[Go-diff] GO update 07/09/2009

Remote CVS for Gene Ontology gocvs at genome.stanford.edu
Thu Jul 9 21:30:59 PDT 2009 

OBODIFF of gene_ontology_write.obo version 1.703 by 1.707

Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0002146
* Created object of type obo:TERM with id GO:0002147
* Created object of type obo:TERM with id GO:0044101
* Created object of type obo:TERM with id GO:0044102
* Created object of type obo:TERM with id GO:0044103
* Created object of type obo:TERM with id GO:0044104
* Created object of type obo:TERM with id GO:0044105
* Created object of type obo:TERM with id GO:0070813
* Created object of type obo:TERM with id GO:0070814
* Created object of type obo:TERM with id GO:0070815
* Populated new object GO:0002146 (macro)
  * Changed name of GO:0002146 from "<new term>" to "steroid hormone receptor nuclear translocation"
  * Set definition of GO:0002146 to "The directed movement of a steroid hormone receptor into the nucleus."
  * Added definition dbxref GOC:hjd to GO:0002146
  * Copied GO:0002146 to GO:0000060 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0002146
* Populated new object GO:0002147 (macro)
  * Changed name of GO:0002147 from "<new term>" to "glucocorticoid receptor nuclear translocation"
  * Set definition of GO:0002147 to "The directed movement of a glucocorticoid receptor into the nucleus."
  * Added definition dbxref GOC:hjd to GO:0002147
  * Copied GO:0002147 to GO:0002146 with type OBO_REL:is_a
  * Copied GO:0002147 to GO:0042921 with type part_of
  * Assigned namespace "biological_process" to GO:0002147
* Populated new object GO:0044101 (macro)
  * Changed name of GO:0044101 from "<new term>" to "(R)-citramalyl-CoA lyase activity"
  * Set definition of GO:0044101 to "Catalysis of the reaction: (R)-citramalyl-CoA = pyruvate + acetyl-CoA."
  * Added definition dbxref GOC:jl to GO:0044101
  * Added definition dbxref IMG:03307 to GO:0044101
  * Added general dbxref EC:4.1.3.- to GO:0044101
  * Added general dbxref IMG:03307 to GO:0044101
  * Added general dbxref MetaCyc:CPLX-7553 to GO:0044101
  * Added GO:0044101 to category gosubset_prok
  * Added synonym "Ccl" to GO:0044101
  * Added synonym "R-citramalyl-CoA lyase activity" to GO:0044101
  * Changed synonym scope of GO:0044101 from "Related" to "Exact"
  * Copied GO:0044101 to GO:0016833 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0044101
* Populated new object GO:0044102 (macro)
  * Changed name of GO:0044102 from "<new term>" to "purine deoxyribosyltransferase activity"
  * Set definition of GO:0044102 to "Catalysis of deoxyribose exchange between purine deoxyribonucleoside as a donor and purine base as an acceptor."
  * Added definition dbxref GOC:jl to GO:0044102
  * Added definition dbxref IMG:03313 to GO:0044102
  * Added definition dbxref PMID:11836245 to GO:0044102
  * Added general dbxref EC:2.4.2.- to GO:0044102
  * Added general dbxref IMG:03313 to GO:0044102
  * Added GO:0044102 to category gosubset_prok
  * Added synonym "PTD" to GO:0044102
  * Added synonym "purine 2'-deoxyribosyltransferase activity" to GO:0044102
  * Changed synonym scope of GO:0044102 from "Related" to "Exact"
  * Copied GO:0044102 to GO:0016763 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0044102
* Populated new object GO:0044103 (macro)
  * Changed name of GO:0044103 from "<new term>" to "L-arabinose 1-dehydrogenase (NADP+) activity"
  * Set definition of GO:0044103 to "Catalysis of the reaction: L-arabinose + NADP+ = L-arabinono-1,4-lactone + NADPH + H+."
  * Added definition dbxref GOC:jl to GO:0044103
  * Added definition dbxref IMG:03333 to GO:0044103
  * Added general dbxref EC:1.1.1.- to GO:0044103
  * Added general dbxref IMG:03333 to GO:0044103
  * Added GO:0044103 to category gosubset_prok
  * Copied GO:0044103 to GO:0016616 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0044103
* Populated new object GO:0044104 (macro)
  * Changed name of GO:0044104 from "<new term>" to "2,5-dioxopentanoate dehydrogenase (NAD+) activity"
  * Set definition of GO:0044104 to "Catalysis of the reaction: 2,5-dioxopentanoate + NAD+ + H2O = 2-oxoglutarate + NADH + H+."
  * Added definition dbxref IMG:03338 to GO:0044104
  * Added definition dbxref PMID:16835232 to GO:0044104
  * Added definition dbxref PMID:17202142 to GO:0044104
  * Added general dbxref EC:1.2.1.- to GO:0044104
  * Added general dbxref IMG:03338 to GO:0044104
  * Added GO:0044104 to category gosubset_prok
  * Copied GO:0044104 to GO:0016620 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0044104
* Populated new object GO:0044105 (macro)
  * Changed name of GO:0044105 from "<new term>" to "L-xylulose reductase (NAD+) activity"
  * Set definition of GO:0044105 to "Catalysis of the reaction: xylitol + NAD+ = L-xylulose + NADH + H+."
  * Added definition dbxref IMG:03341 to GO:0044105
  * Added definition dbxref PMID:14736891 to GO:0044105
  * Added general dbxref EC:1.1.1.- to GO:0044105
  * Added general dbxref IMG:03341 to GO:0044105
  * Added GO:0044105 to category gosubset_prok
  * Copied GO:0044105 to GO:0016616 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0044105
* Populated new object GO:0070813 (macro)
  * Changed name of GO:0070813 from "<new term>" to "hydrogen sulfide metabolic process"
  * Set definition of GO:0070813 to "The chemical reactions and pathways involving hydrogen sulfide, H2S."
  * Added definition dbxref ChEBI:16136 to GO:0070813
  * Added definition dbxref GOC:mah to GO:0070813
  * Added synonym "hydrogen sulfide metabolism" to GO:0070813
  * Added general dbxref GOC:mah to synonym hydrogen sulfide metabolism of GO:0070813
  * Changed synonym scope of GO:0070813 from "Related" to "Exact"
  * Added synonym "hydrogen sulphide metabolic process" to GO:0070813
  * Added general dbxref GOC:mah to synonym hydrogen sulphide metabolic process of GO:0070813
  * Changed synonym scope of GO:0070813 from "Related" to "Exact"
  * Added synonym "hydrogen sulphide metabolism" to GO:0070813
  * Added general dbxref GOC:mah to synonym hydrogen sulphide metabolism of GO:0070813
  * Changed synonym scope of GO:0070813 from "Related" to "Exact"
  * Copied GO:0070813 to GO:0006790 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070813
* Populated new object GO:0070814 (macro)
  * Changed name of GO:0070814 from "<new term>" to "hydrogen sulfide biosynthetic process"
  * Set definition of GO:0070814 to "The chemical reactions and pathways resulting in the formation of hydrogen sulfide, H2S."
