[Go] Change for GOA UniProtKB GAF file.

Mike Cherry cherry at stanford.edu
Thu May 7 14:54:05 PDT 2009


This afternoon the software group agreed to changing how we store the  
goa_uniprot GAF file.  The large file will still be removed from CVS.   
This is okay because the file is too big for CVS and cannot currently  
be retrieved.  This file will still be available via to GO FTP and  
from the EBI FTP.  Both the submitted and filtered goa_uniprot files  
will be removed from CVS.  A new filtered file will be created that  
has all the IEA annotations removed and this file will be in the CVS  
repository.  Suggestions for this new file's name are welcome, we were  
thinking of : gene_association.goa_uniprot_noiea.gz

Removing the files from CVS will happen almost immediately as  
mentioned above you cannot get it from CVS anyway.  The older version  
of the goa_uniprot file are available from the EBI FTP site.  The  
files will still be available via HTTP and FTP at  
www.geneontology.org.  This change simply means they will not be  
obtainable via a checkout from CVS.  I'll work on creating the new  
noiea file and add it to CVS next week.

-Mike



More information about the Go mailing list