[Go-diff] GO update 05/29/2009
Remote CVS for Gene Ontology
gocvs at genome.stanford.edu
Fri May 29 21:30:54 PDT 2009
OBODIFF of gene_ontology_write.obo version 1.623 by 1.625
Starting obodiff at /share/go/bin/oboedit/current using 256M of memory
* Created object of type obo:TERM with id GO:0060643
* Created object of type obo:TERM with id GO:0060644
* Created object of type obo:TERM with id GO:0060645
* Created object of type obo:TERM with id GO:0060646
* Created object of type obo:TERM with id GO:0060647
* Created object of type obo:TERM with id GO:0060648
* Created object of type obo:TERM with id GO:0060649
* Created object of type obo:TERM with id GO:0060650
* Created object of type obo:TERM with id GO:0060651
* Created object of type obo:TERM with id GO:0060652
* Created object of type obo:TERM with id GO:0060653
* Created object of type obo:TERM with id GO:0060654
* Created object of type obo:TERM with id GO:0060655
* Created object of type obo:TERM with id GO:0060656
* Created object of type obo:TERM with id GO:0060657
* Created object of type obo:TERM with id GO:0060658
* Created object of type obo:TERM with id GO:0060659
* Created object of type obo:TERM with id GO:0060660
* Created object of type obo:TERM with id GO:0070669
* Created object of type obo:TERM with id GO:0070670
* Created object of type obo:TERM with id GO:0070671
* Created object of type obo:TERM with id GO:0070672
* Created object of type obo:TERM with id GO:0070673
* Created object of type obo:TERM with id GO:0070674
* Created object of type obo:TERM with id GO:0070675
* Created object of type obo:TERM with id GO:0070676
* Created object of type obo:TERM with id GO:0070677
* Created object of type obo:TERM with id GO:0070678
* Created object of type obo:TERM with id GO:0070679
* Populated new object GO:0060643 (macro)
* Changed name of GO:0060643 from "<new term>" to "epithelial cell differentiation involved in mammary gland bud morphogenesis"
* Set definition of GO:0060643 to "The process by which a cell of the mammary placode becomes a cell of the mammary gland bud."
* Added definition dbxref GOC:dph to GO:0060643
* Copied GO:0060643 to GO:0060615 with type part_of
* Copied GO:0060643 to GO:0060644 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060643
* Populated new object GO:0060644 (macro)
* Changed name of GO:0060644 from "<new term>" to "mammary gland epithelial cell differentiation"
* Set definition of GO:0060644 to "The process by which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland."
* Added definition dbxref GOC:dph to GO:0060644
* Copied GO:0060644 to GO:0030879 with type part_of
* Copied GO:0060644 to GO:0030855 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060644
* Populated new object GO:0060645 (macro)
* Changed name of GO:0060645 from "<new term>" to "peripheral mammary gland bud epithelial cell differentiation"
* Set definition of GO:0060645 to "The process by which a relatively unspecialized epithelial cell of the mammary placode becomes an epithelial cell at the periphery of the mammary gland bud. Cells at the periphery of the bud are larger that those of the surrounding epithelium and are arranged concentrically."
* Added definition dbxref GOC:dph to GO:0060645
* Added definition dbxref PMID:12558599 to GO:0060645
* Copied GO:0060645 to GO:0060643 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060645
* Populated new object GO:0060646 (macro)
* Changed name of GO:0060646 from "<new term>" to "internal mammary gland bud epithelial cell differentiation"
* Set definition of GO:0060646 to "The process by which a relatively unspecialized epithelial cell of the mammary placode becomes an internal epithelial cell of the mammary gland bud. Internal cells are small and of irregular shape."
* Added definition dbxref GOC:dph to GO:0060646
* Added definition dbxref PMID:12558599 to GO:0060646
* Copied GO:0060646 to GO:0060643 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060646
* Populated new object GO:0060647 (macro)
* Changed name of GO:0060647 from "<new term>" to "mesenchymal cell condensation involved in mammary fat development"
* Set definition of GO:0060647 to "The cell adhesion process by which mammary mesenchyme cells adhere to one another in the initial stages of the formation of mammary fat development."