  * Added definition dbxref ChEBI:16136 to GO:0070814
  * Added definition dbxref GOC:mah to GO:0070814
  * Added synonym "hydrogen sulfide anabolism" to GO:0070814
  * Added general dbxref GOC:mah to synonym hydrogen sulfide anabolism of GO:0070814
  * Changed synonym scope of GO:0070814 from "Related" to "Exact"
  * Added synonym "hydrogen sulfide biosynthesis" to GO:0070814
  * Added general dbxref GOC:mah to synonym hydrogen sulfide biosynthesis of GO:0070814
  * Changed synonym scope of GO:0070814 from "Related" to "Exact"
  * Added synonym "hydrogen sulfide formation" to GO:0070814
  * Added general dbxref GOC:mah to synonym hydrogen sulfide formation of GO:0070814
  * Changed synonym scope of GO:0070814 from "Related" to "Exact"
  * Added synonym "hydrogen sulfide synthesis" to GO:0070814
  * Added general dbxref GOC:mah to synonym hydrogen sulfide synthesis of GO:0070814
  * Changed synonym scope of GO:0070814 from "Related" to "Exact"
  * Added synonym "hydrogen sulphide biosynthesis" to GO:0070814
  * Added general dbxref GOC:mah to synonym hydrogen sulphide biosynthesis of GO:0070814
  * Changed synonym scope of GO:0070814 from "Related" to "Exact"
  * Added synonym "hydrogen sulphide biosynthetic process" to GO:0070814
  * Added general dbxref GOC:mah to synonym hydrogen sulphide biosynthetic process of GO:0070814
  * Changed synonym scope of GO:0070814 from "Related" to "Exact"
  * Copied GO:0070814 to GO:0044272 with type OBO_REL:is_a
  * Copied GO:0070814 to GO:0070813 with type OBO_REL:is_a
  * Assigned namespace "biological_process" to GO:0070814
* Populated new object GO:0070815 (macro)
  * Changed name of GO:0070815 from "<new term>" to "peptidyl-lysine 5-dioxygenase activity"
  * Set definition of GO:0070815 to "Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 5-hydroxy-L-lysine + succinate + CO2."
  * Added definition dbxref PMID:19574390 to GO:0070815
  * Added synonym "lysine hydroxylase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym lysine hydroxylase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Broad"
  * Added synonym "lysine,2-oxoglutarate 5-dioxygenase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym lysine,2-oxoglutarate 5-dioxygenase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Broad"
  * Added synonym "lysine-2-oxoglutarate dioxygenase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym lysine-2-oxoglutarate dioxygenase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Broad"
  * Added synonym "lysyl hydroxylase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym lysyl hydroxylase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Broad"
  * Added synonym "peptide-lysine 5-dioxygenase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym peptide-lysine 5-dioxygenase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Exact"
  * Added synonym "peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase activity of GO:0070815
  * Added general dbxref EC:1.14.11.4 to synonym peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Exact"
  * Added synonym "peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase activity of GO:0070815
  * Added general dbxref EC:1.14.11.4 to synonym peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Exact"
  * Added synonym "protein lysine hydroxylase activity" to GO:0070815
  * Added general dbxref GOC:mah to synonym protein lysine hydroxylase activity of GO:0070815
  * Changed synonym scope of GO:0070815 from "Related" to "Exact"
  * Copied GO:0070815 to GO:0016706 with type OBO_REL:is_a
  * Assigned namespace "molecular_function" to GO:0070815
* Deleted GO:0000050 --OBO_REL:is_a--> GO:0009058
* Copied GO:0000050 to GO:0043604 with type OBO_REL:is_a
* Copied GO:0001408 to GO:0015860 with type OBO_REL:is_a
* Copied GO:0001572 to GO:0006688 with type OBO_REL:is_a
* Copied GO:0002047 to GO:0018130 with type OBO_REL:is_a
* Copied GO:0002047 to GO:0044271 with type OBO_REL:is_a
* Copied GO:0002047 to GO:0019438 with type OBO_REL:is_a
* Deleted GO:0002087 --OBO_REL:is_a--> GO:0043576
* Copied GO:0005984 to GO:0009311 with type OBO_REL:is_a
* Copied GO:0005986 to GO:0016138 with type OBO_REL:is_a
* Copied GO:0005992 to GO:0016138 with type OBO_REL:is_a
* Copied GO:0006023 to GO:0000271 with type OBO_REL:is_a
* Deleted GO:0006025 --OBO_REL:is_a--> GO:0006023
* Copied GO:0006025 to GO:0006024 with type OBO_REL:is_a
* Copied GO:0006031 to GO:0006023 with type OBO_REL:is_a
* Copied GO:0006055 to GO:0009226 with type OBO_REL:is_a
* Deleted GO:0006114 --OBO_REL:is_a--> GO:0046173
* Copied GO:0006114 to GO:0019401 with type OBO_REL:is_a
* Copied GO:0006139 to GO:0006807 with type OBO_REL:is_a
* Copied GO:0006167 to GO:0046129 with type OBO_REL:is_a
* Copied GO:0006171 to GO:0006164 with type OBO_REL:is_a
* Copied GO:0006172 to GO:0046129 with type OBO_REL:is_a
* Copied GO:0006177 to GO:0046129 with type OBO_REL:is_a
* Copied GO:0006182 to GO:0006164 with type OBO_REL:is_a
* Copied GO:0006183 to GO:0046129 with type OBO_REL:is_a
* Copied GO:0006222 to GO:0046132 with type OBO_REL:is_a
* Copied GO:0006225 to GO:0046132 with type OBO_REL:is_a
* Copied GO:0006228 to GO:0046132 with type OBO_REL:is_a
* Copied GO:0006241 to GO:0046132 with type OBO_REL:is_a
* Deleted GO:0006248 --OBO_REL:is_a--> GO:0042454
* Deleted GO:0006248 --OBO_REL:is_a--> GO:0046135
* Copied GO:0006248 to GO:0046133 with type OBO_REL:is_a
* Deleted GO:0006256 --OBO_REL:is_a--> GO:0042454
* Deleted GO:0006256 --OBO_REL:is_a--> GO:0046135
* Copied GO:0006256 to GO:0046133 with type OBO_REL:is_a
* Changed definition of GO:0006412 from "The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein." to "The cellular metabolic process by which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome."
