GO:0070394 from "Related" to "Exact"
* Copied GO:0070394 to GO:0046374 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070394
* Populated new object GO:0070395 (macro)
* Changed name of GO:0070395 from "<new term>" to "lipoteichoic acid biosynthetic process"
* Set definition of GO:0070395 to "The chemical reactions and pathways resulting in the formation of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor."
* Added definition dbxref GOC:add to GO:0070395
* Added definition dbxref PMID:14665680 to GO:0070395
* Added definition dbxref PMID:16020688 to GO:0070395
* Added synonym "lipoteichoic acid anabolism" to GO:0070395
* Added general dbxref GOC:add to synonym lipoteichoic acid anabolism of GO:0070395
* Changed synonym scope of GO:0070395 from "Related" to "Exact"
* Added synonym "lipoteichoic acid biosynthesis" to GO:0070395
* Added general dbxref GOC:add to synonym lipoteichoic acid biosynthesis of GO:0070395
* Changed synonym scope of GO:0070395 from "Related" to "Exact"
* Added synonym "LTA biosynthetic process" to GO:0070395
* Added general dbxref GOC:add to synonym LTA biosynthetic process of GO:0070395
* Changed synonym scope of GO:0070395 from "Related" to "Broad"
* Copied GO:0070395 to GO:0070394 with type OBO_REL:is_a
* Copied GO:0070395 to GO:0019350 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070395
* Populated new object GO:0070396 (macro)
* Changed name of GO:0070396 from "<new term>" to "lipoteichoic acid catabolic process"
* Set definition of GO:0070396 to "The chemical reactions and pathways resulting in the breakdown of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor."
* Added definition dbxref GOC:add to GO:0070396
* Added definition dbxref PMID:14665680 to GO:0070396
* Added synonym "lipoteichoic acid breakdown" to GO:0070396
* Added general dbxref GOC:add to synonym lipoteichoic acid breakdown of GO:0070396
* Changed synonym scope of GO:0070396 from "Related" to "Exact"
* Added synonym "lipoteichoic acid catabolism" to GO:0070396
* Added general dbxref GOC:add to synonym lipoteichoic acid catabolism of GO:0070396
* Changed synonym scope of GO:0070396 from "Related" to "Exact"
* Added synonym "lipoteichoic acid degradation" to GO:0070396
* Added general dbxref GOC:add to synonym lipoteichoic acid degradation of GO:0070396
* Changed synonym scope of GO:0070396 from "Related" to "Exact"
* Copied GO:0070396 to GO:0046374 with type OBO_REL:is_a
* Copied GO:0070396 to GO:0070394 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070396
* Populated new object GO:0070397 (macro)
* Changed name of GO:0070397 from "<new term>" to "wall teichoic acid metabolic process"
* Set definition of GO:0070397 to "The chemical reactions and pathways involving wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan."
* Added definition dbxref GOC:add to GO:0070397
* Added definition dbxref PMID:14665680 to GO:0070397
* Added definition dbxref PMID:16020688 to GO:0070397
* Added synonym "wall teichoic acid metabolism" to GO:0070397
* Added general dbxref GOC:add to synonym wall teichoic acid metabolism of GO:0070397
* Changed synonym scope of GO:0070397 from "Related" to "Exact"
* Added synonym "WTA metabolic process" to GO:0070397
* Added general dbxref GOC:add to synonym WTA metabolic process of GO:0070397
* Changed synonym scope of GO:0070397 from "Related" to "Exact"
* Copied GO:0070397 to GO:0046374 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070397
* Populated new object GO:0070398 (macro)
* Changed name of GO:0070398 from "<new term>" to "wall teichoic acid biosynthetic process"
* Set definition of GO:0070398 to "The chemical reactions and pathways resulting in the formation of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan."
