[Go] decision on Re: Alert: proposal to obsolete GO:0034423

Midori Harris midori at ebi.ac.uk
Wed May 7 05:06:00 PDT 2008


Dear GO,

Comments made in response to this proposal have led to the decision that 
GO:0034423 will not be made obsolete. Thanks to Chris for stating the case 
for its inclusion. I've added a comment to help avoid misleading 
annotations.

Midori

On Tue, 6 May 2008, Midori Harris wrote:

> The proposal has been made to obsolete
>
>   autophagic vacuole lumen ; GO:0034424
>
> This term is not used in annotations, and is not included in any subset
> maintained in GO.
>
> The reason is that this term was requested, but the request has been
> rescinded upon further discussion. The autophagic vacuole does have a
> lumen, but no gene products are known to reside and act there normally;
> rather, the lumen is more like a "trash can" where molecules temporarily
> reside before being degraded.
>
> SF link:
> https://sourceforge.net/tracker/?func=detail&atid=440764&aid=1954235&group_id=36855
>
> Because the term was added only a few days ago, and has been used only for
> one mapping (that will be removed, as agreed in the SF discussion), it
> will be made obsolete in two days.
>
> *** Unless objections are received by May 8,
>       we will assume that you agree to this change. ***
>
> Midori
>
>
>
>
>
>
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