[Go] ontology editing freeze lifted
Karen Christie
kchris at genome.stanford.edu
Wed Mar 26 15:11:04 PDT 2008
Hi,
In light of the fact that Chris's recent email to go-friends says that the
CVS changes "will go into effect within the next few weeks, and will be
announced on this list."
and that the README for the go/ontology/editors/ directory says this:
"The current contents are frozen, and should be treated as a
placeholder/test and NOT USED in production"
I have a question:
Which file is currently the one to be edited?
the old one at go/ontology/gene_ontology_edit.obo
OR
the new one at go/ontology/editors/gene_ontology_write.obo
If it's the latter then the README in the editors directory needs to be
edited to contain up-to-date info, and also a correct file name (currently
lists "gene_ontology_live.obo" but not "gene_ontology_write.obo".
confusedly yours,
-Karen
On Tue, 25 Mar 2008, Jennifer Deegan (nee Clark) wrote:
> Hi,
>
> So that everybody can start to enjoy the new improvements to the file,
> the changes have now been manually propagated through to
> gene_ontology_edit.obo. This means that they will reach the ftp server
> in half an hour, and gene_ontology.obo tomorrow.
>
> Midori is going to keep propagating the changes like this using a manual
> commit once a day until the scripts are in place at SGD.
>
> Thanks,
>
> Jen
>
>
>
>
>
>
> --
> Jennifer Deegan (nee Clark)
> EMBL-European Bioinformatics Institute
> Gene Ontology Consortium
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