* Added definition dbxref GOC:add to GO:0070398
* Added definition dbxref PMID:14665680 to GO:0070398
* Added definition dbxref PMID:16020688 to GO:0070398
* Added synonym "wall teichoic acid anabolism" to GO:0070398
* Added general dbxref GOC:add to synonym wall teichoic acid anabolism of GO:0070398
* Changed synonym scope of GO:0070398 from "Related" to "Exact"
* Added synonym "wall teichoic acid biosynthesis" to GO:0070398
* Added general dbxref GOC:add to synonym wall teichoic acid biosynthesis of GO:0070398
* Changed synonym scope of GO:0070398 from "Related" to "Exact"
* Added synonym "WTA biosynthetic process" to GO:0070398
* Added general dbxref GOC:add to synonym WTA biosynthetic process of GO:0070398
* Changed synonym scope of GO:0070398 from "Related" to "Exact"
* Copied GO:0070398 to GO:0019350 with type OBO_REL:is_a
* Copied GO:0070398 to GO:0070397 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070398
* Populated new object GO:0070399 (macro)
* Changed name of GO:0070399 from "<new term>" to "wall teichoic acid catabolic process"
* Set definition of GO:0070399 to "The chemical reactions and pathways resulting in the breakdown of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan."
* Added definition dbxref GOC:add to GO:0070399
* Added definition dbxref PMID:14665680 to GO:0070399
* Added synonym "wall teichoic acid breakdown" to GO:0070399
* Added general dbxref GOC:add to synonym wall teichoic acid breakdown of GO:0070399
* Changed synonym scope of GO:0070399 from "Related" to "Exact"
* Added synonym "wall teichoic acid catabolism" to GO:0070399
* Added general dbxref GOC:add to synonym wall teichoic acid catabolism of GO:0070399
* Changed synonym scope of GO:0070399 from "Related" to "Exact"
* Added synonym "wall teichoic acid degradation" to GO:0070399
* Added general dbxref GOC:add to synonym wall teichoic acid degradation of GO:0070399
* Changed synonym scope of GO:0070399 from "Related" to "Exact"
* Copied GO:0070399 to GO:0070397 with type OBO_REL:is_a
* Copied GO:0070399 to GO:0046374 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070399
* Populated new object GO:0070400 (macro)
* Changed name of GO:0070400 from "<new term>" to "teichoic acid D-alanylation"
* Set definition of GO:0070400 to "The formation of a D-alanyl ester of teichoic acid. Alanylation of teichoic acids modulates the properties of the bacterial cell wall and modulates the inflammatory properties of the teichoic acid."
* Added definition dbxref GOC:add to GO:0070400
* Added definition dbxref PMID:14665680 to GO:0070400
* Added definition dbxref PMID:16020688 to GO:0070400
* Added synonym "teichoic acid alanylation" to GO:0070400
* Added general dbxref GOC:add to synonym teichoic acid alanylation of GO:0070400
* Changed synonym scope of GO:0070400 from "Related" to "Exact"
* Copied GO:0070400 to GO:0019350 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070400
* Populated new object GO:0070401 (macro)
* Changed name of GO:0070401 from "<new term>" to "NADP binding"
* Set definition of GO:0070401 to "Interacting selectively with the oxidized form, NADP, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions."
* Added definition dbxref GOC:mah to GO:0070401
* Added synonym "NADP (oxidized) binding" to GO:0070401
* Added general dbxref GOC:mah to synonym NADP (oxidized) binding of GO:0070401
* Changed synonym scope of GO:0070401 from "Related" to "Exact"
* Added synonym "oxidized NADP binding" to GO:0070401
* Added general dbxref GOC:mah to synonym oxidized NADP binding of GO:0070401
* Changed synonym scope of GO:0070401 from "Related" to "Exact"
* Added synonym "oxidized nicotinamide adenine dinucleotide phosphate binding" to GO:0070401
* Added general dbxref GOC:mah to synonym oxidized nicotinamide adenine dinucleotide phosphate binding of GO:0070401
* Changed synonym scope of GO:0070401 from "Related" to "Exact"
* Copied GO:0070401 to GO:0050661 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070401
* Populated new object GO:0070402 (macro)
* Changed name of GO:0070402 from "<new term>" to "NADPH binding"
* Set definition of GO:0070402 to "Interacting selectively with the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions."