* Copied GO:0006489 to GO:0008654 with type OBO_REL:is_a
* Copied GO:0006516 to GO:0030163 with type OBO_REL:is_a
* Copied GO:0006556 to GO:0042398 with type OBO_REL:is_a
* Copied GO:0006561 to GO:0018130 with type OBO_REL:is_a
* Copied GO:0006589 to GO:0046189 with type OBO_REL:is_a
* Copied GO:0006644 to GO:0019637 with type OBO_REL:is_a
* Deleted GO:0006646 --OBO_REL:is_a--> GO:0008654
* Copied GO:0006646 to GO:0046474 with type OBO_REL:is_a
* Deleted GO:0006663 --OBO_REL:is_a--> GO:0008654
* Copied GO:0006663 to GO:0046474 with type OBO_REL:is_a
* Copied GO:0006669 to GO:0008654 with type OBO_REL:is_a
* Copied GO:0006679 to GO:0006688 with type OBO_REL:is_a
* Copied GO:0006682 to GO:0006688 with type OBO_REL:is_a
* Copied GO:0006696 to GO:0016129 with type OBO_REL:is_a
* Changed name of GO:0006730 from "one-carbon compound metabolic process" to "one-carbon metabolic process"
* added secondary id GO:0019753 to GO:0006730
* added secondary id GO:0019754 to GO:0006730
* Changed definition of GO:0006730 from "The chemical reactions and pathways involving compounds containing a single carbon atom." to "The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states."
* Deleted definition dbxref GOC:ai from GO:0006730
* Added definition dbxref GOC:hjd to GO:0006730
* Added definition dbxref GOC:mah to GO:0006730
* Added definition dbxref GOC:pde to GO:0006730
* Deleted synonym "one carbon compound metabolic process" from GO:0006730
* Deleted synonym "one carbon compound metabolism" from GO:0006730
* Deleted synonym "one-carbon compound metabolism" from GO:0006730
* Added synonym "one carbon metabolic process" to GO:0006730
* Added general dbxref GOC:mah to synonym one carbon metabolic process of GO:0006730
* Changed synonym scope of GO:0006730 from "Related" to "Exact"
* Added synonym "one carbon metabolism" to GO:0006730
* Added general dbxref GOC:mah to synonym one carbon metabolism of GO:0006730
* Changed synonym scope of GO:0006730 from "Related" to "Exact"
* Added synonym "one-carbon metabolism" to GO:0006730
* Added general dbxref GOC:mah to synonym one-carbon metabolism of GO:0006730
* Changed synonym scope of GO:0006730 from "Related" to "Exact"
* Added synonym "one-carbon transfer metabolic process" to GO:0006730
* Added general dbxref GOC:mah to synonym one-carbon transfer metabolic process of GO:0006730
* Changed synonym scope of GO:0006730 from "Related" to "Exact"
* Added synonym "one-carbon transfer metabolism" to GO:0006730
* Added general dbxref GOC:mah to synonym one-carbon transfer metabolism of GO:0006730
* Changed synonym scope of GO:0006730 from "Related" to "Exact"
* Deleted GO:0006741 --OBO_REL:is_a--> GO:0019363
* Copied GO:0006741 to GO:0019359 with type OBO_REL:is_a
* Copied GO:0006743 to GO:0042180 with type OBO_REL:is_a
* Copied GO:0006747 to GO:0009165 with type OBO_REL:is_a
* Copied GO:0006750 to GO:0043043 with type OBO_REL:is_a
* Copied GO:0006750 to GO:0042398 with type OBO_REL:is_a
* Copied GO:0006754 to GO:0046129 with type OBO_REL:is_a
* Copied GO:0006761 to GO:0042559 with type OBO_REL:is_a
* Deleted GO:0006780 --OBO_REL:is_a--> GO:0009058
* Copied GO:0006780 to GO:0046394 with type OBO_REL:is_a
* Copied GO:0006846 to GO:0015711 with type OBO_REL:is_a
* Changed definition of GO:0007323 from "The generation of a mature, active peptide pheromone via processes unique to its processing and modification." to "The generation of a mature, active peptide pheromone via processes unique to its processing and modification. An example of this process is found in Saccharomyces cerevisiae."
* Deleted synonym "pheromone processing (sensu Saccharomyces)" from GO:0007323
* Deleted synonym "fertilization (sensu Metazoa)" from GO:0007338
* Changed definition of GO:0007349 from "The separation of a multi-nucleate cell or syncytium into individual cells." to "The separation of a multi-nucleate cell or syncytium into individual cells. An example of this is found in Drosophila melanogaster embryo development."
* Deleted synonym "cellularization (sensu Metazoa)" from GO:0007349
* Changed definition of GO:0007400 from "Process by which a cell becomes capable of differentiating autonomously into a neuroblast cell regardless of its environment; upon determination, the cell fate cannot be reversed." to "Process by which a cell becomes capable of differentiating autonomously into a neuroblast cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this process is found in Mus musculus."
* Deleted synonym "neuroblast fate determination (sensu Nematoda and Protostomia)" from GO:0007400
* Deleted synonym "neuroblast fate determination (sensu Vertebrata)" from GO:0007400
* Deleted synonym "glial cell fate determination (sensu Nematoda and Protostomia)" from GO:0007403
* Deleted synonym "neuroblast proliferation (sensu Nematoda and Protostomia)" from GO:0007405
* Deleted synonym "neuroblast proliferation (sensu Vertebrata)" from GO:0007405
* Deleted synonym "neuroblast activation (sensu Nematoda and Protostomia)" from GO:0007407
* Deleted synonym "neuroblast activation (sensu Vertebrata)" from GO:0007407
* Changed definition of GO:0007424 from "The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles." to "The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster."
* Deleted synonym "trachea development (sensu Insecta)" from GO:0007424
* Deleted synonym "tracheal system development (sensu Insecta)" from GO:0007424
* Added synonym "trachea development " to GO:0007424
* Changed synonym scope of GO:0007424 from "Related" to "Exact"
* Changed definition of GO:0007425 from "Process by which a cell becomes capable of differentiating autonomously into an epithelial cell within an open tracheal system regardless of its environment; upon determination, the cell fate cannot be reversed. Tracheal cells are set aside as 10 clusters of approximately 80 cells on each side of the embryo (termed tracheal placodes)." to "Process by which a cell becomes capable of differentiating autonomously into an epithelial cell within an open tracheal system regardless of its environment; upon determination, the cell fate cannot be reversed. Tracheal cells are set aside as 10 clusters of approximately 80 cells on each side of the embryo (termed tracheal placodes). An example of this is found in Drosophila melanogaster."
* Deleted synonym "tracheal cell fate determination (sensu Insecta)" from GO:0007425
* Deleted synonym "tracheal epithelial cell fate determination (sensu Insecta)" from GO:0007425
* Deleted synonym "tracheal placode cell fate determination (sensu Insecta)" from GO:0007425
* Added synonym "tracheal cell fate determination" to GO:0007425
* Changed synonym scope of GO:0007425 from "Related" to "Broad"
* Added synonym "tracheal epithelial cell fate determination" to GO:0007425
* Changed synonym scope of GO:0007425 from "Related" to "Exact"
* Added synonym "tracheal placode cell fate determination" to GO:0007425
* Changed definition of GO:0007426 from "The projection of branches of an open tracheal system towards their target tissues." to "The projection of branches of an open tracheal system towards their target tissues. An example of this is found in Drosophila melanogaster."