* Added definition dbxref GOC:dph to GO:0060647
* Added definition dbxref PMID:12558599 to GO:0060647
* Copied GO:0060647 to GO:0016337 with type OBO_REL:is_a
* Copied GO:0060647 to GO:0060611 with type part_of
* Assigned namespace "biological_process" to GO:0060647
* Populated new object GO:0060648 (macro)
* Changed name of GO:0060648 from "<new term>" to "mammary gland bud morphogenesis"
* Set definition of GO:0060648 to "The process by which anatomical structures of the mammary gland buds are generated and organized. Mammary gland buds form by an outpocketing of the mammary placodes and grow to invade the mammary fat, when they form the mammary cord."
* Added definition dbxref GOC:dph to GO:0060648
* Added definition dbxref PMID:12558599 to GO:0060648
* Copied GO:0060648 to GO:0060603 with type part_of
* Copied GO:0060648 to GO:0060572 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060648
* Populated new object GO:0060649 (macro)
* Changed name of GO:0060649 from "<new term>" to "mammary gland bud elongation"
* Set definition of GO:0060649 to "The process by which the mammary gland bud grows along its axis."
* Added definition dbxref GOC:dph to GO:0060649
* Added definition dbxref PMID:12558599 to GO:0060649
* Copied GO:0060649 to GO:0060648 with type part_of
* Copied GO:0060649 to GO:0060560 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060649
* Populated new object GO:0060650 (macro)
* Changed name of GO:0060650 from "<new term>" to "epithelial cell proliferation involved in mammary gland bud elongation"
* Set definition of GO:0060650 to "The multiplication or reproduction of mammary gland bud epithelial cells, resulting in the elongation of the bud."
* Added definition dbxref GOC:dph to GO:0060650
* Added definition dbxref PMID:12558599 to GO:0060650
* Copied GO:0060650 to GO:0060649 with type part_of
* Copied GO:0060650 to GO:0033598 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060650
* Populated new object GO:0060651 (macro)
* Changed name of GO:0060651 from "<new term>" to "regulation of epithelial cell proliferation involved in mammary gland bud elongation"
* Set definition of GO:0060651 to "Any process that modulates the frequency, rate or extent of mammary gland bud epithelial cell proliferation that results in the elongation of the bud."
* Added definition dbxref GOC:dph to GO:0060651
* Added definition dbxref PMID:12558599 to GO:0060651
* Copied GO:0060651 to GO:0060650 with type regulates
* Copied GO:0060651 to GO:0033599 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060651
* Populated new object GO:0060652 (macro)
* Changed name of GO:0060652 from "<new term>" to "mammary gland cord morphogenesis"
* Set definition of GO:0060652 to "The process by which anatomical structures of the mammary gland cord are generated and organized. Mammary gland cords form when the mammary gland bud invades the mammary fat."
* Added definition dbxref GOC:dph to GO:0060652
* Added definition dbxref PMID:12558599 to GO:0060652
* Added synonym "mammary gland sprout morphogenesis" to GO:0060652
* Added general dbxref GOC:dph to synonym mammary gland sprout morphogenesis of GO:0060652
* Changed synonym scope of GO:0060652 from "Related" to "Exact"
* Copied GO:0060652 to GO:0002009 with type OBO_REL:is_a
* Copied GO:0060652 to GO:0060603 with type part_of
* Assigned namespace "biological_process" to GO:0060652
* Populated new object GO:0060653 (macro)
* Changed name of GO:0060653 from "<new term>" to "epithelial cell differentiation involved in mammary gland cord morphogenesis"
* Set definition of GO:0060653 to "The process by which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland cord. Epithelial cells of the mammary cord give it its funnel-like shape and some are cornified."