* Added definition dbxref GOC:mah to GO:0070402
* Added synonym "NADP (reduced) binding" to GO:0070402
* Added general dbxref GOC:mah to synonym NADP (reduced) binding of GO:0070402
* Changed synonym scope of GO:0070402 from "Related" to "Exact"
* Added synonym "reduced NADP binding" to GO:0070402
* Added general dbxref GOC:mah to synonym reduced NADP binding of GO:0070402
* Changed synonym scope of GO:0070402 from "Related" to "Exact"
* Added synonym "reduced nicotinamide adenine dinucleotide phosphate binding" to GO:0070402
* Added general dbxref GOC:mah to synonym reduced nicotinamide adenine dinucleotide phosphate binding of GO:0070402
* Changed synonym scope of GO:0070402 from "Related" to "Exact"
* Copied GO:0070402 to GO:0050661 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070402
* Populated new object GO:0070403 (macro)
* Changed name of GO:0070403 from "<new term>" to "NAD binding"
* Set definition of GO:0070403 to "Interacting selectively with the oxidized form, NAD, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions."
* Added definition dbxref GOC:mah to GO:0070403
* Added synonym "NAD (oxidized) binding" to GO:0070403
* Added general dbxref GOC:mah to synonym NAD (oxidized) binding of GO:0070403
* Changed synonym scope of GO:0070403 from "Related" to "Exact"
* Added synonym "oxidized NAD binding" to GO:0070403
* Added general dbxref GOC:mah to synonym oxidized NAD binding of GO:0070403
* Changed synonym scope of GO:0070403 from "Related" to "Exact"
* Added synonym "oxidized nicotinamide adenine dinucleotide binding" to GO:0070403
* Added general dbxref GOC:mah to synonym oxidized nicotinamide adenine dinucleotide binding of GO:0070403
* Changed synonym scope of GO:0070403 from "Related" to "Exact"
* Copied GO:0070403 to GO:0051287 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070403
* Populated new object GO:0070404 (macro)
* Changed name of GO:0070404 from "<new term>" to "NADH binding"
* Set definition of GO:0070404 to "Interacting selectively with the reduced form, NADH, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions."
* Added definition dbxref GOC:mah to GO:0070404
* Added synonym "NAD (reduced) binding" to GO:0070404
* Added general dbxref GOC:mah to synonym NAD (reduced) binding of GO:0070404
* Changed synonym scope of GO:0070404 from "Related" to "Exact"
* Added synonym "NADH binding" to GO:0070404
* Added general dbxref GOC:mah to synonym NADH binding of GO:0070404
* Changed synonym scope of GO:0070404 from "Related" to "Exact"
* Added synonym "reduced NAD binding" to GO:0070404
* Added general dbxref GOC:mah to synonym reduced NAD binding of GO:0070404
* Changed synonym scope of GO:0070404 from "Related" to "Exact"
* Added synonym "reduced nicotinamide adenine dinucleotide binding" to GO:0070404
* Added general dbxref GOC:mah to synonym reduced nicotinamide adenine dinucleotide binding of GO:0070404
* Changed synonym scope of GO:0070404 from "Related" to "Exact"
* Copied GO:0070404 to GO:0051287 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070404
* Populated new object GO:0070405 (macro)
* Changed name of GO:0070405 from "<new term>" to "ammonium ion binding"
* Set definition of GO:0070405 to "Interacting selectively with ammonium ions (NH4+)."
* Added definition dbxref ChEBI:28938 to GO:0070405
* Added definition dbxref GOC:ecd to GO:0070405
* Copied GO:0070405 to GO:0043169 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070405
* Populated new object GO:0070406 (macro)
* Changed name of GO:0070406 from "<new term>" to "glutamine binding"
* Set definition of GO:0070406 to "Interacting selectively with glutamine, 2,5-diamino-5-oxopentanoic acid."
