[Go] question about using NOT qualifier
Valerie Wood
val at sanger.ac.uk
Sat Jul 25 02:26:54 PDT 2009
Hi Debby,
This is caused by an incorrect mapping to Interpro domain IPR001757.
this should be reported on the annotation tracker:
http://sourceforge.net/tracker/?atid=605890&group_id=36855&func=browse
and will be removed
Val
Debby Siegele wrote:
> I have a question about using the 'NOT' qualifier in cases where an
> electronic annotation appears to be wrong. The specific case is I
> found E. coli proteins (e.g. YbhA and SerB) are annotated to
> GO:0015662 'ATPase activity, coupled to transmembrane movement of
> ions, phosphorylative mechanism.' I think this electronic annotation
> was made because these proteins and P-type ATPases share a common
> catalytic domain, but YbhA and SerB aren't membrane proteins and don't
> have any of the other conserved domains found in P-type ATPases. How
> do I indicate what the 'NOT' is based on?
>
> Thanks,
>
> Debby
>
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