* Added definition dbxref GOC:dph to GO:0060653
* Added definition dbxref PMID:12558599 to GO:0060653
* Added synonym "epithelial cell differentiation involved in mammary gland sprout morphogenesis" to GO:0060653
* Added general dbxref GOC:dph to synonym epithelial cell differentiation involved in mammary gland sprout morphogenesis of GO:0060653
* Copied GO:0060653 to GO:0060652 with type part_of
* Copied GO:0060653 to GO:0060644 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060653
* Populated new object GO:0060654 (macro)
* Changed name of GO:0060654 from "<new term>" to "mammary gland cord elongation"
* Set definition of GO:0060654 to "The process by which the mammary gland sprout grows along its axis."
* Added definition dbxref GOC:dph to GO:0060654
* Added definition dbxref PMID:12558599 to GO:0060654
* Copied GO:0060654 to GO:0060602 with type OBO_REL:is_a
* Copied GO:0060654 to GO:0060652 with type part_of
* Assigned namespace "biological_process" to GO:0060654
* Populated new object GO:0060655 (macro)
* Changed name of GO:0060655 from "<new term>" to "branching involved in mammary gland cord morphogenesis"
* Set definition of GO:0060655 to "The process by which the branching structure of the mammary gland cord is generated and organized. The mammary gland cord is a solid epithelial structure that will hollow out, forming the mammary duct."
* Added definition dbxref GOC:dph to GO:0060655
* Added definition dbxref PMID:12558599 to GO:0060655
* Copied GO:0060655 to GO:0060444 with type OBO_REL:is_a
* Copied GO:0060655 to GO:0060652 with type part_of
* Assigned namespace "biological_process" to GO:0060655
* Populated new object GO:0060656 (macro)
* Changed name of GO:0060656 from "<new term>" to "regulation of branching involved in mammary cord morphogenesis by fat precursor cell-epithelial cell signaling"
* Set definition of GO:0060656 to "Any process that modulates the rate, frequency, or extent of branching of the mammary gland cord as a result of a signal being created by a mammary fat precursor cell and its subsequent reception and interpretation by a mammary cord epithelial cell."
* Added definition dbxref GOC:dph to GO:0060656
* Added definition dbxref PMID:12558599 to GO:0060656
* Copied GO:0060656 to GO:0022603 with type OBO_REL:is_a
* Copied GO:0060656 to GO:0007267 with type OBO_REL:is_a
* Copied GO:0060656 to GO:0060655 with type regulates
* Assigned namespace "biological_process" to GO:0060656
* Populated new object GO:0060657 (macro)
* Changed name of GO:0060657 from "<new term>" to "regulation of mammary gland cord elongation by mammary fat precursor cell-epithelial cell signaling"
* Set definition of GO:0060657 to "Any process that modulates the rate, frequency, or extent of mammary gland cord elongation as a result of a signal being created by a mesenchymal cell that is a precursor to the mammary fat and its subsequent reception and interpretation by an mammary cord epithelial cell."
* Added definition dbxref GOC:dph to GO:0060657
* Added definition dbxref PMID:12558599 to GO:0060657
* Copied GO:0060657 to GO:0060654 with type regulates
* Copied GO:0060657 to GO:0007267 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060657
* Populated new object GO:0060658 (macro)
* Changed name of GO:0060658 from "<new term>" to "nipple morphogenesis"
* Set definition of GO:0060658 to "The process by which the nipple is generated and organized. Morphogenesis pertains to the creation of form."
* Added definition dbxref GOC:dph to GO:0060658
* Copied GO:0060658 to GO:0060618 with type part_of
* Copied GO:0060658 to GO:0009653 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060658
* Populated new object GO:0060659 (macro)
* Changed name of GO:0060659 from "<new term>" to "nipple sheath formation"
* Set definition of GO:0060659 to "The developmental process pertaining to the initial formation of the nipple sheath from the unspecified epidermis. This process begins with a circular ingrowth of the epidermis around the region of the mammary sprout. It ends before the region begins to elevate."
* Added definition dbxref GOC:dph to GO:0060659
* Added definition dbxref PMID:12558599 to GO:0060659
* Copied GO:0060659 to GO:0048646 with type OBO_REL:is_a
* Copied GO:0060659 to GO:0060658 with type part_of
* Assigned namespace "biological_process" to GO:0060659
* Populated new object GO:0060660 (macro)
* Changed name of GO:0060660 from "<new term>" to "epidermis morphogenesis involved in nipple formation"
* Set definition of GO:0060660 to "The process by which the epidermis of the nipple sheath is uplifted to form an umbrella-like projection."