* Added definition dbxref ChEBI:28300 to GO:0070406
* Added definition dbxref GOC:ecd to GO:0070406
* Copied GO:0070406 to GO:0016597 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070406
* Populated new object GO:0070407 (macro)
* Changed name of GO:0070407 from "<new term>" to "oxidation-dependent protein catabolic process"
* Set definition of GO:0070407 to "The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the oxidation of one or more amino acid residues in the protein."
* Added definition dbxref GOC:mah to GO:0070407
* Added synonym "oxidation-dependent protein breakdown" to GO:0070407
* Added general dbxref GOC:mah to synonym oxidation-dependent protein breakdown of GO:0070407
* Changed synonym scope of GO:0070407 from "Related" to "Exact"
* Added synonym "oxidation-dependent protein catabolism" to GO:0070407
* Added general dbxref GOC:mah to synonym oxidation-dependent protein catabolism of GO:0070407
* Changed synonym scope of GO:0070407 from "Related" to "Exact"
* Added synonym "oxidation-dependent protein degradation" to GO:0070407
* Added general dbxref GOC:mah to synonym oxidation-dependent protein degradation of GO:0070407
* Changed synonym scope of GO:0070407 from "Related" to "Exact"
* Added synonym "oxidation-dependent proteolysis" to GO:0070407
* Added general dbxref GOC:mah to synonym oxidation-dependent proteolysis of GO:0070407
* Changed synonym scope of GO:0070407 from "Related" to "Exact"
* Added synonym "oxidized protein catabolic process" to GO:0070407
* Added general dbxref GOC:mah to synonym oxidized protein catabolic process of GO:0070407
* Changed synonym scope of GO:0070407 from "Related" to "Exact"
* Copied GO:0070407 to GO:0019941 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070407
* added secondary id GO:0016800 to GO:0004553
* Deleted definition dbxref EC:1.4.3.6 from GO:0008131
* Added definition dbxref EC:1.4.3.21 to GO:0008131
* Added definition dbxref EC:1.4.3.22 to GO:0008131
* Deleted general dbxref EC:1.4.3.6 from GO:0008131
* Added general dbxref EC:1.4.3.21 to GO:0008131
* Added general dbxref EC:1.4.3.22 to GO:0008131
* Deleted synonym "amine:oxygen oxidoreductase (deaminating) (copper-containing)" from GO:0008131
* Deleted general dbxref EC:1.4.3.6 from synonym Cu-amine oxidase activity of GO:0008131
* Added general dbxref EC:1.4.3.21 to synonym Cu-amine oxidase activity of GO:0008131
* Changed synonym scope of GO:0008131 from "Narrow" to "Related"
* Deleted general dbxref EC:1.4.3.6 from synonym diamine oxidase activity of GO:0008131
* Added general dbxref EC:1.4.3.22 to synonym diamine oxidase activity of GO:0008131
* Changed synonym scope of GO:0008131 from "Narrow" to "Related"
* Deleted synonym "diamine:O2 oxidoreductase (deaminating)" from GO:0008131
* Deleted general dbxref EC:1.4.3.6 from synonym histaminase activity of GO:0008131
* Added general dbxref EC:1.4.3.22 to synonym histaminase activity of GO:0008131
* Deleted general dbxref EC:1.4.3.6 from synonym histamine deaminase of GO:0008131
* Added general dbxref EC:1.4.3.21 to synonym histamine deaminase of GO:0008131
* Deleted general dbxref EC:1.4.3.6 from synonym histamine oxidase of GO:0008131
* Added general dbxref EC:1.4.3.21 to synonym histamine oxidase of GO:0008131
* Deleted general dbxref EC:1.4.3.6 from synonym semicarbazide-sensitive amine oxidase of GO:0008131
* Added general dbxref EC:1.4.3.22 to synonym semicarbazide-sensitive amine oxidase of GO:0008131
* added secondary id GO:0047210 to GO:0008466
* Added synonym "1,4alpha-glucan-protein synthase (UDP-forming) activity" to GO:0008466
* Changed synonym scope of GO:0008466 from "Related" to "Exact"
