[go] AmiGO beta announcement

[Gwinn Giglio, Michelle]

Hi,

I'm not sure the gosubset_prok should be listed as a slim - its not really a
slim - its just the whole GO with euk specific terms subtracted out.  It's
really nothing like a slim.

I have a prok GO slim that I built recently.  At some point I wasn't sure
how/where to submit it and I asked about it and then discussion ensued and
then I got distracted with other things.  Now I can't remember if I brought
it with me from TIGR but I should be able to get it.

Michelle



On 12/18/07 3:16 PM, "Seth Carbon" <sjcarbon at berkeleybop.org> wrote:

> 
> On Tue, 2007-12-18 at 10:06 +0000, Michael Ashburner wrote:
>> Why are some, but not all, GO slims hyperlinked ?
> 
> The short answer is that there is a limit on the size of subsets that
> can be reasonably manipulated in AmiGO at this point. In the case of the
> what is in the database so far, gosubset_prok falls outside this limit
> and is not linkable (so gosubset_prok is the odd one out).
> 
>> Looking at the PIR slim in Treeview I got this when invited to try
>> "compact view of the graph":
>>     *  fatal message   AmiGO could not find any terms to perform your
>> query upon. Please go back and select one or more terms.
> 
> We have fixed this bug.
> 
> Thanks for the feedback!
> 
> Cheers,
> 
> -Seth
> 
>