* Added definition dbxref GOC:dph to GO:0060660
* Added definition dbxref PMID:12558599 to GO:0060660
* Copied GO:0060660 to GO:0060658 with type part_of
* Copied GO:0060660 to GO:0048730 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0060660
* Populated new object GO:0070669 (macro)
* Changed name of GO:0070669 from "<new term>" to "response to interleukin-2"
* Set definition of GO:0070669 to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-2 stimulus."
* Added definition dbxref GOC:mah to GO:0070669
* Added synonym "response to IL-2" to GO:0070669
* Added general dbxref GOC:mah to synonym response to IL-2 of GO:0070669
* Changed synonym scope of GO:0070669 from "Related" to "Exact"
* Copied GO:0070669 to GO:0034097 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070669
* Populated new object GO:0070670 (macro)
* Changed name of GO:0070670 from "<new term>" to "response to interleukin-4"
* Set definition of GO:0070670 to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus."
* Added definition dbxref GOC:mah to GO:0070670
* Added synonym "response to IL-4" to GO:0070670
* Added general dbxref GOC:mah to synonym response to IL-4 of GO:0070670
* Changed synonym scope of GO:0070670 from "Related" to "Exact"
* Copied GO:0070670 to GO:0034097 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070670
* Populated new object GO:0070671 (macro)
* Changed name of GO:0070671 from "<new term>" to "response to interleukin-12"
* Set definition of GO:0070671 to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus."
* Added definition dbxref GOC:mah to GO:0070671
* Added synonym "response to IL-12" to GO:0070671
* Added general dbxref GOC:mah to synonym response to IL-12 of GO:0070671
* Changed synonym scope of GO:0070671 from "Related" to "Exact"
* Copied GO:0070671 to GO:0034097 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070671
* Populated new object GO:0070672 (macro)
* Changed name of GO:0070672 from "<new term>" to "response to interleukin-15"
* Set definition of GO:0070672 to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus."
* Added definition dbxref GOC:mah to GO:0070672
* Added synonym "response to IL-15" to GO:0070672
* Added general dbxref GOC:mah to synonym response to IL-15 of GO:0070672
* Changed synonym scope of GO:0070672 from "Related" to "Exact"
* Copied GO:0070672 to GO:0034097 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070672
* Populated new object GO:0070673 (macro)
* Changed name of GO:0070673 from "<new term>" to "response to interleukin-18"
* Set definition of GO:0070673 to "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus."
* Added definition dbxref GOC:mah to GO:0070673
* Added synonym "response to IL-18" to GO:0070673
* Added general dbxref GOC:mah to synonym response to IL-18 of GO:0070673
* Changed synonym scope of GO:0070673 from "Related" to "Exact"
* Copied GO:0070673 to GO:0034097 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070673
* Populated new object GO:0070674 (macro)
* Changed name of GO:0070674 from "<new term>" to "hypoxanthine dehydrogenase activity"
* Set definition of GO:0070674 to "Catalysis of the reaction: hypoxanthine + NAD+ + H2O = xanthine + NADH + H+."