* Added synonym "alpha-1,4-glucan-protein synthase (UDP-forming) activity" to GO:0008466
* Changed synonym scope of GO:0008466 from "Related" to "Exact"
* Copied GO:0008466 to GO:0008194 with type OBO_REL:is_a
* Copied GO:0008466 to GO:0016758 with type OBO_REL:is_a
* Deleted general dbxref EC:1.6.4.- from GO:0008785
* Added general dbxref EC:1.8.1.- to GO:0008785
* Deleted GO:0008785 --OBO_REL:is_a--> GO:0016654
* Copied GO:0008785 to GO:0016668 with type OBO_REL:is_a
* Deleted GO:0016654 --OBO_REL:is_a--> GO:0016651
* Deleted GO:0008785 --OBO_REL:is_a--> GO:0016654
* Destroyed object GO:0016654
* added secondary id GO:0016654 to GO:0016668
* Added synonym "oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor" to GO:0016668
* Changed synonym scope of GO:0016668 from "Related" to "Exact"
* Added synonym "oxidoreductase activity, acting on NADH or NADPH, disulphide as acceptor" to GO:0016668
* Changed synonym scope of GO:0016668 from "Related" to "Exact"
* Copied GO:0016668 to GO:0016651 with type OBO_REL:is_a
* added secondary id GO:0016736 to GO:0016699
* added secondary id GO:0019110 to GO:0016699
* Copied GO:0016699 to GO:0016730 with type OBO_REL:is_a
* Deleted GO:0016777 --OBO_REL:is_a--> GO:0016853
* Destroyed object GO:0016777
* Deleted GO:0016800 --OBO_REL:is_a--> GO:0016798
* Deleted GO:0019137 --OBO_REL:is_a--> GO:0016800
* Destroyed object GO:0016800
* added secondary id GO:0016777 to GO:0016868
* Added synonym "phosphotransferase activity, with regeneration of donors, apparently catalyzing intramolecular transfers" to GO:0016868
* Changed synonym scope of GO:0016868 from "Related" to "Exact"
* Copied GO:0016868 to GO:0016853 with type OBO_REL:is_a
* Deleted GO:0018514 --OBO_REL:is_a--> GO:0016628
* Destroyed object GO:0018514
* Deleted GO:0019110 --OBO_REL:is_a--> GO:0016730
* Destroyed object GO:0019110
* Deleted GO:0019137 --OBO_REL:is_a--> GO:0016800
* Copied GO:0019137 to GO:0004553 with type OBO_REL:is_a
* added secondary id GO:0030765 to GO:0030753
* Added general dbxref MetaCyc:XANTHOTOXOL-O-METHYLTRANSFERASE-RXN to GO:0030753
* Added synonym "S-adenosyl-L-methionine:xanthotoxol O-methyltransferase activity" to GO:0030753
* Added general dbxref EC:2.1.1.70 to synonym S-adenosyl-L-methionine:xanthotoxol O-methyltransferase activity of GO:0030753
* Changed synonym scope of GO:0030753 from "Related" to "Exact"
* Added synonym "xanthotoxol methyltransferase activity" to GO:0030753
* Added general dbxref EC:2.1.1.70 to synonym xanthotoxol methyltransferase activity of GO:0030753
* Changed synonym scope of GO:0030753 from "Related" to "Exact"
* Added synonym "xanthotoxol O-methyltransferase activity" to GO:0030753
* Changed synonym scope of GO:0030753 from "Related" to "Exact"
* Deleted GO:0030765 --OBO_REL:is_a--> GO:0008757
* Destroyed object GO:0030765
* Deleted general dbxref EC:1.15.99.- from GO:0034877
* Added general dbxref EC:1.15.-.- to GO:0034877
* Deleted general dbxref EC:1.15.99.- from GO:0034878
* Added general dbxref EC:1.15.-.- to GO:0034878
* Deleted general dbxref EC:1.15.99.- from GO:0034880
* Added general dbxref EC:1.15.-.- to GO:0034880
* Changed synonym scope of GO:0042109 from "Exact" to "Broad"
* Changed synonym scope of GO:0042109 from "Exact" to "Broad"
* Changed definition of GO:0043592 from "The outer-most layer of a bacterial endospore, which is loosely attached and located outside of the endospore coat. It is generally composed of protein, carbohydrate, and perhaps lipid." to "The outermost layer of a bacterial endospore, which is loosely attached and located outside of the endospore coat. It is generally composed of protein, carbohydrate, and perhaps lipid."
