[go] AmiGO beta announcement

[Benjamin Hitz]

The Last updated date at the footer of every page shows when the  
database (terms, associations, and sequences) was loaded.
I agree it could be more obvious.

Ben

> Seth (and others who contributed),
>
> This is really great! It's clean and straightforward. I am still  
> playing around with it but like what I'm seeing. I tried the term  
> enrichment tool. It should provide which set of annotations it is  
> using and which version of the GO it is using, maybe right at the  
> top of the results. At some point we may want an option to  
> incorporate the ortholog annotations into this, but I think that's  
> down the road.
>
> Did we ever decide to incorporate your term suggestion tool into  
> AMIGO? I can't remember where that was supposed to go.
>
> I'll let you know if I have more comments as I do more.
>
> David
>
> Seth Carbon wrote:
>> GO Listers,
>>
>> New features that you may want to look for and/or test in the AmiGO
>> beta:
>>
>> *) Term Enrichment tool (accessible from the button/link at the  
>> top of
>> every page).
>>
>> *) GO Slimmer tool (also accessible from the button/link at the  
>> top of
>> every page).
>>
>> *) New Advanced Search page.
>>
>> *) Searches are now more intelligent (will work harder to get the
>> answers that you probably want).
>>
>> *) Searches are now sorted by relevance.
>>
>> *) The pie charts have been replaced with bar graphs.
>>
>> *) Improved download options (more formats more places).
>>
>> *) Improved user interface (all over the place).
>>
>> Cheers,
>>
>> -Seth
>>
>>
>> On Mon, 2007-12-17 at 15:34 -0800, Seth Carbon wrote:
>>
>>> GO Listers,
>>>
>>> The next version of AmiGO is in the final stages and we felt that  
>>> now
>>> would be a good time to open it up to those outside the working  
>>> group.
>>>
>>> For those of you interested in trying and testing out the new  
>>> version of
>>> AmiGO, the main testing server is located at:
>>>
>>> http://goweb-dev.stanford.edu/cgi-bin/amigo/go.cgi
>>>
>>> Questions, comments, and bug reports should be directed to the Web
>>> Presence Working Group:
>>>
>>>
>>>
>>> web-presence-working-group at genome.stanford.edu
>>>
>>> In addition, the testing server at Berkeley is refreshed several  
>>> times a
>>> day from CVS and changes made in response to bug reports can be  
>>> seen as
>>> they are patched:
>>>
>>> http://toy.lbl.gov:9012/cgi-bin/amigo/go.cgi
>>>
>>> Cheers,
>>>
>>> -Seth
>>>
>>>
>>>
>>>
>>
>>

--
Ben Hitz
Senior Scientific Programmer ** Saccharomyces Genome Database ** GO  
Consortium
Stanford University ** hitz at genome.stanford.edu