* Added definition dbxref GOC:mah to GO:0070674
* Added definition dbxref GOC:pde to GO:0070674
* Added GO:0070674 to category gosubset_prok
* Added synonym "hypoxanthine oxidoreductase activity" to GO:0070674
* Added general dbxref EC:1.17.1.4 to synonym hypoxanthine oxidoreductase activity of GO:0070674
* Changed synonym scope of GO:0070674 from "Related" to "Broad"
* Added synonym "hypoxanthine-NAD oxidoreductase activity" to GO:0070674
* Added general dbxref EC:1.17.1.4 to synonym hypoxanthine-NAD oxidoreductase activity of GO:0070674
* Changed synonym scope of GO:0070674 from "Related" to "Exact"
* Added synonym "hypoxanthine/NAD(+) oxidoreductase activity" to GO:0070674
* Added general dbxref EC:1.17.1.4 to synonym hypoxanthine/NAD(+) oxidoreductase activity of GO:0070674
* Changed synonym scope of GO:0070674 from "Related" to "Exact"
* Added synonym "hypoxanthine/NAD+ oxidoreductase activity" to GO:0070674
* Added general dbxref EC:1.17.1.4 to synonym hypoxanthine/NAD+ oxidoreductase activity of GO:0070674
* Changed synonym scope of GO:0070674 from "Related" to "Exact"
* Added synonym "hypoxanthine:NAD+ oxidoreductase activity" to GO:0070674
* Added general dbxref EC:1.17.1.4 to synonym hypoxanthine:NAD+ oxidoreductase activity of GO:0070674
* Changed synonym scope of GO:0070674 from "Related" to "Exact"
* Added synonym "NAD-hypoxanthine dehydrogenase activity" to GO:0070674
* Added general dbxref EC:1.17.1.4 to synonym NAD-hypoxanthine dehydrogenase activity of GO:0070674
* Changed synonym scope of GO:0070674 from "Related" to "Exact"
* Copied GO:0070674 to GO:0016726 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070674
* Populated new object GO:0070675 (macro)
* Changed name of GO:0070675 from "<new term>" to "hypoxanthine oxidase activity"
* Set definition of GO:0070675 to "Catalysis of the reaction: hypoxanthine + H2O + O2 = xanthine + H2O2."
* Added definition dbxref GOC:mah to GO:0070675
* Added definition dbxref GOC:pde to GO:0070675
* Added GO:0070675 to category gosubset_prok
* Added synonym "hypoxanthine-xanthine oxidase activity" to GO:0070675
* Added general dbxref EC:1.17.3.2 to synonym hypoxanthine-xanthine oxidase activity of GO:0070675
* Changed synonym scope of GO:0070675 from "Related" to "Broad"
* Added synonym "hypoxanthine:O(2) oxidoreductase activity" to GO:0070675
* Added general dbxref EC:1.17.3.2 to synonym hypoxanthine:O(2) oxidoreductase activity of GO:0070675
* Changed synonym scope of GO:0070675 from "Related" to "Exact"
* Added synonym "hypoxanthine:O2 oxidoreductase activity" to GO:0070675
* Added general dbxref EC:1.17.3.2 to synonym hypoxanthine:O2 oxidoreductase activity of GO:0070675
* Changed synonym scope of GO:0070675 from "Related" to "Exact"
* Added synonym "hypoxanthine:oxygen oxidoreductase activity" to GO:0070675
* Added general dbxref EC:1.17.3.2 to synonym hypoxanthine:oxygen oxidoreductase activity of GO:0070675
* Changed synonym scope of GO:0070675 from "Related" to "Exact"
* Added synonym "schardinger enzyme" to GO:0070675
* Added general dbxref EC:1.17.3.2 to synonym schardinger enzyme of GO:0070675
* Added synonym "Schardinger enzyme activity" to GO:0070675
* Added general dbxref EC:1.17.3.2 to synonym Schardinger enzyme activity of GO:0070675
* Added synonym "xanthine oxidoreductase activity" to GO:0070675
* Added general dbxref EC:1.17.3.2 to synonym xanthine oxidoreductase activity of GO:0070675
* Changed synonym scope of GO:0070675 from "Related" to "Broad"
* Copied GO:0070675 to GO:0016727 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070675
* Populated new object GO:0070676 (macro)
* Changed name of GO:0070676 from "<new term>" to "intralumenal vesicle formation"
* Set definition of GO:0070676 to "The evagination of the endosome membrane, resulting in the formation of a vesicle."