* added secondary id GO:0018514 to GO:0047120
* Added general dbxref UM-BBD_enzymeID:e0108 to GO:0047120
* Added synonym "cis-4,5-dihydroxycyclohexa-1(6),2-diene-1,4-dicarboxylate:NAD+ oxidoreductase (decarboxylating)" to GO:0047120
* Added general dbxref EC:1.3.1.53 to synonym cis-4,5-dihydroxycyclohexa-1(6),2-diene-1,4-dicarboxylate:NAD+ oxidoreductase (decarboxylating) of GO:0047120
* Changed synonym scope of GO:0047120 from "Related" to "Exact"
* Added synonym "terephthalate 1,2-cis-dihydrodiol dehydrogenase activity" to GO:0047120
* Changed synonym scope of GO:0047120 from "Related" to "Exact"
* Deleted GO:0047210 --OBO_REL:is_a--> GO:0008194
* Deleted GO:0047210 --OBO_REL:is_a--> GO:0016758
* Destroyed object GO:0047210
* Deleted general dbxref EC:6.2.1.29 from GO:0047747
* Deleted general dbxref MetaCyc:6.2.1.29-RXN from GO:0047747
* Changed name of GO:0050661 from "NADP binding" to "NADP or NADPH binding"
* Deleted synonym "NADP (oxidized) binding" from GO:0050661
* Deleted synonym "NADP (reduced) binding" from GO:0050661
* Deleted synonym "NADPH binding" from GO:0050661
* Deleted synonym "oxidized NADP binding" from GO:0050661
* Deleted synonym "oxidized nicotinamide adenine dinucleotide phosphate binding" from GO:0050661
* Deleted synonym "reduced NADP binding" from GO:0050661
* Deleted synonym "reduced nicotinamide adenine dinucleotide phosphate binding" from GO:0050661
* Changed definition of GO:0051085 from "The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release." to "The process of assisting in the correct posttranslational noncovalent assembly of proteins, which is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release."
* Added synonym "chaperone cofactor-dependent 'de novo' protein folding" to GO:0051085
* Added general dbxref GOC:mah to synonym chaperone cofactor-dependent 'de novo' protein folding of GO:0051085
* Changed synonym scope of GO:0051085 from "Related" to "Exact"
* Changed name of GO:0051287 from "NAD binding" to "NAD or NADH binding"
* Deleted synonym "NAD (oxidized) binding" from GO:0051287
* Deleted synonym "NAD (reduced) binding" from GO:0051287
* Deleted synonym "NADH binding" from GO:0051287
* Deleted synonym "oxidized NAD binding" from GO:0051287
* Deleted synonym "oxidized nicotinamide adenine dinucleotide binding" from GO:0051287
* Deleted synonym "reduced NAD binding" from GO:0051287
* Deleted synonym "reduced nicotinamide adenine dinucleotide binding" from GO:0051287
* Changed definition of GO:0070306 from "The process whereby a relatively unspecialized cell acquires specialized features of a lens fiber cell, any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye. The cytoplasm of a lens ?ber cell is devoid of most intracellular organelles including the cell nucleus, and contains primarily crystallins, a group of water-soluble proteins expressed in very large quantities." to "The process whereby a relatively unspecialized cell acquires specialized features of a lens fiber cell, any of the elongated, tightly packed cells that make up the bulk of the mature lens in the camera-type eye. The cytoplasm of a lens fiber cell is devoid of most intracellular organelles including the cell nucleus, and contains primarily crystallins, a group of water-soluble proteins expressed in vary large quantities."
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