* Deleted synonym "tracheal outgrowth (sensu Insecta)" from GO:0007426
* Changed definition of GO:0007427 from "The orderly movement of epithelial cells during development of an open tracheal system." to "The orderly movement of epithelial cells during development of an open tracheal system. An example of this is found in Drosophila melanogaster."
* Deleted synonym "tracheal cell migration (sensu Insecta)" from GO:0007427
* Deleted synonym "tracheal epithelial cell migration (sensu Insecta)" from GO:0007427
* Added synonym "tracheal cell migration" to GO:0007427
* Changed synonym scope of GO:0007427 from "Related" to "Broad"
* Added synonym "tracheal epithelial cell migration" to GO:0007427
* Changed definition of GO:0007428 from "Formation of primary branches in the open tracheal system. These form from small groups of cells that migrate out at specific positions, organizing into tubes as they migrate." to "Formation of primary branches in the open tracheal system. These form from small groups of cells that migrate out at specific positions, organizing into tubes as they migrate. An example of this is found in Drosophila melanogaster."
* Deleted synonym "primary tracheal branching (sensu Insecta)" from GO:0007428
* Added synonym "primary tracheal branching" to GO:0007428
* Changed synonym scope of GO:0007428 from "Related" to "Exact"
* Changed definition of GO:0007429 from "Sprouting of secondary branches in an open tracheal system. These form from the tips of primary branches and are formed by individual cells that roll up into unicellular tubes." to "Sprouting of secondary branches in an open tracheal system. These form from the tips of primary branches and are formed by individual cells that roll up into unicellular tubes. An example of this is found in Drosophila melanogaster."
* Deleted synonym "secondary tracheal branching (sensu Insecta)" from GO:0007429
* Added synonym "secondary tracheal branching" to GO:0007429
* Changed synonym scope of GO:0007429 from "Related" to "Exact"
* Changed definition of GO:0007430 from "Formation of terminal branches in the open tracheal system. These are long cytoplasmic extensions that form fine tubules that transport oxygen directly to the tissues." to "Formation of terminal branches in the open tracheal system. These are long cytoplasmic extensions that form fine tubules that transport oxygen directly to the tissues. An example of the process is found in Drosophila melanogaster."
* Deleted synonym "terminal branching of trachea, cytoplasmic projection extension (sensu Insecta)" from GO:0007430
* Added synonym "terminal branching of trachea, cytoplasmic projection extension" to GO:0007430
* Changed synonym scope of GO:0007430 from "Related" to "Exact"
* Changed definition of GO:0007458 from "The morphogenetic furrow is a dorsoventral indentation which sweeps anteriorly across the eye disc. Ommatidia begin to form along the furrow, resulting in a graded series of ommatidial development across the anterior/posterior axis of the disc." to "The morphogenetic furrow is a dorsoventral indentation which sweeps anteriorly across the eye disc. Ommatidia begin to form along the furrow, resulting in a graded series of ommatidial development across the anterior/posterior axis of the disc. An example of this is found in Drosophila melanogaster."
* Deleted synonym "progression of morphogenetic furrow (sensu Endopterygota)" from GO:0007458
* Changed definition of GO:0007480 from "The process by which the anatomical structures of a leg derived from an imaginal disc are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands." to "The process by which the anatomical structures of a leg derived from an imaginal disc are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands. An example of this is found in Drosophila melanogaster."
* Deleted synonym "leg morphogenesis (sensu Endopterygota)" from GO:0007480
* Changed definition of GO:0007484 from "The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure." to "The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster."
* Deleted synonym "genital development (sensu Endopterygota)" from GO:0007484
* Deleted synonym "genitalia development (sensu Endopterygota)" from GO:0007484
* Added synonym "genital development" to GO:0007484
* Changed synonym scope of GO:0007484 from "Related" to "Broad"
* Changed definition of GO:0007485 from "The process whose specific outcome is the progression of the male genitalia over time, from formation as part of the genital disc to the mature structure." to "The process whose specific outcome is the progression of the male genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster."
* Deleted synonym "male genital development (sensu Endopterygota)" from GO:0007485
* Deleted synonym "male genitalia development (sensu Endopterygota)" from GO:0007485
* Added synonym "male genital development" to GO:0007485
* Changed synonym scope of GO:0007485 from "Related" to "Broad"
* Changed definition of GO:0007486 from "The process whose specific outcome is the progression of the female genitalia over time, from formation as part of the genital disc to the mature structure." to "The process whose specific outcome is the progression of the female genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster."
* Deleted synonym "female genital development (sensu Endopterygota)" from GO:0007486
* Deleted synonym "female genitalia development (sensu Endopterygota)" from GO:0007486
* Added synonym "female genital development" to GO:0007486
* Changed synonym scope of GO:0007486 from "Related" to "Broad"
* Deleted synonym "hemocyte development (sensu Arthropoda)" from GO:0007516
* Changed definition of GO:0007552 from "A biological process by which an animal physically develops after birth or hatching, involving a conspicuous and relatively abrupt change in the animal's form or structure. For example the change from tadpole to frog, and the change from larva to adult." to "A biological process by which an animal physically develops after birth or hatching, involving a conspicuous and relatively abrupt change in the animal's form or structure. For example the change from tadpole to frog, and the change from larva to adult. An example of this is found in Drosophila melanogaster."
* Deleted synonym "metamorphosis (sensu Amphibia)" from GO:0007552
* Deleted synonym "metamorphosis (sensu Insecta)" from GO:0007552
* Deleted synonym "cell aging (sensu Fungi)" from GO:0007569
* Deleted synonym "cell aging (sensu Saccharomyces)" from GO:0007569
* Deleted synonym "nucleolar fragmentation (sensu Saccharomyces)" from GO:0007576
* Deleted synonym "nucleolar size increase (sensu Saccharomyces)" from GO:0007576
* Changed definition of GO:0007591 from "The periodic shedding of part or all of a chitin-based cuticle, which is then replaced by a new cuticle." to "The periodic shedding of part or all of a chitin-based cuticle, which is then replaced by a new cuticle. An example of this is found in Drosophila melanogaster."
* Deleted synonym "molting cycle (sensu Insecta)" from GO:0007591
* Changed definition of GO:0007592 from "Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet." to "Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this is found in Caenorhabditis elegans."
* Deleted synonym "cuticle anabolism (sensu Protostomia and Nematoda)" from GO:0007592
* Deleted synonym "cuticle biosynthetic process (sensu Protostomia and Nematoda)" from GO:0007592
* Deleted synonym "cuticle formation (sensu Protostomia and Nematoda)" from GO:0007592
* Deleted synonym "cuticle synthesis (sensu Protostomia and Nematoda)" from GO:0007592
* Added synonym "cuticle anabolism" to GO:0007592
* Changed synonym scope of GO:0007592 from "Related" to "Broad"
* Added synonym "cuticle biosynthetic process" to GO:0007592
* Changed synonym scope of GO:0007592 from "Related" to "Broad"
* Added synonym "cuticle formation" to GO:0007592
* Changed synonym scope of GO:0007592 from "Related" to "Broad"
* Added synonym "cuticle synthesis" to GO:0007592
* Changed synonym scope of GO:0007592 from "Related" to "Broad"
* Deleted synonym "puparial glue (sensu Diptera)" from GO:0007594
* Added synonym "puparial glue" to GO:0007594
* Changed definition of GO:0008010 from "The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a larva." to "The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a larva. An example of this is found in Drosophila melanogaster."
