[Go] [go] annotations for refgenomes

Mike Cherry cherry at stanford.edu
Thu Feb 28 14:50:24 PST 2008


Beware of Hack, no guarantee is assumed or implied.

Look in go/software/utilities/ for

   referencegenomemetrics-with-root.pl
   refgenomemetrics-with-root.csh

Run refgenomemetrics-with-root.csh from the go directory, it will  
gzcat the gene association files and pipe the output to  
referencegenomemetrics-with-root.pl

Enjoy,
Mike

On Feb 28, 2008, at 12:58 PM, Suzanna Lewis wrote:

> Ah, a challenge ;-)
>
> Sure, send us both the code. Better yet, please commit it to the  
> repository. We need to run this regularly to be able to report  
> progress and it is a useful tool to have in the toolkit.
>
> -S
>
> On Feb 28, 2008, at 12:24 PM, Mike Cherry wrote:
>
>> I'm happy to send the script that makes the data used to generate  
>> the graph to anyone that wants it.  For my purpose the original  
>> graph is perfect.
>>
>> -Mike
>>
>>



More information about the Go mailing list