[Go] Ontology development - February highlights

Suzanna Lewis suzi at berkeleybop.org
Mon Mar 2 08:55:56 PST 2009


woohoo! congrats to everyone for getting "regulates" on the air.

sounds like a busy month.

On Mar 2, 2009, at 5:45 AM, Midori Harris wrote:

> Dear GO,
>
> The most recent monthly report on ontology content, for February  
> 2009, is now available at:
>
>  http://wiki.geneontology.org/index.php/Feb2009_ontdev_report
>
> Ontology development highlights from February:
>
>  * The big news this month is that 'regulates' links have gone live  
> within the molecular function ontology, and between the molecular  
> function and biological process ontologies (see http://wiki.geneontology.org/index.php/FP-regulates 
> ; more will be added to the wiki soon).
>
>  * We've continued reviewing internal cross-products, i.e. cross- 
> products where both the genus and differentiae are GO terms, with  
> the aim of making the first ones live a few weeks after the  
> 'regulates' links between function and process go in (see http://wiki.geneontology.org/index.php/Category:Cross_Products 
>  and http://wiki.geneontology.org/index.php/Editors_cross-product_implementation_plan 
> , plus individual pages in the Cross_Products category).
>
>  * Plans for cross-products (as well as the recently released  
> regulates links) are available at http://wiki.geneontology.org/index.php/GO_Timeline
>
>  * The work on signal transduction terms is still going on, and now  
> includes plans for a content meeting (http://wiki.geneontology.org/index.php/Signaling 
> ).
>
>  * Planning has begun for a small content meeting on electron  
> transport, organized by Rob Gunsalus and Jen Deegan.
>
>  * The paper on the muscle content meeting has been published:
> http://www.ncbi.nlm.nih.gov/pubmed/19178689?dopt=Abstract
> http://www.biomedcentral.com/1755-8794/2/6
>
>  * We also do ongoing work on quality control work connected with  
> the regulation terms and for terms with more than one part_of parent  
> (http://wiki.geneontology.org/index.php/Ontology_Quality_Control).
>
> As usual, details of small- and medium-scale changes are available  
> in the SourceForge Curator Requests tracker. Please contact us if  
> you want to help out with ontology work in a particular area, or if  
> you have any comments or questions about what's going on.
>
> Ontology Development wiki:
> http://wiki.geneontology.org/index.php/Ontology_Development
>
> SourceForge Curator Requests tracker:
> https://sourceforge.net/tracker/?group_id=36855&atid=440764
>
> Midori & David
> on behalf of GO's ontology developers
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