[Go-diff] GO update 01/14/2009

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Wed Jan 14 21:30:47 PST 2009


OBODIFF of gene_ontology_write.obo version 1.386 by 1.388

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0010862
* Populated new object GO:0010862 (macro)
  * Changed name of GO:0010862 from "<new term>" to "positive regulation of pathway-restricted SMAD protein phosphorylation"
  * Set definition of GO:0010862 to "Any process that increases the rate, frequency or extent of SMAD protein nuclear translocation. SMAD protein nuclear translocation is the vectorial transfer of a SMAD proteins from the cytoplasm into the nucleus, through the nuclear pore. Pathway-restricted SMAD proteins and common-partner SMAD proteins are involved in the transforming growth factor beta receptor signaling pathways."
  * Added definition dbxref GOC:dph to GO:0010862
  * Added definition dbxref GOC:tb to GO:0010862
  * Copied GO:0010862 to GO:0001934 with type OBO_REL:is_a
  * Copied GO:0010862 to GO:0060389 with type positively_regulates
  * Copied GO:0010862 to GO:0060393 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0010862
* Changed name of GO:0043006 from "calcium-dependent phospholipase A2 activation" to "calcium-dependent activation of phospholipase A2"
* Added synonym "calcium-dependent phospholipase A2 activation" to GO:0043006
* Added general dbxref GOC:tb to synonym calcium-dependent phospholipase A2 activation of GO:0043006
* Added general dbxref GOC:dph to synonym calcium-dependent phospholipase A2 activation of GO:0043006
* Changed synonym scope of GO:0043006 from "Related" to "Exact"
* Changed definition of GO:0060395 from "x." to "The cascade of processes by which a signal interacts with a receptor, causing a change in the activity of a SMAD protein, and ultimately effecting a change in the functioning of the cell."


More information about the Go-diff mailing list