* Added definition dbxref GOC:jp to GO:0070676
* Added definition dbxref PMID:19234443 to GO:0070676
* Added synonym "endosome membrane budding" to GO:0070676
* Added general dbxref GOC:mah to synonym endosome membrane budding of GO:0070676
* Added general dbxref GOC:jp to synonym endosome membrane budding of GO:0070676
* Changed synonym scope of GO:0070676 from "Related" to "Exact"
* Copied GO:0070676 to GO:0006900 with type OBO_REL:is_a
* Assigned namespace "biological_process" to GO:0070676
* Populated new object GO:0070677 (macro)
* Changed name of GO:0070677 from "<new term>" to "rRNA (cytosine-2'-O-)-methyltransferase activity"
* Set definition of GO:0070677 to "Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methylcytosine."
* Added definition dbxref GOC:mah to GO:0070677
* Added definition dbxref PMID:19400805 to GO:0070677
* Added general dbxref EC:2.1.1.- to GO:0070677
* Added GO:0070677 to category gosubset_prok
* Copied GO:0070677 to GO:0008171 with type OBO_REL:is_a
* Copied GO:0070677 to GO:0016434 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070677
* Populated new object GO:0070678 (macro)
* Changed name of GO:0070678 from "<new term>" to "preprotein binding"
* Set definition of GO:0070678 to "Interacting selectively with a preprotein, the unprocessed form of a protein destined to undergo co- or post-translational processing."
* Added definition dbxref GOC:imk to GO:0070678
* Added definition dbxref GOC:mah to GO:0070678
* Added definition dbxref PMID:12914940 to GO:0070678
* Added synonym "unprocessed protein binding" to GO:0070678
* Added general dbxref GOC:imk to synonym unprocessed protein binding of GO:0070678
* Changed synonym scope of GO:0070678 from "Related" to "Exact"
* Copied GO:0070678 to GO:0005515 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070678
* Populated new object GO:0070679 (macro)
* Changed name of GO:0070679 from "<new term>" to "inositol 1,4,5 trisphosphate binding"
* Set definition of GO:0070679 to "Interacting selectively with inositol 1,4,5 trisphosphate."
* Added definition dbxref GOC:mah to GO:0070679
* Added GO:0070679 to category gosubset_prok
* Added synonym "InsP3 binding" to GO:0070679
* Added general dbxref GOC:mah to synonym InsP3 binding of GO:0070679
* Changed synonym scope of GO:0070679 from "Related" to "Exact"
* Added synonym "IP3 binding" to GO:0070679
* Added general dbxref GOC:mah to synonym IP3 binding of GO:0070679
* Changed synonym scope of GO:0070679 from "Related" to "Exact"
* Copied GO:0070679 to GO:0043178 with type OBO_REL:is_a
* Assigned namespace "molecular_function" to GO:0070679
* Added synonym "ssDNA-specific endodeoxyribonuclease activity" to GO:0000014
* Added general dbxref GOC:mah to synonym ssDNA-specific endodeoxyribonuclease activity of GO:0000014
* Changed synonym scope of GO:0000014 from "Related" to "Exact"
* Changed name of GO:0001658 from "ureteric bud branching" to "branching involved in ureteric bud morphogenesis"
* Changed definition of GO:0001658 from "Branching of the ureteric bud." to "The process by which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the mesonephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules."
* Added synonym "ureteric bud branching" to GO:0001658
* Added general dbxref GOC:dph to synonym ureteric bud branching of GO:0001658
* Changed synonym scope of GO:0001658 from "Related" to "Exact"
* Deleted synonym "tRNA thioudridylase" from GO:0002144
* Added synonym "tRNA thiouridylase" to GO:0002144
* Changed synonym scope of GO:0002144 from "Related" to "Broad"
* Added synonym "ssDNA binding" to GO:0003697
* Added general dbxref GOC:mah to synonym ssDNA binding of GO:0003697
* Changed synonym scope of GO:0003697 from "Related" to "Exact"
* Added synonym "ssRNA binding" to GO:0003727
* Added general dbxref GOC:mah to synonym ssRNA binding of GO:0003727
* Changed synonym scope of GO:0003727 from "Related" to "Exact"
* Deleted synonym "hypoxanthine oxidase activity" from GO:0004855
* Changed synonym scope of GO:0004855 from "Exact" to "Broad"
* Deleted synonym "hypoxanthine:oxygen oxidoreductase activity" from GO:0004855
* Changed synonym scope of GO:0004855 from "Exact" to "Related"
* Changed name of GO:0005220 from "inositol 1,4,5-triphosphate-sensitive calcium-release channel activity" to "inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity"
* Set definition of GO:0005220 to "Catalysis of the transmembrane transfer of a calcium ion by a channel that opens when inositol 1,4,5-trisphosphate has been bound by the channel complex or one of its constituent parts."
