[Go] Gene Symbols as GO synonyms

Judith Blake jblake at informatics.jax.org
Fri Apr 4 09:18:30 PDT 2008


Great idea Ben,

so in the quick search, the default might be selecting 'all' rather than 
GO term or Gene Product buttons.

then the results would be sorted first by GO term and then by Gene 
Product terms

and synonyms would be searched.

Judy

Ben Hitz wrote:
> Clearly they should not be synonyms of terms.   The issue (with amigo) 
> is that the term and gene product searches are run separately (for 
> performance reasons).   What would "solve" the problem is to combine 
> the basic search, so that if you type in "p53" you get a list of 
> gene_products, and it should be relatively obvious how to get to the 
> correct terms from there.
>
> Ben
> -- 
> Ben Hitz
> Senior Scientific Programmer ** Saccharomyces Genome Database ** GO 
> Consortium
> Stanford University ** hitz at genome.stanford.edu
>
>
>


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