* Deleted synonym "structural constituent of larval cuticle (sensu Insecta)" from GO:0008010
* Added synonym "structural constituent of larval cuticle" to GO:0008010
* Changed synonym scope of GO:0008010 from "Related" to "Broad"
* Changed definition of GO:0008011 from "The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a pupa." to "The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a pupa. An example of this is found in Drosophila melanogaster."
* Deleted synonym "structural constituent of pupal cuticle (sensu Insecta)" from GO:0008011
* Added synonym "structural constituent of pupal cuticle" to GO:0008011
* Changed synonym scope of GO:0008011 from "Related" to "Broad"
* Changed definition of GO:0008012 from "The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of an adult organism." to "The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of an adult organism. An example of this is found in Drosophila melanogaster."
* Deleted synonym "structural constituent of adult cuticle (sensu Insecta)" from GO:0008012
* Added synonym "structural constituent of adult cuticle" to GO:0008012
* Changed synonym scope of GO:0008012 from "Related" to "Broad"
* Changed definition of GO:0008049 from "The actions or reactions of a male, for the purpose of attracting a sexual partner." to "The actions or reactions of a male, for the purpose of attracting a sexual partner. An example of this process is found in Drosophila melanogaster."
* Deleted synonym "male courtship behavior (sensu Insecta)" from GO:0008049
* Deleted synonym "male courtship behaviour (sensu Insecta)" from GO:0008049
* Changed definition of GO:0008069 from "Polarization of the ovarian follicle cells along the dorsal/ventral axis." to "Polarization of the ovarian follicle cells along the dorsal/ventral axis. An example of this process is found in Drosophila melanogaster."
* Deleted synonym "dorsal/ventral axis determination, follicular epithelium (sensu Insecta)" from GO:0008069
* Added synonym "dorsal/ventral axis determination, follicular epithelium" to GO:0008069
* Changed definition of GO:0008071 from "Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by somatic cells." to "Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by somatic cells. An example of this process is found in Drosophila melanogaster."
* Deleted synonym "maternal determination of dorsal/ventral axis, follicular epithelium, soma encoded (sensu Insecta)" from GO:0008071
* Added synonym "maternal determination of dorsal/ventral axis, follicular epithelium, soma encoded" to GO:0008071
* Changed synonym scope of GO:0008071 from "Related" to "Broad"
* Changed definition of GO:0008103 from "Establishment and maintenance of an axis of polarity of the oocyte microtubule network such that the minus and plus ends of the microtubules of the mid stage oocyte are positioned along the anterior cortex and at the posterior pole, respectively." to "Establishment and maintenance of a specific axis of polarity of the oocyte microtubule network. The axis is set so that the minus and plus ends of the microtubules of the mid stage oocyte are positioned along the anterior cortex and at the posterior pole, respectively. An example of this is found in Drosophila melanogaster."
* Deleted synonym "oocyte microtubule cytoskeleton polarization (sensu Insecta)" from GO:0008103
* Changed definition of GO:0008316 from "The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg." to "The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg. An example of this is found in Drosophila melanogaster."
* Deleted synonym "structural constituent of vitelline membrane (sensu Insecta)" from GO:0008316
* Deleted synonym "glial cell migration (sensu Nematoda and Protostomia)" from GO:0008347
* Changed definition of GO:0008362 from "Synthesis, including the chemical reactions and pathways resulting in the formation of chitin and other components, and deposition of a chitin-based embryonic cuticle by the underlying epidermal epithelium. This tough, waterproof layer is essential to provide structural integrity of the larval body." to "Synthesis, including the chemical reactions and pathways resulting in the formation of chitin and other components, and deposition of a chitin-based embryonic cuticle by the underlying epidermal epithelium. This tough, waterproof cuticle layer is essential to provide structural integrity of the larval body. An example of this is found in Drosophila melanogaster."
* Deleted synonym "embryonic cuticle anabolism (sensu Insecta)" from GO:0008362
* Deleted synonym "embryonic cuticle biosynthetic process (sensu Insecta)" from GO:0008362
* Deleted synonym "embryonic cuticle formation (sensu Insecta)" from GO:0008362
* Deleted synonym "embryonic cuticle synthesis (sensu Insecta)" from GO:0008362
* Added synonym "embryonic cuticle anabolism" to GO:0008362
* Changed synonym scope of GO:0008362 from "Related" to "Broad"
* Added synonym "embryonic cuticle biosynthetic process" to GO:0008362
* Changed synonym scope of GO:0008362 from "Related" to "Broad"
* Added synonym "embryonic cuticle formation" to GO:0008362
* Changed synonym scope of GO:0008362 from "Related" to "Broad"
* Added synonym "embryonic cuticle synthesis" to GO:0008362
* Changed synonym scope of GO:0008362 from "Related" to "Broad"
* Changed definition of GO:0008363 from "Synthesis and deposition of a chitin-based larval cuticle. The insect larval cuticle is a secretion from epidermal cells that is shed at each molt." to "Synthesis and deposition of a chitin-based larval cuticle. The insect larval cuticle is a secretion from epidermal cells that is shed at each molt. An example of this is found in Drosophila melanogaster."
* Deleted synonym "larval cuticle anabolism (sensu Insecta)" from GO:0008363
* Deleted synonym "larval cuticle biosynthetic process (sensu Insecta)" from GO:0008363
* Deleted synonym "larval cuticle formation (sensu Insecta)" from GO:0008363
* Deleted synonym "larval cuticle synthesis (sensu Insecta)" from GO:0008363
* Added synonym "larval cuticle anabolism" to GO:0008363
* Changed synonym scope of GO:0008363 from "Related" to "Broad"
* Added synonym "larval cuticle biosynthetic process" to GO:0008363
* Changed synonym scope of GO:0008363 from "Related" to "Broad"
* Added synonym "larval cuticle formation" to GO:0008363
* Changed synonym scope of GO:0008363 from "Related" to "Broad"
* Added synonym "larval cuticle synthesis" to GO:0008363
* Changed synonym scope of GO:0008363 from "Related" to "Broad"
* Changed definition of GO:0008364 from "Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period." to "Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period. An example of this is found in Drosophila melanogaster."