* Added definition dbxref GOC:mah to GO:0005220
* Added definition dbxref PMID:8660280 to GO:0005220
* Changed name of GO:0005547 from "phosphatidylinositol-3,4,5-triphosphate binding" to "phosphatidylinositol-3,4,5-trisphosphate binding"
* Changed definition of GO:0005547 from "Interacting selectively with phosphatidylinositol-3,4,5-triphosphate, the triphosphorylated derivative of phosphatidylinositol." to "Interacting selectively with phosphatidylinositol-3,4,5-trisphosphate, the triply phosphorylated derivative of phosphatidylinositol."
* Deleted GO:0005979 --OBO_REL:is_a--> GO:0031326
* Deleted GO:0005979 --OBO_REL:is_a--> GO:0010675
* Deleted GO:0006282 --OBO_REL:is_a--> GO:0048583
* Deleted GO:0006644 --OBO_REL:is_a--> GO:0006643
* Copied GO:0006644 to GO:0044255 with type OBO_REL:is_a
* Changed name of GO:0008095 from "inositol-1,4,5-triphosphate receptor activity" to "inositol-1,4,5-trisphosphate receptor activity"
* Changed definition of GO:0008095 from "Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity." to "Combining with inositol-1,4,5-trisphosphate to initiate a change in cell activity."
* Added synonym "ssDNA-specific exodeoxyribonuclease activity" to GO:0008297
* Added general dbxref GOC:mah to synonym ssDNA-specific exodeoxyribonuclease activity of GO:0008297
* Changed synonym scope of GO:0008297 from "Related" to "Exact"
* Added synonym "ssDNA-specific 3'-5' exodeoxyribonuclease activity" to GO:0008310
* Added general dbxref GOC:mah to synonym ssDNA-specific 3'-5' exodeoxyribonuclease activity of GO:0008310
* Changed synonym scope of GO:0008310 from "Related" to "Exact"
* Deleted GO:0008654 --OBO_REL:is_a--> GO:0046467
* Copied GO:0008654 to GO:0008610 with type OBO_REL:is_a
* Deleted GO:0009395 --OBO_REL:is_a--> GO:0046466
* Copied GO:0009395 to GO:0044242 with type OBO_REL:is_a
* Deleted GO:0010219 --OBO_REL:is_a--> GO:0048583
* Deleted GO:0016249 --part_of--> GO:0051179
* Added synonym "ssDNA-dependent ATP-dependent DNA helicase activity" to GO:0017116
* Added general dbxref GOC:mah to synonym ssDNA-dependent ATP-dependent DNA helicase activity of GO:0017116
* Changed synonym scope of GO:0017116 from "Related" to "Exact"
* Added synonym "ssDNA-dependent ATP-dependent DNA helicase complex" to GO:0017117
* Added general dbxref GOC:mah to synonym ssDNA-dependent ATP-dependent DNA helicase complex of GO:0017117
* Changed synonym scope of GO:0017117 from "Related" to "Exact"
* Deleted GO:0030100 --OBO_REL:is_a--> GO:0051049
* Added synonym "mammogenesis" to GO:0030879
* Added general dbxref GOC:dph to synonym mammogenesis of GO:0030879
* Changed synonym scope of GO:0030879 from "Related" to "Narrow"
* Deleted GO:0031338 --OBO_REL:is_a--> GO:0051049
* Deleted GO:0031347 --OBO_REL:is_a--> GO:0048583
* Changed name of GO:0031586 from "negative regulation of inositol-1,4,5-triphosphate receptor activity" to "negative regulation of inositol-1,4,5-trisphosphate receptor activity"
* Changed name of GO:0031587 from "positive regulation of inositol-1,4,5-triphosphate receptor activity" to "positive regulation of inositol-1,4,5-trisphosphate receptor activity"
* Deleted GO:0031887 --OBO_REL:is_a--> GO:0007018
* Deleted GO:0032949 --OBO_REL:is_a--> GO:0031326
* Deleted GO:0032951 --OBO_REL:is_a--> GO:0031326
* Deleted GO:0033035 --OBO_REL:is_a--> GO:0031028
* Copied GO:0033035 to GO:0048037 with type OBO_REL:is_a
