[Go] Ontology development - March highlights

[Suzanna Lewis]

Thanks for the report Midori and David.

Nice choices for the pilot project with the process-to-function links.  
We'll be discussing the required relation(s) at the upcoming RO  
meeting in Denver and David, Chris and Tanya will be there to make  
sure it's right in the RO.

-S

On Apr 1, 2008, at 6:32 AM, Midori Harris wrote:

> Dear GO,
>
> The most recent monthly report on ontology content, for March 2008,  
> is now
> available at:
>
>   http://gocwiki.geneontology.org/index.php/Mar2008_report
>
> Ontology development highlights from March:
>
>  * The 'regulates' relationships have gone live! They are now used  
> in the
> gene_ontology*.obo files and will be visible in AmiGO very soon (if  
> they
> aren't already). Many thanks to all who helped with this work,  
> especially
> David, Tanya and Chris.
>
>  * We're down to one live 'sensu' term, and it will be changed  
> before the
> GOC meeting (main wiki page:
> http://gocwiki.geneontology.org/index.php/Sensu_Main_Page; outstanding
> items: http://gocwiki.geneontology.org/index.php/Meeting_Notes_3).
>
>  * Reorganization of electron transport terms has been implemented
> (http://wiki.geneontology.org/index.php/Electron_transport).
>
>  * Two pilot projects are under way, one on electron transport and the
> other on glycolysis and the TCA cycle, to document links between  
> function
> terms and process terms. Function-process main page:
> http://wiki.geneontology.org/index.php/Function-Process_Links.
>
>  * An overhaul of signal transduction process terms has begun
> (http://wiki.geneontology.org/index.php/Signaling).
>
> In April, the function-process pilot projects will continue, as will  
> the
> signaling overhaul and quality control work connected with the  
> regulation
> terms. We also hope to implement changes stemming from the lung
> development content meeting
> (http://wiki.geneontology.org/index.php/Lung_Development).
>
> There are several content-related items proposed for the GOC meeting
> agenda
> (http://wiki.geneontology.org/index.php/SLC_GO_Consortium_Meeting#Agenda_Items 
> ).
>
> As usual, details of small- and medium-scale changes are available  
> in the
> SourceForge Curator Requests tracker. Please contact us if you want  
> to help out
> with ontology work in a particular area, or if you have any comments  
> or
> questions about what's going on.
>
> Ontology Development wiki:
> http://wiki.geneontology.org/index.php/Ontology_Development
>
> SourceForge Curator Requests tracker:
> https://sourceforge.net/tracker/?group_id=36855&atid=440764
>
> Midori & David
> on behalf of GO's ontology developers
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>