* Deleted synonym "pupal cuticle anabolism (sensu Insecta)" from GO:0008364
* Deleted synonym "pupal cuticle formation (sensu Insecta)" from GO:0008364
* Deleted synonym "pupal cuticle synthesis (sensu Insecta)" from GO:0008364
* Added synonym "pupal cuticle anabolism" to GO:0008364
* Changed synonym scope of GO:0008364 from "Related" to "Broad"
* Added synonym "pupal cuticle formation" to GO:0008364
* Changed synonym scope of GO:0008364 from "Related" to "Broad"
* Added synonym "pupal cuticle synthesis" to GO:0008364
* Changed synonym scope of GO:0008364 from "Related" to "Broad"
* Changed synonym scope of GO:0008475 from "Exact" to "Broad"
* Deleted synonym "peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase activity" from GO:0008475
* Deleted synonym "peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase activity" from GO:0008475
* Deleted GO:0008475 --OBO_REL:is_a--> GO:0016706
* Copied GO:0008475 to GO:0070815 with type OBO_REL:is_a
* Changed definition of GO:0008540 from "The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex." to "The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex. An example of this is found in Mus musculus."
* Deleted synonym "proteasome regulatory particle, base subcomplex (sensu Eukaryota)" from GO:0008540
* Changed definition of GO:0008541 from "The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex." to "The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex. An example of this is found in Mus musculus."
* Deleted synonym "proteasome regulatory particle, lid subcomplex (sensu Eukaryota)" from GO:0008541
* Deleted synonym "secretin (sensu Bacteria)" from GO:0008565
* Added synonym "secretin" to GO:0008565
* Changed definition of GO:0008583 from "The process by which an undifferentiated cell acquires the features of a mystery cell. The mystery cells are a precluster of cells that emerge from the compound eye morphogenetic furrow, normally positioned between R3 and R4. They then disappear into the surrounding pool of undifferentiated cells and have no known fate in the mature ommatidium." to "The process by which an undifferentiated cell acquires the features of a mystery cell. The mystery cells are a precluster of cells that emerge from the compound eye morphogenetic furrow, normally positioned between R3 and R4. They then disappear into the surrounding pool of undifferentiated cells and have no known fate in the mature ommatidium. An example of this process is found in Drosophila melanogaster."
* Deleted synonym "mystery cell fate differentiation (sensu Endopterygota)" from GO:0008583
* Changed definition of GO:0008594 from "Morphogenesis of photoreceptors, sensory cells that react to the presence of light." to "Morphogenesis of photoreceptors, sensory cells that react to the presence of light. An example of this is found in Drosophila melanogaster."
* Deleted synonym "photoreceptor cell morphogenesis (sensu Endopterygota)" from GO:0008594
* Deleted synonym "photoreceptor development (sensu Drosophila)" from GO:0008594
* Added synonym "photoreceptor development" to GO:0008594
* Copied GO:0008652 to GO:0046394 with type OBO_REL:is_a
* Changed definition of GO:0009047 from "Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome." to "Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome. An example of this is found in Drosophila melanogaster."
* Deleted synonym "dosage compensation (sensu Insecta)" from GO:0009047
* Copied GO:0009102 to GO:0046394 with type OBO_REL:is_a
* Copied GO:0009102 to GO:0043604 with type OBO_REL:is_a
* Copied GO:0009105 to GO:0018130 with type OBO_REL:is_a
* Copied GO:0009105 to GO:0044272 with type OBO_REL:is_a
* Copied GO:0009105 to GO:0046394 with type OBO_REL:is_a
* Deleted GO:0009153 --OBO_REL:is_a--> GO:0009263
* Copied GO:0009153 to GO:0009265 with type OBO_REL:is_a
* Deleted GO:0009190 --OBO_REL:is_a--> GO:0009165
* Copied GO:0009190 to GO:0009124 with type OBO_REL:is_a
* Copied GO:0009209 to GO:0009148 with type OBO_REL:is_a
* Deleted GO:0009221 --OBO_REL:is_a--> GO:0009263
* Copied GO:0009221 to GO:0009265 with type OBO_REL:is_a
* Copied GO:0009224 to GO:0046132 with type OBO_REL:is_a
* Deleted GO:0009240 --OBO_REL:is_a--> GO:0044249
* Copied GO:0009240 to GO:0008654 with type OBO_REL:is_a
* Copied GO:0009245 to GO:0009247 with type OBO_REL:is_a
* Deleted GO:0009252 --OBO_REL:is_a--> GO:0034637
* Copied GO:0009252 to GO:0006024 with type OBO_REL:is_a
* Deleted GO:0009257 --OBO_REL:is_a--> GO:0009396
* Copied GO:0009257 to GO:0046654 with type OBO_REL:is_a
* Deleted synonym "cell wall anabolism (sensu Fungi)" from GO:0009272
* Deleted synonym "cell wall assembly (sensu Fungi)" from GO:0009272
* Deleted synonym "cell wall biosynthetic process (sensu Fungi)" from GO:0009272
* Deleted synonym "cell wall formation (sensu Fungi)" from GO:0009272
* Deleted synonym "cell wall synthesis (sensu Fungi)" from GO:0009272
* Added synonym "cell wall anabolism" to GO:0009272
* Changed synonym scope of GO:0009272 from "Related" to "Broad"
* Added synonym "cell wall assembly" to GO:0009272
* Changed synonym scope of GO:0009272 from "Related" to "Broad"
* Added synonym "cell wall biosynthetic process" to GO:0009272
* Changed synonym scope of GO:0009272 from "Related" to "Broad"
* Added synonym "cell wall formation" to GO:0009272
* Changed synonym scope of GO:0009272 from "Related" to "Broad"
* Added synonym "cell wall synthesis" to GO:0009272
* Changed synonym scope of GO:0009272 from "Related" to "Broad"
* Changed definition of GO:0009273 from "The chemical reactions and pathways resulting in the formation of the peptidoglycan-based cell wall." to "The chemical reactions and pathways resulting in the formation of the peptidoglycan-based cell wall. An example of this process is found in Escherichia coli."
* Changed synonym scope of GO:0009273 from "Related" to "Broad"
* Changed synonym scope of GO:0009273 from "Related" to "Broad"
* Deleted synonym "cell wall anabolism (sensu Bacteria)" from GO:0009273
* Deleted synonym "cell wall assembly (sensu Bacteria)" from GO:0009273
* Deleted synonym "cell wall biosynthetic process (sensu Bacteria)" from GO:0009273
* Deleted synonym "cell wall formation (sensu Bacteria)" from GO:0009273
* Deleted synonym "cell wall synthesis (sensu Bacteria)" from GO:0009273
* Added synonym "cell wall anabolism" to GO:0009273
* Changed synonym scope of GO:0009273 from "Related" to "Broad"
* Added synonym "cell wall assembly" to GO:0009273
* Changed synonym scope of GO:0009273 from "Related" to "Broad"
* Added synonym "cell wall biosynthetic process" to GO:0009273
* Changed synonym scope of GO:0009273 from "Related" to "Broad"
* Added synonym "cell wall formation" to GO:0009273
* Changed synonym scope of GO:0009273 from "Related" to "Broad"
* Added synonym "cell wall synthesis" to GO:0009273
* Changed synonym scope of GO:0009273 from "Related" to "Broad"
* Changed definition of GO:0009274 from "A protective structure outside the cytoplasmic membrane composed of peptidoglycan, a molecule made up of a glycan (sugar) backbone of repetitively alternating N-acetylglucosamine and N-acetylmuramic acid with short, attached, cross-linked peptide chains containing unusual amino acids; also called murein. As in, but not restricted to, the taxon Bacteria (Bacteria, ncbi_taxonomy_id:2)." to "A protective structure outside the cytoplasmic membrane composed of peptidoglycan, a molecule made up of a glycan (sugar) backbone of repetitively alternating N-acetylglucosamine and N-acetylmuramic acid with short, attached, cross-linked peptide chains containing unusual amino acids; also called murein. An example of this component is found in Escherichia coli."