* Added synonym "telomeric ssDNA binding" to GO:0043047
* Added general dbxref GOC:mah to synonym telomeric ssDNA binding of GO:0043047
* Changed synonym scope of GO:0043047 from "Related" to "Exact"
* Deleted GO:0043516 --OBO_REL:is_a--> GO:0048583
* Added synonym "ssDNA-specific 5'-3' exodeoxyribonuclease activity" to GO:0045145
* Added general dbxref GOC:mah to synonym ssDNA-specific 5'-3' exodeoxyribonuclease activity of GO:0045145
* Changed synonym scope of GO:0045145 from "Related" to "Exact"
* Added synonym "functional differentiation" to GO:0048469
* Added general dbxref GOC:dph to synonym functional differentiation of GO:0048469
* Deleted GO:0060295 --OBO_REL:is_a--> GO:0032886
* Added synonym "regulation of telomeric ssDNA binding" to GO:0060380
* Added general dbxref GOC:mah to synonym regulation of telomeric ssDNA binding of GO:0060380
* Changed synonym scope of GO:0060380 from "Related" to "Exact"
* Added synonym "positive regulation of telomeric ssDNA binding" to GO:0060381
* Added general dbxref GOC:mah to synonym positive regulation of telomeric ssDNA binding of GO:0060381
* Changed synonym scope of GO:0060381 from "Related" to "Exact"
* Changed definition of GO:0060572 from "The morphogenetic process by which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet." to "The morphogenetic process by which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding."
* Deleted GO:0060572 --OBO_REL:is_a--> GO:0002009
* Copied GO:0060572 to GO:0060571 with type OBO_REL:is_a
* Deleted GO:0060603 --OBO_REL:is_a--> GO:0009653
* Copied GO:0060603 to GO:0060562 with type OBO_REL:is_a
* Added synonym "milk duct cavitation" to GO:0060604
* Added general dbxref GOC:dph to synonym milk duct cavitation of GO:0060604
* Deleted GO:0060615 --OBO_REL:is_a--> GO:0060572
* Deleted GO:0060615 --part_of--> GO:0060603
* Copied GO:0060615 to GO:0060648 with type part_of
* Copied GO:0060615 to GO:0048646 with type OBO_REL:is_a
* Changed definition of GO:0060616 from "The process by which the mammary gland cord. The cord forms by elongation of the mammary bud." to "The process by which the mammary gland cord forms by elongation of the mammary bud. The cord is formed once the elongating bud breaks through the mesenchyme and reaches the fat pad."
* Deleted GO:0060616 --part_of--> GO:0060603
* Copied GO:0060616 to GO:0060652 with type part_of
* Deleted GO:0060618 --OBO_REL:is_a--> GO:0030879
* Copied GO:0060618 to GO:0048856 with type OBO_REL:is_a
* Copied GO:0060618 to GO:0030879 with type part_of
* Deleted GO:0060622 --OBO_REL:is_a--> GO:0032950
* Changed definition of GO:0060638 from "Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell." to "Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted."
* Changed definition of GO:0070648 from "An actin filament bundle that consists of short filaments
organized into bundles of uniform polarity, and is nucleated by formins. In fungal cells, myosin motors transport cargo along actin cables toward sites of polarized cell growth; actin cables may play a similar role in pollen tube growth." to "An actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins. In fungal cells, myosin motors transport cargo along actin cables toward sites of polarized cell growth; actin cables may play a similar role in pollen tube growth."
* Deleted GO:0070652 --OBO_REL:is_a--> GO:0043234
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