[Go] recent change, "maternal behavior" relationship to "parental behavior"?
John Matese
jcmatese at genomics.princeton.edu
Tue Jun 23 08:39:54 PDT 2009
Addendum: this term is also in the wrong namespace?
[Term]
id: GO:0060747
name: oral incubation
namespace: cellular_component
def: "A parental behavior in which fertilized eggs are taken into the
mouth and held until hatching." [GOC:dph]
is_a: GO:0060746 ! parental behavior
On Jun 23, 2009, at 11:33 AM, John Matese wrote:
> Hi,
>
> One of our tools (Generic GO Term Mapper), is currently
> nonfunctional, and our current best guess is that it may be problem
> with the ontology?
> Error message contains :
> "There is an error in the obo file, where the relationship between
> GO:0042711 and one or more of its parents is not correctly defined.
> Please check the obo file. The program is unable to continue."
>
> When I check the OBO file we have downloaded, I see that
>
>
> [Term]
> id: GO:0042711
> name: maternal behavior
> namespace: biological_process
> def: "Female behaviors associated with the care and rearing of
> offspring." [GOC:curators]
> exact_synonym: "maternal behaviour" []
> is_a: GO:0060746 ! parental behavior
>
>
> [Term]
> id: GO:0060746
> name: parental behavior
> namespace: cellular_component
> def: "A reproductive behavior in which a parent cares for and rears
> offspring." [GOC:dph]
> is_a: GO:0033057 ! reproductive behavior in a multicellular organism
>
>
> I don't see parental behavior in AmiGO and parental behavior appears
> to be in the wrong aspect?
>
> Just letting you know,
> John
>
>
>
> John Matese
> Director, PUMAdb
> jcmatese at genomics.princeton.edu
>
>
>
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