* Deleted synonym "cell wall (sensu Bacteria)" from GO:0009274
* Deleted synonym "envelope (sensu Bacteria)" from GO:0009274
* Added synonym "envelope" to GO:0009274
* Changed synonym scope of GO:0009274 from "Related" to "Broad"
* Changed definition of GO:0009275 from "A layer of peptidoglycan found outside of the cytoplasmic membrane. The peptidoglycan is relatively thick (20-80nm) and retains the primary stain of the Gram procedure, thus cells appear blue after Gram stain. The cell walls often contain teichoic acids (acidic anionic polysaccharides) bound to the peptidoglycan. As in but not restricted to the Gram-positive bacteria." to "A layer of peptidoglycan found outside of the cytoplasmic membrane. The peptidoglycan is relatively thick (20-80nm) and retains the primary stain of the Gram procedure, thus cells appear blue after Gram stain. The cell walls often contain teichoic acids (acidic anionic polysaccharides) bound to the peptidoglycan. Examples of this component are found in Gram-positive bacteria."
* Deleted synonym "cell wall (sensu Firmicutes)" from GO:0009275
* Deleted synonym "cell wall (sensu Gram-positive Bacteria)" from GO:0009275
* Copied GO:0009398 to GO:0009156 with type OBO_REL:is_a
* Deleted GO:0009435 --OBO_REL:is_a--> GO:0019363
* Copied GO:0009435 to GO:0019359 with type OBO_REL:is_a
* Deleted GO:0009439 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0009440 --OBO_REL:is_a--> GO:0019754
* Changed definition of GO:0009503 from "A thylakoid membrane complex of chlorophylls a and b together with chlorophyll a-b binding proteins. In addition, LHCs contain a number of other proteins, the function of which is speculative, together with accessory pigments. The LHCs capture and transfer energy to photosystems I and II. As in, but not restricted to, green plants and algae (Viridiplantae, ncbi_taxonomy_id:33090)." to "A thylakoid membrane complex of chlorophylls a and b together with chlorophyll a-b binding proteins. In addition, LHCs contain a number of other proteins, the function of which is speculative, together with accessory pigments. The LHCs capture and transfer energy to photosystems I and II."
* Changed definition of GO:0009505 from "A more or less rigid stucture enclosing the protoplast of a cell and composed of cellulose and pectin and other organic and inorganic substances. As in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398)." to "A more or less rigid stucture enclosing the protoplast of a cell and composed of cellulose and pectin and other organic and inorganic substances."
* Changed definition of GO:0009664 from "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cellulose and pectin-containing cell wall; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398)." to "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cellulose and pectin-containing cell wall."
* Copied GO:0009684 to GO:0046394 with type OBO_REL:is_a
* Copied GO:0009688 to GO:0016106 with type OBO_REL:is_a
* Copied GO:0009710 to GO:0018130 with type OBO_REL:is_a
* Deleted GO:0009757 --OBO_REL:is_a--> GO:0009756
* Copied GO:0009757 to GO:0010182 with type OBO_REL:is_a
* Deleted GO:0009805 --OBO_REL:is_a--> GO:0019438
* Copied GO:0009805 to GO:0009699 with type OBO_REL:is_a
* Changed definition of GO:0009827 from "The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly. As in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398)." to "The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly."
* Changed definition of GO:0009828 from "The series of events causing chemical and structural alterations of an existing cellulose and pectin-containing cell wall that results in greater extensibility of the wall. As in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398)." to "The series of events causing chemical and structural alterations of an existing cellulose and pectin-containing cell wall that results in greater extensibility of the wall."
* Changed name of GO:0015834 from "peptidoglycan peptide transport" to "peptidoglycan-associated peptide transport"
* Added synonym "peptidoglycan peptide transport" to GO:0015834
* Added general dbxref GOC:mah to synonym peptidoglycan peptide transport of GO:0015834
* Changed synonym scope of GO:0015834 from "Related" to "Exact"
* Deleted GO:0015942 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0015943 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0015945 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0015947 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0015948 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0018893 --OBO_REL:is_a--> GO:0006805
* Deleted GO:0018894 --OBO_REL:is_a--> GO:0006805
* Deleted GO:0018901 --OBO_REL:is_a--> GO:0006805
* Deleted GO:0018952 --OBO_REL:is_a--> GO:0006805
* Deleted GO:0018980 --OBO_REL:is_a--> GO:0006805
* Deleted GO:0019339 --OBO_REL:is_a--> GO:0042178
* Set definition of GO:0019496 to "A one-carbon metabolic process in which acetyl-CoA is produced from formaldehyde and carbon dioxide."
* Added definition dbxref ISBN:0387961534 to GO:0019496
* Deleted GO:0019499 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0019500 --OBO_REL:is_a--> GO:0019754
* Deleted GO:0019753 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0019753 --OBO_REL:is_a--> GO:0044249
* Deleted GO:0015948 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0046202 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0015943 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0046169 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0046201 --OBO_REL:is_a--> GO:0019753
* Destroyed object GO:0019753
* Deleted GO:0019754 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0019754 --OBO_REL:is_a--> GO:0044248
* Deleted GO:0042183 --OBO_REL:is_a--> GO:0019754
* Deleted GO:0009440 --OBO_REL:is_a--> GO:0019754
* Deleted GO:0046170 --OBO_REL:is_a--> GO:0019754
* Deleted GO:0046188 --OBO_REL:is_a--> GO:0019754
* Deleted GO:0019500 --OBO_REL:is_a--> GO:0019754
* Destroyed object GO:0019754
* Changed definition of GO:0021873 from "The division of a neuroblast located in the forebrain. Neuroblast division gives rise to at least another neuroblast. As in, but not restricted to, the vertebrates (Vertebrata, ncbi_taxonomy_id:7742)." to "The division of a neuroblast located in the forebrain. Neuroblast division gives rise to at least another neuroblast."
* Removed GO:0030188 from category goslim_generic
* Removed GO:0030188 from category goslim_goa
* Removed GO:0030188 from category goslim_pir
* Removed GO:0030188 from category gosubset_prok
* Changed definition of GO:0030930 from "A protein complex composed of four identical subunits that possesses ADPG pyrophosphorylase activity; as in, but not restricted to, the Bacteria (Bacteria, ncbi_taxonomy_id:2)." to "A protein complex composed of four identical subunits that possesses ADPG pyrophosphorylase activity."
* Changed definition of GO:0030931 from "A protein complex composed of four different subunits that possesses ADPG pyrophosphorylase activity; as in, but not restricted to, the eukaryotes (Eukaryota, ncbi_taxonomy_id:2759)." to "A protein complex composed of four different subunits that possesses ADPG pyrophosphorylase activity."
* Changed definition of GO:0031504 from "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall; as in, but not restricted to, the taxon Bacteria (Bacteria, ncbi_taxonomy_id:2)." to "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall."
* Deleted GO:0033248 --OBO_REL:is_a--> GO:0031330
* Deleted GO:0034654 --OBO_REL:is_a--> GO:0044249
* Copied GO:0034654 to GO:0044271 with type OBO_REL:is_a
* Deleted GO:0034655 --OBO_REL:is_a--> GO:0044248
* Copied GO:0034655 to GO:0044270 with type OBO_REL:is_a
* Changed definition of GO:0035212 from "Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells. As in, but not restricted to, animals (Metazoa, ncbi_taxonomy_id:33208)." to "Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells."
* Deleted GO:0042183 --OBO_REL:is_a--> GO:0019754
* Copied GO:0042446 to GO:0009058 with type OBO_REL:is_a
* Copied GO:0042447 to GO:0009056 with type OBO_REL:is_a
* Changed definition of GO:0042774 from "The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP in the plasma membrane. As in, but not restricted to, the taxon Bacteria (Bacteria, ncbi_taxonomy_id:2)." to "The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP in the plasma membrane."
* Changed definition of GO:0042775 from "The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane; as in, but not restricted to, the eukaryotes (Eukaryota, ncbi_taxonomy_id:2759)." to "The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane."
* Copied GO:0043326 to GO:0051593 with type OBO_REL:is_a
* Deleted definition dbxref IMG:00356 from GO:0043841
* Added definition dbxref IMG:01546 to GO:0043841
* Added general dbxref IMG:01546 to GO:0043841
* Deleted GO:0044413 --OBO_REL:is_a--> GO:0051701
* Removed GO:0045045 from category goslim_pir
* Removed GO:0045045 from category gosubset_prok
* Changed definition of GO:0045284 from "A membrane-bound flavoenzyme complex consisting of four subunits, A, B, C, and D. A and B comprise the membrane-extrinsic catalytic domain and C (InterPro:003510; InterPro:00224) and D (InterPro:003418) link the catalytic centers to the electron-transport chain. In some species, the complex has only three subunits, and in these cases, there is only one membrane anchor instead of two. This family consists of the 13 kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalyzed by the related complex II of the respiratory chain (succinate dehydrogenase-(ubiquinone)). As in, but not restricted to, the taxon Bacteria (Bacteria, ncbi_taxonomy_id:2)." to "A membrane-bound flavoenzyme complex consisting of four subunits, A, B, C, and D. A and B comprise the membrane-extrinsic catalytic domain and C (InterPro:003510; InterPro:00224) and D (InterPro:003418) link the catalytic centers to the electron-transport chain. In some species, the complex has only three subunits, and in these cases, there is only one membrane anchor instead of two. This family consists of the 13 kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalyzed by the related complex II of the respiratory chain (succinate dehydrogenase-(ubiquinone))."
* Changed definition of GO:0045496 from "The process whose specific outcome is the progression of the analia of the male over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." to "The process whose specific outcome is the progression of the analia of the male over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc."
* Changed definition of GO:0045497 from "The process whose specific outcome is the progression of the analia of the female over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." to "The process whose specific outcome is the progression of the analia of the female over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc."
* Deleted GO:0045855 --OBO_REL:is_a--> GO:0048519
* Deleted GO:0046035 --OBO_REL:is_a--> GO:0009119
* Deleted GO:0046035 --OBO_REL:is_a--> GO:0006213
* Copied GO:0046035 to GO:0046131 with type OBO_REL:is_a
* Deleted GO:0046036 --OBO_REL:is_a--> GO:0009119
* Deleted GO:0046036 --OBO_REL:is_a--> GO:0006213
* Copied GO:0046036 to GO:0046131 with type OBO_REL:is_a
* Deleted GO:0046048 --OBO_REL:is_a--> GO:0009119
* Deleted GO:0046048 --OBO_REL:is_a--> GO:0006213
* Copied GO:0046048 to GO:0046131 with type OBO_REL:is_a
* Deleted GO:0046049 --OBO_REL:is_a--> GO:0009119
* Deleted GO:0046049 --OBO_REL:is_a--> GO:0006213
* Copied GO:0046049 to GO:0046131 with type OBO_REL:is_a
* Deleted GO:0046050 --OBO_REL:is_a--> GO:0046135
* Deleted GO:0046050 --OBO_REL:is_a--> GO:0042454
* Copied GO:0046050 to GO:0046133 with type OBO_REL:is_a
* Deleted GO:0046051 --OBO_REL:is_a--> GO:0009119
* Deleted GO:0046051 --OBO_REL:is_a--> GO:0006213
* Copied GO:0046051 to GO:0046131 with type OBO_REL:is_a
* Deleted GO:0046169 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0046170 --OBO_REL:is_a--> GO:0019754
* Deleted GO:0046188 --OBO_REL:is_a--> GO:0019754
* Deleted GO:0046201 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0046202 --OBO_REL:is_a--> GO:0019753
* Deleted GO:0046228 --OBO_REL:is_a--> GO:0042178
* Deleted GO:0046292 --OBO_REL:is_a--> GO:0006730
* Deleted GO:0046300 --OBO_REL:is_a--> GO:0042178
* Changed name of GO:0047777 from "citramalyl-CoA lyase activity" to "(3S)-citramalyl-CoA lyase activity"
* Added synonym "citramalyl-CoA lyase activity" to GO:0047777
* Changed synonym scope of GO:0047777 from "Related" to "Broad"
* Changed definition of GO:0048810 from "The process by which the anatomical structures of the analia of the female are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. Morphogenesis pertains to the creation of form. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." to "The process by which the anatomical structures of the analia of the female are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. Morphogenesis pertains to the creation of form."
* Changed definition of GO:0048811 from "The process by which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. Morphogenesis pertains to the creation of form. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." to "The process by which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. Morphogenesis pertains to the creation of form."
* Changed name of GO:0050022 from "L-arabinose 1-dehydrogenase activity" to "L-arabinose 1-dehydrogenase (NAD+) activity"
* Added synonym "L-arabinose 1-dehydrogenase activity" to GO:0050022
* Changed synonym scope of GO:0050022 from "Related" to "Broad"
* Changed name of GO:0050038 from "L-xylulose reductase activity" to "L-xylulose reductase (NADP+) activity"
* Added synonym "L-xylulose reductase activity" to GO:0050038
* Changed synonym scope of GO:0050038 from "Related" to "Broad"
* Added general dbxref IMG:03312 to GO:0070694
* Added GO:0070694 to category gosubset_prok
* Added synonym "deoxynucleoside 5'-monophosphate N-glycosidase activity" to GO:0070694
* Changed synonym scope of GO:0070694 from "Related" to "Exact"

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